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Biomedical subjects

Brian L Scott

Publications and source records attributed to Brian L Scott.

At least 19 recordsLinked to original sources

Generation of spirotricyclic site-differentiated cyclotriphosphazenes: a solvent-free approach to multidentate N/O donor ligand systems.

Cyclotriphosphazene-based ligand systems are valuable materials to model the metal-binding event on the structurally and electronically related functionalized high molecular weight polyphosphazenes. We here report the facile synthesis of novel spirotricyclic cyclotriphosphazenes N(3)P(3)(MeNC(2)H(4)NMe)(2)L(2), N(3)P(3)(iPrNC(2)H(4)NiPr)(2)L(2), and N(3)P(3)(o-O(2)C(12)H(8))(2)L(2) that enables different substituents to be incorporated into the ligand system. This synthetic approach allows for control over the solubility and steric requirements of the exocyclic bidentate substituents, as well as the donor type and denticity of the coordination sites. A mononuclear lanthanum complex ([La(NO(3))(3)[N(3)P(3)(pzpy)(2)(MeNC(2)H(4)NMe)(2)]] (7)) and a series of dinuclear transition-metal complexes ([[ReCl(CO)(3)](2)[N(3)P(3)(pyNH)(2)(MeNC(2)H(4)NMe)(2)]] (4), [[FeI(2)](2)[N(3)P(3)(pyNH)(2)(MeNC(2)H(4)NMe)(2)]] (5), and [[PdCl(2)](2)[N(3)P(3)(pyNH)(2)(MeNC(2)H(4)NMe)(2)] (6)) have been prepared and structurally and spectroscopically characterized to explore the metal coordination environments supported by this class of ligands.

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Early transition-metal perfluoroalkyl complexes.

Elusive early transition-metal perfluoroalkyl complexes have been isolated and structurally characterized for the first time. Trifluoromethyltrimethylsilane, CF3SiMe3, serves as an excellent trifluoromethyl group-transfer reagent and reacts with the known Ti(IV) fluoride complex Cp2TiF2 to yield the novel Ti(IV) trifluoromethyl fluoride compound, Cp2Ti(CF3)(F) (1). Reaction of complex 1 with trimethylsilyltriflate (Me3SiOTf) affords the Ti(IV) trifluoromethyl triflate complex Cp2Ti(CF3)(OTf) (2). Both titanium perfluoroalkyl compounds have been characterized spectroscopically and by single-crystal X-ray analysis. The Ti-CF3 linkage in these complexes is remarkably robust and shows no evidence of an alpha-fluoride interaction (Ti...F-CF2) between the electrophilic Ti(IV) metal center and any of the C-F bonds in the trifluoromethyl group in the solid state or in solution.

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Tris(bis(trimethylsilyl)amido)samarium: X-ray structure and DFT study.

The compound Sm[N(SiMe(3))(2)](3) has been investigated experimentally by X-ray crystallography and computationally by DFT methods. The structure is analogous to that of other tris[bis(trimethylsilyl)amido]lanthanides, featuring positional disorder of the metal atom above and below the plane defined by the three N donor atoms, resulting in a trigonal pyramidal configuration. One of the methyl groups of each amido ligand is placed above the apex of the pyramid at close distance to the metal center suggesting the presence of agostic interactions. The DFT calculations have been carried out on the real molecule and on a Si[N(SiH(3))(SiH(2)Me)](3) model where the unique Me group was placed above the apex of the pyramid to probe the agostic interaction. In both cases, the optimized geometry reproduces very well the experimental structure and indicates the presence of beta-Si-C agostic interactions. A comparison of the optimized geometries obtained in the presence/absence of the Sm d and the Si d orbitals serves to illustrate the relevance of these orbitals for (i). the establishment of the pyramidal configuration at Sm, (ii). the Sm-N bond length, and (iii). the Sm-(beta-Si-C) bond length. The bonding analysis, which was carried out by both Mulliken and NBO methods, not only confirms the importance of the metal d orbitals for the Sm-N and Sm-(beta-Si-C) chemical bonding but also illustrates the relevance of electrostatic terms in the agostic interaction. Sm-N and N-Si pi bonding is present according to the bonding analysis but is not important for enforcing the planar configuration at N, nor the pyramidal configuration at Sm.

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Structural and spectroscopic trends in actinyl iodates of uranium, neptunium, and plutonium.

