Bjarne Andresen | PubMed Health

PubMed2002

Genomic analysis of uncultured marine viral communities.

Viruses are the most common biological entities in the oceans by an order of magnitude. However, very little is known about their diversity. Here we report a genomic analysis of two uncultured marine viral communities. Over 65% of the sequences were not significantly similar to previously reported sequences, suggesting that much of the diversity is previously uncharacterized. The most common significant hits among the known sequences were to viruses. The viral hits included sequences from all of the major families of dsDNA tailed phages, as well as some algal viruses. Several independent mathematical models based on the observed number of contigs predicted that the most abundant viral genome comprised 2-3% of the total population in both communities, which was estimated to contain between 374 and 7,114 viral types. Overall, diversity of the viral communities was extremely high. The results also showed that it would be possible to sequence the entire genome of an uncultured marine viral community.

Bacteriophages↗

PubMed2002

Allometric scaling and maximum efficiency in physiological eigen time.

General optimization results from physics indicate that maximum efficiency of a process, in the sense of minimum overall entropy production, is achieved when the rate of entropy production is constant over time, however not in ordinary clock time but on an, in general varying, "eigen time" scale, intrinsic to the system. We identify the eigen time of a biological system with "physiological time," which generally scales with the 1/4 power of body mass, M(1/4), over a vast range of species. Since it is equally well established that metabolic rate scales as M(3/4), it follows that organisms produce entropy at the same intrinsic rate, fulfilling a necessary condition for maximum efficiency, and are all, furthermore, equally efficient on the physiological eigen time scale.

Animals↗