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Bianxiao Cui

Publications and source records attributed to Bianxiao Cui.

7 recordsLinked to original sources

Gene targeting of GAN in mouse causes a toxic accumulation of microtubule-associated protein 8 and impaired retrograde axonal transport.

Mutations in gigaxonin were identified in giant axonal neuropathy (GAN), an autosomal recessive disorder. To understand how disruption of gigaxonin's function leads to neurodegeneration, we ablated the gene expression in mice using traditional gene targeting approach. Progressive neurological phenotypes and pathological lesions that developed in the GAN null mice recapitulate characteristic human GAN features. The disruption of gigaxonin results in an impaired ubiquitin-proteasome system leading to a substantial accumulation of a novel microtubule-associated protein, MAP8, in the null mutants. Accumulated MAP8 alters the microtubule network, traps dynein motor protein in insoluble structures and leads to neuronal death in cultured wild-type neurons, which replicates the process occurring in GAN null mutants. Defective axonal transport is evidenced by the in vitro assays and is supported by vesicular accumulation in the GAN null neurons. We propose that the axonal transport impairment may be a deleterious consequence of accumulated, toxic MAP8 protein.

Animals↗

Anomalous behavior of the depletion potential in quasi-two-dimensional binary mixtures.

We report an experimental determination of the depletion interaction between a pair of large colloid particles present in a binary colloid mixture that has a high density of large particles and is tightly confined between two parallel plates, as a function of the small colloid particle density. The bare interaction between the large particles in the one component large colloid suspension, and the effective potential between the large particles in the binary colloid suspension represented as a pseudo-one-component fluid, were obtained by inverting the Ornstein-Zernike equation with the hypernetted chain closure. The depletion interaction is defined by subtracting the bare potential from the effective potential at fixed large colloid density. We find that the depletion potential in the quasi-two-dimensional (Q2D) system is purely attractive and short ranged as described by Asakura-Oosawa model. However, the depth of the depletion potential is found to be almost an order of magnitude larger than the counterpart depletion potential predicted for the same density and diameter ratio in a three-dimensional system. Although it is expected that the confining walls in the Q2D geometry enhance the excluded volume effects that generate entropic attraction, the observed enhancement is much larger than predicted for a Q2D binary mixture of hard spheres. We speculate that this anomalously strong confinement-induced depletion potential is a signature of characteristics of the real confined binary colloid mixture that are not included in any extant theory of the depletion interaction, specifically the omission of the role of the solvent in those theories. One such characteristic could be differential wall or particle wetting that generates a wall induced one-particle effective potential that confines the centers of the small particles to lie closer to the midplane between the walls than expected from the wall separation and the direct particle-wall interaction, thereby enhancing the depletion interaction.

Journal Article↗

From random walk to single-file diffusion.

We report an experimental study of diffusion in a quasi-one-dimensional (q1D) colloid suspension which behaves like a Tonks gas. The mean squared displacement as a function of time is described well with an ansatz encompassing a time regime that is both shorter and longer than the mean time between collisions. The ansatz asserts that the inverse mean squared displacement is the sum of the inverse mean squared displacement for short time normal diffusion (random walk) and the inverse mean squared displacement for asymptotic single-file diffusion (SFD). The dependence of the 1D mobility in the SFD on the concentration of the colloids agrees quantitatively with that derived for a hard rod model, which confirms for the first time the validity of the hard rod SFD theory. We also show that a recent SFD theory by Kollmann leads to the hard rod SFD theory for a Tonks gas.

Journal Article↗

Influence of a depletion interaction on dynamical heterogeneity in a dense quasi-two-dimensional colloid liquid.

We report the results of digital video microscopy studies of the large particle displacements in a quasi-two-dimensional binary mixture of large (L) and small (S) colloid particles with diameter ratio sigma(L)/sigma(S)=4.65, as a function of the large and small colloid particle densities. As in the case of the one-component quasi-two-dimensional colloid system, the binary mixtures exhibit structural and dynamical heterogeneity. The distribution of large particle displacements over the time scale examined provides evidence for (at least) two different mechanisms of motion, one associated with particles in locally ordered regions and the other associated with particles in locally disordered regions. When rhoL*=Npisigma(L) (2)/4A< or =0.35, the addition of small colloid particles leads to a monotonic decrease in the large particle diffusion coefficient with increasing small particle volume fraction. When rhoL* > or =0.35 the addition of small colloid particles to a dense system of large colloid particles at first leads to an increase in the large particle diffusion coefficient, which is then followed by the expected decrease of the large particle diffusion coefficient with increasing small colloid particle volume fraction. The mode coupling theory of the ideal glass transition in three-dimensional systems makes a qualitative prediction that agrees with the initial increase in the large particle diffusion coefficient with increasing small particle density. Nevertheless, because the structural and dynamical heterogeneities of the quasi-two-dimensional colloid liquid occur within the field of equilibrium states, and the fluctuations generate locally ordered domains rather than just disordered regions of higher and lower density, it is suggested that mode coupling theory does not account for all classes of relevant fluctuations in a quasi-two-dimensional liquid.

Journal Article↗

Anomalous hydrodynamic interaction in a quasi-two-dimensional suspension.

We study the correlated Brownian motion of micron-sized particles suspended in water and confined between two plates. The hydrodynamic interaction between the particles exhibits three anomalies. (i) The transverse coupling is negative; i.e., particles exert "antidrag" on one another when moving perpendicular to their connecting line. (ii) The interaction decays with interparticle distance r as 1/r(2), faster than in unconfined suspensions but slower than near a single wall. (iii) At large distances, the pair interaction is independent of concentration within the experimental accuracy. The confined suspension thus provides an unusual example of long-range, yet essentially pairwise, correlations even at high concentration. These effects are shown to arise from the two-dimensional dipolar form of the flow induced by single-particle motion.

Journal Article↗

Folding and misfolding of the papillomavirus E6 interacting peptide E6ap.

All-atom Langevin dynamics simulations have been performed to study the folding pathways of the 18-residue binding domain fragment E6ap of the human papillomavirus E6 interacting peptide. Six independent folding trajectories, with a total duration of nearly 2 micros, all lead to the same native state in which the E6ap adopts a fluctuating alpha-helix structure in the central portion (Ser-4-Leu-13) but with very flexible N and C termini. Simulations starting from different core configurations exhibit the E6ap folding dynamics as either a two- or three-state folder with an intermediate misfolded state. The essential leucine hydrophobic core (Leu-9, Leu-12, and Leu-13) is well conserved in the native-state structure but absent in the intermediate structure, suggesting that the leucine core is not only essential for the binding activity of E6ap but also important for the stability of the native structure. The free energy landscape reveals a significant barrier between the basins separating the native and misfolded states. We also discuss the various underlying forces that drive the peptide into its native state.

Biophysical Phenomena↗

Screened hydrodynamic interaction in a narrow channel.

We study experimentally and theoretically the hydrodynamic coupling between Brownian colloidal particles diffusing along a linear channel. The quasi-one-dimensional confinement, unlike other constrained geometries, leads to a sharply screened interaction. Consequently, particles move in concert only when their mutual distance is smaller than the channel width, and two-body interactions remain dominant up to high particle densities. The coupling in a cylindrical channel is predicted to reverse sign at a certain distance, yet this unusual effect is too small to be currently detectable.

Colloids↗