Two neptunyl(VI) iodates, NpO(2)(IO(3))(2)(H(2)O) (1) and NpO(2)(IO(3))(2).H(2)O (2), have been prepared from the aqueous reactions of Np(V) in HCl with KIO(4) or H(5)IO(6) at 180 degrees C and have been characterized by single crystal X-ray diffraction and Raman spectroscopy. Both compounds consist of two-dimensional arrangements of pentagonal bipyramidal [NpO(7)] polyhedra with axial neptunyl, NpO(2)(2+), dioxocations. In 1, the neptunium centers are bound in the equatorial plane by four bridging iodate anions and one terminal water molecule. The iodate anions link the [NpO(7)] units into corrugated sheets that interact with one another through intermolecular IO(3)(-)...IO(3)(-) interactions as also observed in UO(2)(IO(3))(2)(H(2)O). Compound 2 is isostructural with the recently reported PuO(2)(IO(3))(2).H(2)O, where oxygen atoms from bridging iodate anions occupy the five equatorial sites around the neptunyl moieties. The iodate anions occur as both mu(2)- and mu(3)-units and link the neptunyl polyhedra into sheets. Both types of iodate anions have their stereochemically active lone-pair of electrons aligned on one side of each layer creating a polar structure. Raman spectra of 1, UO(2)(IO(3))(2)(H(2)O), and PuO(2)(IO(3))(2).H(2)O show a sequential shift of the nu(1)(AnO(2)(2+)) stretch to lower wavenumber as the atomic number of the actinide is increased. Crystallographic data: 1, orthorhombic, space group Pcan, a = 7.684(2) A, b = 8.450(2) A, c = 12.493(3) A, Z = 4; 2, orthorhombic, space group Pna2(1), a = 7.314(1) A, b = 11.631(2) A, c = 9.449(2) A, Z = 4.

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Potential binding modes of beryllium with the class II major histocompatibility complex HLA-DP: a combined theoretical and structural database study.

In an effort to understand the molecular basis of chronic beryllium disease (CBD), a study of the chemical relationship between beryllium, antigen, and the major histocompatibility complex II, HLA-DP, was undertaken. A homology model of the HLA-DP protein was developed. An analysis of the sequences of HLA-DPB1 and HLA-DPA1 alleles most common among CBD patients revealed several carboxylate rich regions in the peptide-binding cleft. These regions contain many hard Lewis base sites that may provide bonding opportunities for beryllium, a hard Lewis acid. Quantum chemistry calculations and structural database results support the presence of beryllium clusters, bridged by carboxylate, hydroxo, and/or oxo ligands, in the HLA-DP binding cleft. These results strongly suggest that beryllium clusters are an integral part of the antigen, and may even act solely as antigen. This work provides an initial model for thinking about beryllium interactions with proteins relevant to CBD and other metal-induced diseases.

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Aqueous reactions of U(VI) at high chloride concentrations: syntheses and structures of new uranyl chloride polymers.

The reactions of UO(3) with acidic aqueous chloride solutions resulted in the formation of two new polymeric U(VI) compounds. Single crystals of Cs(2)[(UO(2))(3)Cl(2)(IO(3))(OH)O(2)].2H(2)O (1) were formed under hydrothermal conditions with HIO(3) and CsCl, and Li(H(2)O)(2)[(UO(2))(2)Cl(3)(O)(H(2)O)] (2) was obtained from acidic LiCl solutions under ambient temperature and pressure. Both compounds contain pentagonal bipyramidal coordination of the uranyl dication, UO(2)(2+). The structure of 1 consists of infinite [(UO(2))(3)Cl(2)(IO(3))(mu(3)-OH)(mu(3)-O)(2)](2-) ribbons that run down the b axis that are formed from edge-sharing pentagonal bipyramidal [UO(6)Cl] and [UO(5)Cl(2)] units. The Cs(+) cations separate the chains from one another and form long ionic contacts with terminal oxygen atoms from iodate ligands, uranyl oxygen atoms, water molecules, and chloride anions. In 2, edge-sharing [UO(3)Cl(4)] and [UO(5)Cl(2)] units build up tetranuclear [(UO(2))(4)(mu-Cl)(6)(mu(3)-O)(2)(H(2)O)(2)](2-) anions that are bridged by chloride to form one-dimensional chains. These chains are connected in a complex network of hydrogen bonds and interactions of uranyl oxygen atoms with Li(+) cations. Crystal data: 1, orthorhombic, space group Pnma, a = 8.2762(4) A, b = 12.4809(6) A, c = 17.1297(8) A, Z = 4; 2, triclinic, space group P1, a = 8.110(1) A, b = 8.621(1) A, c = 8.740(1) A, Z = 2.

