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Biomedical subjects

A Lebedev

Publications and source records attributed to A Lebedev.

At least 19 recordsLinked to original sources
PubMed2001

EXAFS study of PbS-SnS solid solution.

The local environment of the Pb atom in Pb(x)Sn(1-x)S solid solution was studied by EXAFS technique. The shortest Pb-S bond length in orthorhombic samples was found to be by approximately 0.2 A shorter than in cubic PbS. This indicates that the 6s2 lone pair of Pb is stereochemically active in the SnS host. Strong correlations found in the distribution of metal atoms in the second shell show that the orthorhombic samples can be considered as solid solutions with unexpectedly strong short-range order. One can expect that the short-range order in PbSnS2 may result in formation of superstructures with space groups C(7)2v or C(2)2v.

Journal Article↗
PubMed2001

Application of three-dimensional resonant acoustic spectroscopy method to rock and building materials.

This paper presents the experimental and theoretical results of applying resonant acoustic spectroscopy (RAS) to determine elastic parameters and losses in such consolidated granular materials as rock and building bricks. First, the theoretical aspects of the RAS method are outlined. A computer code for the rectangular and cylindrical samples was developed and tested. The results of experiments on specimens of rock and ceramic brick are then described. Finally, a modification of the previously published RUS algorithm is presented which permits a significant reduction in computing time for elongated samples.

Journal Article↗
PubMed1999

Detection and typing of human papillomavirus in cervical carcinomas in Russian women: a prognostic study.

BACKGROUND: The correlation between human papillomavirus (HPV) infection and tumor prognosis in 159 Russian women with cervical carcinoma was investigated. The presence of various HPV types was correlated with the histologic parameters of the carcinomas and with their immunoreactivity with antibodies to p53, Ki-67-Ag, and bcl-2. METHODS: Formalin fixed, paraffin embedded tissue specimens representing 159 cases of International Federation of Gynecology and Obstetrics Stage I and II were used. HPV DNA was detected by polymerase chain reaction (PCR) using a general primer set that targets the L1 region and synthesizes a product of only 65 base pairs. The HPV types were determined by direct sequencing and compared with known HPV types. RESULTS: All 159 carcinomas were positive for HPV. HPV 16 (64.8%) was most frequently found, followed by HPV 18 (10.7%) and HPV 45 (8.2%). In 6 patients (3.8%), HPV types could not been further classified, and these cases were therefore categorized as HPV X. Although a trend was noted toward poorer prognosis for women with carcinomas harboring HPV types 16, 18, and 45 than for patients with carcinomas harboring HPV types 31, 33, 35, 52, 56, 58, and 68, the differences were not statistically significant. The prevalence of adenocarcinoma and adenosquamous carcinoma was higher among HPV 18 positive patients than among patients with the other known HPV types (P=0.0002). CONCLUSIONS: The rate of HPV positivity in these 159 cervical carcinomas was 100%. These findings challenge the assumption that HPV negative cervical carcinomas exist. This high rate might be attributed to the use of a new broad-spectrum HPV PCR test. HPV typing in cervical carcinoma was not significantly related to clinical outcome. HPV 18 was significantly more frequently found in adenocarcinoma and adenosquamous carcinoma. The possibility of classifying HPV 45 as an oncogenic high risk type should be considered.

Adult↗
PubMed1999

Efficient anisotropic refinement of macromolecular structures using FFT.

This paper gives the equations for the use of fast Fourier transformations in individual atomic anisotropic refinement. Restraints on bonded atoms, on the sphericity of each atom and between non-crystallographic symmetry related atoms are described. These have been implemented in the program REFMAC and its performance with several examples is analysed. All the tests show that anisotropic refinement not only reduces the R value and Rfree but also improves the fit to geometric targets, indicating that this parameterization is valuable for improving models derived from experimental data. The computer time taken is comparable to that for isotropic refinements.

Catalase↗
PubMed1999

Effects of abused drugs on thresholds and breaking points of intracranial self-stimulation in rats.

The present study aimed to compare the effects of various abused drugs on threshold current intensities and the breaking points of intracranial self-stimulation. Effects of morphine (1-10 mg/kg, s.c.), d-amphetamine (0.3-3.2 mg/kg, i.p.), nicotine (0.1-3.2 mg/kg, s.c.), ethanol (0.6-2.4 g/kg, p.o.), caffeine (1-20 mg/kg, i.p.) and phencyclidine (0.3-5.6 mg/kg, i.p.) were studied in male Wistar rats trained to lever-press for electrical stimulation of ventral tegmental area. Morphine and d-amphetamine were the only two drugs that both decreased threshold currents and increased the maximal ratio of reinforced and non-reinforced responses. Nicotine (1 mg/kg) and ethanol (1.2 g/kg) lowered threshold currents while both decreases and increases in threshold current were seen after administration of low (5 mg/kg) and high (20 mg/kg) doses of caffeine, respectively. Nicotine, ethanol and caffeine had no effects in the progressive ratio procedure. Effects of phencyclidine did not reach levels of statistical significance in either procedure although high doses of phencyclidine disrupted performance in the progressive ratio procedure.

Animals↗
PubMed1991

Mapping of trypsin cleavage and antibody-binding sites and delineation of a dispensable domain in the beta subunit of Escherichia coli RNA polymerase.

We have mapped principal sites in the Escherichia coli RNA polymerase molecule that are exposed to attack by trypsin under limited proteolysis conditions. The 1342-amino acid-long beta subunit is alternatively cleaved at Arg903 or Lys909. The cleavage occurs adjacent to a dispensable domain (residues 940-1040) that is absent in the homologous RNA polymerase subunits from chloroplasts, eukaryotes, and archaebacteria. In E. coli, this region can be disrupted with genetic deletions and insertions without the loss of RNA polymerase function. Insertion of 127 amino acids into this region introduces a new highly labile site for trypsin proteolysis. The dispensable domain carries the epitope for monoclonal antibody PYN-6 (near residue 1000), which can be used for anchoring the catalytically active enzyme on a solid support. We also report the identification of a secondary trypsin cleavage at Arg81 of the beta' subunit within a putative zinc-binding domain that is conserved in prokaryotes and chloroplasts.

Amino Acid Sequence↗
PubMed1991

Mapping of the priming substrate contacts in the active center of Escherichia coli RNA polymerase.

The active center of DNA-dependent RNA polymerase performs the principal biochemical reaction of gene expression. Using cross-linkable substrate analogs and site-directed mutations, two evolutionarily invariant amino acids in the beta subunit of the Escherichia coli enzyme (Lys1065 and His1237) were mapped close to the binding site of the priming substrate of the reaction. Surprisingly, the mutational substitution of these residues (Lys1065----Arg and His1237----Ala) did not inactivate the catalytic function, but inhibited transition from the initiation to the elongation stage of transcription.

Affinity Labels↗