Biomedical subjects

A S Carroll

Publications and source records attributed to A S Carroll.

5 recordsLinked to original sources

PubMed2004

Effects of bird age, density, and molt on behavioral profiles of two commercial layer strains in cages.

Two commercial strains, Hy-Line W-36 and DeKalb XL, were moved to a laying house at 18 wk of age. They were housed 6 hens/layer cage at 2 densities (361 and 482 cm2/bird) with 2 replications each per strain/density combination. The high-density treatment contained 24 hens/replication and the low-density treatment contained 18 hens/replication for a total of 168 hens. Production parameters were measured during the first egg production cycle, the molt period, and the first 4 wk of the second lay cycle (20 to 68 wk of age). Behavioral observations were taken during 2 consecutive d at 26, 34, 43, 51, 62, 64, and 68 wk of age to examine behavioral patterns. Modified Hansen's tests were conducted concurrently to provide indication of the fearfulness levels of hens at the various stages of production. The production characteristics were similar for both strains. The hens kept at the higher density had lower (P < 0.01) hen-day production and (P < 0.05) daily egg mass. Appetitive behaviors were not affected by strain or density but were affected by the age of the hen and by molting. During the molt, feeding and drinking behavioral acts were fewer (P < 0.05) at 0.018 and 0.013 acts per bird/min, respectively, and standing behavior was highest. The results indicated that the frequencies of pecking inedible objects during the molt period were similar to the frequencies at 26 and 34 wk. Hens performed more acts of standing, and crouching and had lower frequency of movement during the molt. Those kept at a low density performed more movement acts. Feather pecking decreased as hens aged and increased when they molted but was not affected by strain or density. The frequency of aggression and submissive acts was significantly lower during the molt period. Behaviors were affected by strain, density, bird age, and molting; however, the patterns and number of aggressive acts did not increase to compromise the welfare status of the hens. Behaviors during the molt appeared consistent with mechanisms for conservation of body reserves.

Age Factors↗

PubMed2001

Chemical inhibition of the Pho85 cyclin-dependent kinase reveals a role in the environmental stress response.

In addition to its well-established role in responding to phosphate starvation, the cyclin-dependent kinase Pho85 has been implicated in a number of other physiological responses of the budding yeast Saccharomyces cerevisiae, including synthesis of glycogen. To comprehensively characterize the range of Pho85-dependent gene expression, we used a chemical genetic approach that enabled us to control Pho85 kinase activity with a cell-permeable inhibitor and whole genome transcript profiling. We found significant phenotypic differences between the rapid loss of activity caused by inhibition and the deletion of the genomic copy of PHO85. We demonstrate that Pho85 controls the expression of not only previously identified glycogen synthetic genes, but also a significant regulon of genes involved in the cellular response to environmental stress. In addition, we show that the effects of this inhibitor are both rapid and reversible, making it well suited to the study of the behavior of dynamic signaling pathways.

Alleles↗

PubMed2000

The effects of long-term caging and molt of Single Comb White Leghorn hens on heterophil to lymphocyte ratios, corticosterone and thyroid hormones.

Two commercial strains of 18-wk-old Single Comb White Leghorn (SCWL) hens, HyLine W-36 and DeKalb XL, were housed six hens per cage in layer cages at two densities (361 and 482 cm2 per bird) with two replications each per strain and density combination. The high density treatment contained 24 hens per replication, and the low density treatment contained 18 hens per replication. Egg production was measured during the first egg production cycle, a molt (fast) period, and the first 4 wk of the second lay cycle (20 to 68 wk of age). Blood samples were obtained from six hens from each replicate in each strain and density combination (total of 48) at 20, 26, 34, 43, 51, 62, 64, and 68 wk of age. In addition, blood samples were obtained in a random order from hens in each cage, and the sequence of sampling was recorded (1 to 6). Blood smears were made, from which heterophil to lymphocyte ratios (H:L) were determined. Radioimmunoassays were conducted to determine levels of plasma corticosterone (CS), 3,5,3'-triiodothyronine (T3), and thyroxine (T4). The results indicated that strain did not affect percentage hen-day egg production (%HDP). Strain and cage density did not affect H:L, T3, T4, or CS. However, these parameters were affected by bird age, which was related to the egg production cycle. Plasma CS significantly (P < or = 0.001) increased during peak %HDP at 26 wk and 64 wk during the molt (fast), and H:L significantly (P < or = 0.001) increased during the molt (fast) at 64 wk. The sequence in which blood samples were obtained, from hens within a cage in sampling order, also increased plasma CS. The CS was significantly (P < or = 0.001) elevated in the third, fifth, and sixth hens from which blood samples were drawn. Plasma T3 and T4 changed during the production cycle. The T3 was significantly (P < or = 0.0001) depressed during peak egg production at 26 wk and during the molt (fast) at 64 wk when compared with the other time periods. Plasma T4 was depressed (P < or = 0.0001) at 51 wk and was elevated (P < or = 0.0001) at 64 wk during the molt (fast). The physiological and metabolic parameters of the different hen strains and cage densities were similar during egg production. However, CS, T3, T4, and H:L changed with age in relation to the egg production cycle. In addition, the physiological demands of peak egg production and molt (fast) appeared to be similar.

Aging↗

PubMed1999

The SKN-1 amino-terminal arm is a DNA specificity segment.

The Caenorhabditis elegans SKN-1 protein binds DNA through a basic region like those of bZIP proteins and through a flexible amino-terminal arm segment similar to those with which numerous helix-turn-helix proteins bind to bases in the minor groove. A recent X-ray crystallographic structure suggests that the SKN-1 amino-terminal arm provides only nonspecific DNA binding. In this study, however, we demonstrate that this segment mediates recognition of an AT-rich element that is part of the preferred SKN-1 binding site and thereby significantly increases the sequence specificity with which SKN-1 binds DNA. Mutagenesis experiments show that multiple amino acid residues within the arm are involved in binding. These residues provide binding affinity through distinct but partially redundant interactions and enhance specificity by discriminating against alternate sites. The AT-rich element minor groove is important for binding of the arm, which appears to affect DNA conformation in this region. This conformational effect does not seem to involve DNA bending, however, because the arm does not appear to affect a modest DNA bend that is induced by SKN-1. The data illustrate an example of how a small, flexible protein segment can make an important contribution to DNA binding specificity through multiple interactions and mechanisms.

Adenine↗

PubMed1997

SKN-1 domain folding and basic region monomer stabilization upon DNA binding.

The SKN-1 transcription factor specifies early embryonic cell fates in Caenorhabditis elegans. SKN-1 binds DNA at high affinity as a monomer, by means of a basic region like those of basic-leucine zipper (bZIP) proteins, which bind DNA only as dimers. We have investigated how the SKN-1 DNA-binding domain (the Skn domain) promotes stable binding of a basic region monomer to DNA. A flexible arm at the Skn domain amino terminus binds in the minor groove, but a support segment adjacent to the carboxy-terminal basic region can independently stabilize basic region-DNA binding. Off DNA, the basic region and arm are unfolded and, surprisingly, the support segment forms a molten globule of four alpha-helices. On binding DNA, the Skn domain adopts a tertiary structure in which the basic region helix extends directly from a support segment alpha-helix, which is required for binding. The remainder of the support segment anchors this uninterrupted helix on DNA, but leaves the basic region exposed in the major groove. This is similar to how the bZIP basic region extends from the leucine zipper, indicating that positioning and cooperative stability provided by helix extension are conserved mechanisms that promote binding of basic regions to DNA.

Amino Acid Sequence↗