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Salt-free synthesis of samarium-aluminum mixed-metal alkoxides: X-ray crystal structures of [[(i-Pr-O)(i-Bu)Al(mu-O-i-Pr)(2)Sm(O-i-Pr)(HO-i-Pr)](mu-O-i-Pr)](2), [(THF)(2)Sm(O-t-Bu)(2)(mu-O-t-Bu)(2)Al(i-Bu)(2)], Sm(OAr)(3)(THF)(3) (Ar = 2,4,6-Me(3)C(6)H(2)), [Nd(mu-OAr)(OAr)(2)(py)(2)](2) (Ar = 2,4,6-Me(3)C(6)H(2)), and (ArO)(3)Sm[(mu-O-t-Bu)(2)Al(2)(O-t-Bu)(4)] (Ar = 2,6-i-Pr(2)C(6)H(3)).

Reaction of equimolar quantities of Sm[N(SiMe(3))(2)](3) and Al(i-Bu)(3) with 6 equiv of iso-propyl alcohol in toluene leads to the formation of the mixed-metal alkoxide complex [[(i-Pr-O)(i-Bu)Al(mu-O-i-Pr)(2)Sm(O-i-Pr)(HO-i-Pr)](mu-O-i-Pr)](2) (1). An analogous reaction between 1:1 Sm[N(SiMe(3))(2)](3)/Al(i-Bu)(3) and 6 equiv of tert-butyl alcohol, followed by addition of THF, produces the THF adduct [(THF)(2)Sm(O-t-Bu)(2)(mu-O-t-Bu)(2)Al(i-Bu)(2)] (2). Compound 1 crystallizes in the space group P1 while 2 crystallizes in space group Cmcm. Cell parameters for 1: a = 11.028(2) A, b = 12.168(2) A, c = 12.879(2) A, alpha = 82.84(1) degrees, beta = 64.88(1) degrees, gamma = 70.80(1) degrees, Z = 1. Cell parameters for 2: a = 11.304(2) A, b = 22.429(4) A, c = 15.768(2) A, Z = 4. Attempts to prepare the bulkier derivatives result in the formation of lanthanide aryloxide species only; reaction between equimolar amounts of Ln[N(SiMe(3))(2)](3) (Ln = Sm, Nd) and Al(i-Bu)(3) with 6 equiv of HO-2,4,6-Me(3)C(6)H(2), followed by the addition of THF or pyridine, yields the Lewis base adducts Sm(OAr)(3)(THF)(3) (3) and [Nd(mu-OAr)(OAr)(2)(py)(2)](2) (4). Compound 3 crystallizes in the space group Pbca while 4 crystallizes in space group P2(1)/c. Cell parameters for 3: a = 16.5822(9) A, b = 15.5668(9) A, c = 29.902(2) A, Z = 8. Cell parameters for 4: a = 13.4496(8) A, b = 20.034(1) A, c = 16.206(1) A, beta = 113.782(1) degrees, Z = 2. Reaction of Al(2)(O-t-Bu)(6) with [Sm(OAr)(3)](2) (Ar = 2,6-i-Pr(2)C(6)H(3)) yields the adduct (ArO)(3)Sm[(mu-O-t-Bu)(2)Al(2)(O-t-Bu)(4)] (5), which crystallizes in the space group P2(1)/n. Cell parameters for 5: a = 14.0960(7) A, b = 27.3037(15) A, c = 16.7893(9) A, beta = 92.216(1) degrees, Z = 4.

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C-H Activation and C-C coupling of arenes by cationic Pt(II) complexes.

The synthesis and characterization of cationic platinum complexes of the type [(R(2)PC(2)H(4)PR(2))PtMe(OEt(2))]BAr(F) (R = Cy, Et) are reported. These electrophilic platinum cations are found to react quantitatively with arenes (benzene, toluene) at room temperature by undergoing intermolecular C-H activation with concomitant C-C coupling to generate complexes of the type [[Pt(R(2)PC(2)H(4)PR(2))](2)(mu-eta(3):eta(3)-biaryl)][BAr(F)](2). The dianionic biaryl ligands in these compounds exhibit a rare mu-eta(3):eta(3)-bis-allyl bonding mode and can be removed from the complex with stoichiometric oxidants to generate the free biaryl and [(R(2)PC(2)H(4)PR(2))Pt(mu-X)](2)[BAr(F)](2) (R = Cy, Et; X = Cl, I). The cationic platinum complexes [(R(2)PC(2)H(4)PR(2))PtMe(OEt(2))]BAr(F) (R = Cy, Et) are also quite reactive with water, forming the bridging hydroxide complexes [(R(2)PC(2)H(4)PR(2))Pt(mu-OH)](2)[BAr(F)](2) (R = Cy, Et). A possible mechanism is proposed for the C-C coupling reaction based upon the structures of these bridging biphenyl complexes, which provides a new perspective for the related palladium-catalyzed oxidative coupling of arenes to form biaryls.

