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C Chachaty

Publications and source records attributed to C Chachaty.

26 records · Page 2Linked to original sources

Oligonucleotide conformations. (5) NMR and relaxation studies on GpU and UpG at neutral pH.

The average conformation of GpU and UpG in neutral aqueous solutions has been investigated by proton chemical shifts and coupling measurements as well as T1 relaxation time experiments. The proportion of the N and S pseudorotational conformers of the ribose ring has been derived from the vicinal coupling constants. The relaxation data provide information about the syn--anti equilibrium of the orientation of the base about the glycosidic bond. This orientation is predominantly syn for the Guo base in both dinucleoside phosphates, that of Urd is anti in the case of GpU and shows an almost equivalent syn and anti character for UpG.

Guanine Nucleotides↗

[A general method for the determination of the conformation of nucleotides bound to an enzyme site. Interaction between glycogen phsophorylase b and nucleoside-5'-monophosphates].

The conformation of 5' nucleotides in the active site of glycogen phosphorylase b has been deduced from T2 relaxation time of protons H1, H8 and H2. It is shown by deuterium substitution of the purine ring in position 8 that the orientation of the base is anti in the case of strong activators like adenosine 5'-monophosphate, and syn in that of weak activators like inosine 5'-monophosphate.

Adenosine Monophosphate↗

A proton-relaxation-time study of the conformation of some purine and pyrimidine 5'-nucleotides in aqueous solution.

The measurement of proton relaxation time T1 in a series of purine and pyrimidine 5'-nucleotides has been carried out to investigate their conformation in dilute neutral aqueous solutions. The interpretation of relaxation data has been performed with the help of computer calculations taking into account the different conformers of the ribose ring and of the exocyclic group. It has been found that all nucleotides under study show nearly the same preferential orientations of the base defined by gamma0 = 70 degrees +/- 10 degrees in the syn range. A more elaborate treatment, using an angular distribution derived from calculated potentials on 5" -GMP gives theoretical relaxation times in close agreement with experimental ones.

Binding Sites↗

Effects of platelet-activating factor (PAF), lyso-PAF and lysophosphatidylcholine on phosphatidylcholine bilayers, an ESR, 31P-NMR and X-ray diffraction study.

The effect of asymmetric phospholipids, such as platelet-activating factor (PAF), lyso-PAF and lysophosphatidylcholine, on phosphatidylcholine bilayers has been examined using ESR, 31P-NMR and X-ray diffraction methods. ESR and 31P-NMR experiments have been performed on oriented multibilayers. ESR measurements of 5-doxyl stearic acid, as a spin probe, show that PAF disorients phosphatidylcholine bilayers when present at molar ratios greater than 40%. This is manifest as a broadening of the local director orientation distribution, a parameter required to simulate the lineshape. Despite the marked change of the regular in-plane orientation of the films, there are only slight changes in the order parameter of the acyl chains. Cholesterol orients films containing asymmetric phospholipids, in a way consistent with the formation of 1/1 stoichiometric complexes between cholesterol and the asymmetric phospholipid. Such complexes can be detected with 3-doxyl cholestane, a spin-labelled sterol analogue interacting with lyso-PAF and PAF. Simulations of 31P-NMR resonance linewidth of oriented multibilayers of PAF/egg lecithin mixtures indicate a rippled structure which accounts for the perturbed distribution of the local director observed by ESR spin probe measurements. Micellisation of the film can be discounted on the basis of the 31P-NMR linewideth for the concentration range investigated. X-ray diffraction studies of liposomes of dimyristoyl- and dioleoyl-phosphatidylcholine containing PAF relate the disorientation of the film with the emergence of a lamellar interdigitated phase of reduced (4.2 nm) repeat distance. This interdigitated phase coexists with the lecithin lamellar phase (repeat spacing 6.0 nm) at temperatures below and above the gel-to-liquid crystal transition temperature of the lecithin. Cholesterol/PAF mixtures give X-ray diffraction patterns indexing a lamellar repeat distance of 6.7 nm. Cholesterol also prevents formation of interdigiatated lamellae with the various asymmetric phospholipids. A model is proposed where the asymmetric phospholipid segregates from lecithin to form 'blister-like' structures within the film consisting of thin interdigitated lamellae. Formation of complexes between cholesterol and the asymmetric lipid prevents the creation of these structures.

Cholesterol↗