Biomedical subjects

Adam S Rothschild

Publications and source records attributed to Adam S Rothschild.

5 recordsLinked to original sources

PubMed2006

Inter-patient distance metrics using SNOMED CT defining relationships.

BACKGROUND: Patient-based similarity metrics are important case-based reasoning tools which may assist with research and patient care applications. Ontology and information content principles may be potentially helpful tools for similarity metric development. METHODS: Patient cases from 1989 through 2003 from the Columbia University Medical Center data repository were converted to SNOMED CT concepts. Five metrics were implemented: (1) percent disagreement with data as an unstructured "bag of findings," (2) average links between concepts, (3) links weighted by information content with descendants, (4) links weighted by information content with term prevalence, and (5) path distance using descendants weighted by information content with descendants. Three physicians served as gold standard for 30 cases. RESULTS: Expert inter-rater reliability was 0.91, with rank correlations between 0.61 and 0.81, representing upper-bound performance. Expert performance compared to metrics resulted in correlations of 0.27, 0.29, 0.30, 0.30, and 0.30, respectively. Using SNOMED axis Clinical Findings alone increased correlation to 0.37. CONCLUSION: Ontology principles and information content provide useful information for similarity metrics but currently fall short of expert performance.

Algorithms↗

PubMed2005

Leveraging systems thinking to design patient-centered clinical documentation systems.

A hospital is a type of system, yet healthcare information technology (IT) has largely failed to view it as such. The failure to view the hospital as a system has contributed to the practice of inefficient and ineffective clinical documentation. This paper seeks to address how current clinical documentation practices reflect and reinforce inefficiency and poor patient care. It also addresses how rethinking clinical documentation and IT together may improve the entire healthcare process by promoting a more integrated and patient-centered healthcare information paradigm. Rethinking IT in support of clinical documentation from a system-oriented perspective may help improve patient care and provider communication.

Efficiency, Organizational↗

PubMed2005

Information retrieval performance of probabilistically generated, problem-specific computerized provider order entry pick-lists: a pilot study.

OBJECTIVE: The aim of this study was to preliminarily determine the feasibility of probabilistically generating problem-specific computerized provider order entry (CPOE) pick-lists from a database of explicitly linked orders and problems from actual clinical cases. DESIGN: In a pilot retrospective validation, physicians reviewed internal medicine cases consisting of the admission history and physical examination and orders placed using CPOE during the first 24 hours after admission. They created coded problem lists and linked orders from individual cases to the problem for which they were most indicated. Problem-specific order pick-lists were generated by including a given order in a pick-list if the probability of linkage of order and problem (PLOP) equaled or exceeded a specified threshold. PLOP for a given linked order-problem pair was computed as its prevalence among the other cases in the experiment with the given problem. The orders that the reviewer linked to a given problem instance served as the reference standard to evaluate its system-generated pick-list. MEASUREMENTS: Recall, precision, and length of the pick-lists. RESULTS: Average recall reached a maximum of .67 with a precision of .17 and pick-list length of 31.22 at a PLOP threshold of 0. Average precision reached a maximum of .73 with a recall of .09 and pick-list length of .42 at a PLOP threshold of .9. Recall varied inversely with precision in classic information retrieval behavior. CONCLUSION: We preliminarily conclude that it is feasible to generate problem-specific CPOE pick-lists probabilistically from a database of explicitly linked orders and problems. Further research is necessary to determine the usefulness of this approach in real-world settings.

Humans↗

PubMed2005

Agreement, the f-measure, and reliability in information retrieval.

Information retrieval studies that involve searching the Internet or marking phrases usually lack a well-defined number of negative cases. This prevents the use of traditional interrater reliability metrics like the kappa statistic to assess the quality of expert-generated gold standards. Such studies often quantify system performance as precision, recall, and F-measure, or as agreement. It can be shown that the average F-measure among pairs of experts is numerically identical to the average positive specific agreement among experts and that kappa approaches these measures as the number of negative cases grows large. Positive specific agreement-or the equivalent F-measure-may be an appropriate way to quantify interrater reliability and therefore to assess the reliability of a gold standard in these studies.

Humans↗

PubMed2005

Inter-rater agreement in physician-coded problem lists.

Coded problem lists will be increasingly used for many purposes in healthcare. The usefulness of coded problem lists may be limited by 1) how consistently clinicians enumerate patients' problems and 2) how consistently clinicians choose a given concept from a controlled terminology to represent a given problem. In this study, 10 physicians reviewed the same 5 clinical cases and created a coded problem list for each case using UMLS as a controlled terminology. We assessed inter-rater agreement for coded problem lists by computing the average pair-wise positive specific agreement for each case for all 10 reviewers. We also standardized problems to common terms across reviewers' lists for a given case, adjusting sequentially for synonymy, granularity, and general concept representation. Our results suggest that inter-rater agreement in unstandardized problem lists is moderate at best; standardization improves agreement, but much variability may be attributable to differences in clinicians' style and the inherent fuzziness of medical diagnosis.

Forms and Records Control↗