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A mechanistic study of the samarium(II)-mediated reduction of aryl nitro compounds to the corresponding crylamines. The crystal structures of [Sm[N(SiMe(3))(2)](2)(thf)](2)(mu(2)-O) and [(Me(3)Si)(2)N](2)Sm(thf)(mu-PhNNPh)Sm[N(SiMe(3))(2)](2).

Treatment of nitrobenzene and other various nitroarenes with 6 equiv of samarium(II) under strictly anhydrous conditions allows for the isolation of aniline or the corresponding arylamine. Reducing the number of samarium(II) equivalents allows for the isolation of intermediate species, e.g., azoarenes or hydrazines. Use of Sm[N(SiMe(3))(2)](2), in place of the typically used SmI(2), has allowed for the detailed examination of the aqueous and nonaqueous species formed in this reduction and has been instrumental in delineation of the stepwise reaction mechanism. This is the first time that the reaction intermediates of an organic reaction mediated by samarium(II) have been isolated and analyzed by (1)H NMR and X-ray crystallography.

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Steric control of substituted phenoxide ligands on product structures of uranyl aryloxide complexes.

A series of uranyl aryloxide complexes has been prepared via metathesis reactions between [UO(2)Cl(2)(THF)(2)](2) and di-ortho-substituted phenoxides. Reaction of 4 equiv of KO-2,6-(t)()Bu(2)C(6)H(3) with [UO(2)Cl(2)(THF)(2)](2) in THF produces the dark red uranyl compound, UO(2)(O-2,6-(t)()Bu(2)C(6)H(3))(2)(THF)(2).THF, 1. Single-crystal X-ray diffraction analysis of 1 reveals a monomer in which the uranium is coordinated in a pseudooctahedral fashion by two apical oxo groups, two cis-aryloxides, and two THF ligands. A similar product is prepared by reaction of KO-2,6-Ph(2)C(6)H(3) with [UO(2)Cl(2)(THF)(2)](2) in THF. Single-crystal X-ray diffraction analysis of this compound reveals it to be the trans-monomer UO(2)(O-2,6-Ph(2)C(6)H(3))(2)(THF)(2), 2. Dimeric structures result from the reactions of [UO(2)Cl(2)(THF)(2)](2) with less sterically imposing aryloxide salts, KO-2,6-Cl(2)C(6)H(3) or KO-2,6-Me(2)C(6)H(3). Single-crystal X-ray diffraction analyses of [UO(2)(O-2,6-Cl(2)C(6)H(3))(2)(THF)(2)](2), 3, and [UO(2)Cl(O-2,6-Me(2)C(6)H(3))(THF)(2)](2), 4, reveal similar structures in which each U atom is coordinated by seven ligands in a pseudopentagonal bipyramidal fashion. Coordinated to each uranium are two apical oxo groups and five equatorial ligands (3, one terminal phenoxide, two bridging phenoxides, and two nonadjacent terminal THF ligands; 4, one terminal chloride, two bridging phenoxides, and two nonadjacent terminal THF ligands). Apparently, the phenoxide ligand steric features exert a greater influence on the solid-state structures than the electronic properties of the substituents. Emission spectroscopy has been utilized to investigate the molecularity and electronic structure of these compounds. For example, luminescence spectra taken at liquid nitrogen temperature allow for a determination of the dependence of the molecular aggregation of 3 on the molecular concentration. Electronic and vibrational spectroscopic measurements have been analyzed to examine trends in emission energies and stretching frequencies. However, comparison of the data for compounds 1-4 reveals that the innate electron-donating capacity of phenoxide ligands is only subtly manifest in either the electronic or vibrational energy distributions within these molecules.

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From clusters to ionic complexes: structurally characterized thallium titanium double alkoxides.

