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Anastasia Vaia

Publications and source records attributed to Anastasia Vaia.

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Polynomial-time algorithms for the integer minimal principle for centrosymmetric structures.

The minimal principle for structure determination from single-crystal X-ray diffraction measurements has recently been formulated as an integer linear optimization model for the case of centrosymmetric structures. Solution of this model via established combinatorial branch-and-bound algorithms provides the true global minimum of the minimal principle while operating exclusively in reciprocal space. However, integer programming techniques may require an exponential number of iterations to exhaust the search space. In this paper, a new approach is developed to solve the integer minimal principle to global optimality without requiring the solution of an optimization problem. Instead, properties of the solution of the optimization problem, as observed in a large number of computational experiments, are exploited in order to reduce the optimization formulation to a system of linear equations in the number field of two elements (F(2)). Two specialized Gaussian elimination algorithms are then developed to solve this system of equations in polynomial time in the number of atoms. Computational results on a collection of 38 structures demonstrate that the proposed approach provides very fast and accurate solutions to the phase problem for centrosymmetric structures. This approach also provided much better crystallographic R values than SHELXS for all 38 structures tested.

Algorithms↗

An integer programming approach to the phase problem for centrosymmetric structures.

The problem addressed in this paper is the determination of three-dimensional structures of centrosymmetric crystals from X-ray diffraction measurements. The 'minimal principle' that a certain quantity is minimized only by the crystal structure is employed to solve the phase problem. The mathematical formulation of the minimal principle is a nonconvex nonlinear optimization problem. To date, local optimization techniques and advanced computer architectures have been used to solve this problem, which may have a very large number of local optima. In this paper, the minimal principle model is reformulated for the case of centrosymmetric structures into an integer programming problem in terms of the missing phases. This formulation is solvable by well established combinatorial optimization techniques that are guaranteed to provide the global optimum in a finite number of steps without explicit enumeration of all possible combinations of phases. Computational experience with the proposed method on a number of structures of moderate complexity is provided and demonstrates that the approach yields a fast and reliable method that resolves the crystallographic phase problem for the case of centrosymmetric structures.

Journal Article↗