A series of sterically varied titanium alkoxides [[Ti(OR)(4)](n)(), n = 4, OR = OCH(2)CH(3) (OEt); n = 1, OCH(CH(3))(2) (OPr(i)); n = 2, OCH(2)C(CH(3))(3) (ONep); n = 1, OC(6)H(3)(CH(3))(2)-2,6 (DMP)] were reacted with a series of thallium alkoxides [[Tl(OR)](x) (x = 4, OR = OEt, ONep; n = infinity, DMP)]. The resultant products of the [Tl(mu(3)-OEt)](4)-modified [Ti(OR)(4)](n)() (OR = OEt, OPr(i), ONep) were found by X-ray analysis to be Tl(4)Ti(2)(mu-O)(mu(3)-OEt)(8)(OEt)(2) (1), Tl(4)Ti(2)(mu-O)(mu(3)-OPr(i))(5)(mu(3)-OEt)(3)(OEt)(2) (2), and TlTi(2)(mu(3)-OEt)(2)(mu-OEt)(mu-ONep)(2)(ONep)(4) (3), respectively. The reaction of [Tl(mu(3)-OEt)](4), 12HOEt, and 4[Ti(mu-ONep)ONep)(3)](2) to generate 3 in a higher yield resulted in the isolation of TlTi(2)(mu(3)-OEt)(mu(3)-ONep)(mu-OEt)(mu-ONep)(2)(ONep)(4) (4). Compounds 1 and 2 possess an octahedral (Oh) arrangement of two Ti and four Tl metal atoms around a mu-O central oxide atom (the Tl-O distance is too long to be considered a bond). For both compounds, each Ti atom adopts a distorted Oh geometry with one terminal OEt ligand. The Tl atoms are formally 4-coordinated, adopting a distorted pyramidal geometry using four mu(3)-OR (OR = OEt or OPr(i)) ligands to complete their coordination sphere. The Tl atoms reside approximately 1.4 A below the basal plane of oxygens. In contrast to these structures, both 3 and 4 utilize ONep ligands and display reduced oligomerization yielding trinuclear complexes without oxo formation. The two Ti cations are Oh, and the single Tl cation is in a formal distorted pyramidal (PYD) arrangement. If the lone pair of the Tl cations are considered in the geometry, each Tl adopts a square base pyramidal geometry. Two terminal ONep ligands are bound to each Ti with the remainder of the molecule consisting of mu(3)- and mu-ONep ligands. The reaction of [Tl(mu(3)-ONep)](4) with two equivalents of [Ti(mu-ONep)(ONep)(3)](2) also led to the isolation of the homoleptic trinuclear complex TlTi(2)(mu(3)-ONep)(2)(mu-ONep)(3)(ONep)(4) (5) which is analogous in structure to the mixed ligand species of 3 and 4. Each Ti is Oh coordinated with six ONep ligands, and the single Tl is PYD bound by ONep ligands. A further increase in the steric bulk of the pendant ligands, using [Tl(mu-DMP)](infinity) and [Ti(mu-ONep)(ONep)(3)](2), resulted in a further decrease in the nuclearity yielding the dinuclear species TlTi(mu-DMP)(mu-ONep)(DMP)(ONep)(2) (6). For 6, the two metals are bound by a mu-ONep and a mu-DMP ligand. The Tl metal center was solved in a bent geometry while the Ti adopted a distorted trigonal bipyramidal (TBP) geometry using three ONep and two DMP ligands to fill its coordination sphere. Further increasing the steric bulk of the ancillary ligands using Ti(DMP)(4) and [Tl(mu-DMP)](infinity) led to the formation of [Tl(+)][(-)(eta(2-3)-DMP)Ti(DMP)(4)] (7). The Ti metal center is in a TBP geometry, and the "naked" Tl cation resides unencumbered by solvent molecules but was found to have a strong pi-interaction with four DMP ligands of neighboring Ti(DMP)(5)(-) anions. For this novel set of compounds, (205)Tl NMR spectroscopy was used to investigate the solution behavior of these compounds. Multiple (205)Tl resonances were observed for the solution spectra of the crystalline material of 1-6, and a broad singlet was observed for 7. The large number of minor resonances noted for these compounds was attributed to sensitivity of the Tl cation based on small variations due to ligand rearrangement. However, the major resonance noted in the (205)Tl NMR solution spectra of 1-7 are in agreement with their respective solid-state structures.

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Chloroheptakis(dimethyl sulfoxide)uranium(IV) trichloride.

In the title complex, [UCl(C(2)H(6)OS)(7)]Cl(3), the uranium metal center is coordinated in a distorted bicapped trigonal prism geometry by seven O atoms from dimethyl sulfoxide ligands and by a terminal chloride ligand. Charge balance is maintained by three outer-sphere chloride ions per uranium(IV) metal center. Principle bond lengths include U-O 2.391 (2)-2.315 (2) A, U-Cl 2.7207 (9) A, and average S-O 1.540 (5) A.

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