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Biomedical subjects

Carlos Alberola-López

Publications and source records attributed to Carlos Alberola-López.

9 recordsLinked to original sources

Weaning from mechanical ventilation: a retrospective analysis leading to a multimodal perspective.

Practitioners' decision for mechanical aid discontinuation is a challenging task that involves a complete knowledge of a great number of clinical parameters, as well as its evolution in time. Recently, an increasing interest on respiratory pattern variability as an extubation readiness indicator has appeared. Reliable assessment of this variability involves a set of signal processing and pattern recognition techniques. This paper presents a suitability analysis of different methods used for breathing pattern complexity assessment. The contribution of this analysis is threefold: 1) to serve as a review of the state of the art on the so-called weaning problem from a signal processing point of view; 2) to provide insight into the applied processing techniques and how they fit into the problem; 3) to propose additional methods and further processing in order to improve breathing pattern regularity assessment and weaning readiness decision. Results on experimental data show that sample entropy outperforms other complexity assessment methods and that multidimensional classification does improve weaning prediction. However, the obtained performance may be objectionable for real clinical practice, a fact that paves the way for a multimodal signal processing framework, including additional high-quality signals and more reliable statistical methods.

Algorithms↗

On the estimation of the coefficient of variation for anisotropic diffusion speckle filtering.

In this paper, we focus on the problem of speckle removal by means of anisotropic diffusion and, specifically, on the importance of the correct estimation of the statistics involved. First, we derive an anisotropic diffusion filter that does not depend on a linear approximation of the speckle model assumed, which is the case of a previously reported filter, namely, SRAD. Then, we focus on the problem of estimation of the coefficient of variation of both signal and noise and of noise itself. Our experiments indicate that neighborhoods used for parameter estimation do not need to coincide with those used in the diffusion equations. Then, we show that, as long as the estimates are good enough, the filter proposed here and the SRAD perform fairly closely, a fact that emphasizes the importance of the correct estimation of the coefficients of variation.

Algorithms↗

Group-Slicer: a collaborative extension of 3D-Slicer.

In this paper, we describe a first step towards a collaborative extension of the well-known 3D-Slicer; this platform is nowadays used as a standalone tool for both surgical planning and medical intervention. We show how this tool can be easily modified to make it collaborative so that it may constitute an integrated environment for expertise exchange as well as a useful tool for academic purposes.

Electroencephalography↗

An approach for contour detection of human kidneys from ultrasound images using Markov random fields and active contours.

In this paper, a novel method for the boundary detection of human kidneys from three dimensional (3D) ultrasound (US) is proposed. The inherent difficulty of interpretation of such images, even by a trained expert, makes the problem unsuitable for classical methods. The method here proposed finds the kidney contours in each slice. It is a probabilistic Bayesian method. The prior defines a Markov field of deformations and imposes the restriction of contour smoothness. The likelihood function imposes a probabilistic behavior to the data, conditioned to the contour position. This second function, which is also Markov, uses an empirical model of distribution of the echographical data and a function of the gradient of the data. The model finally includes, as a volumetric extension of the prior, a term that forces smoothness along the depth coordinate. The experiments that have been carried out on echographies from real patients validate the model here proposed. A sensitivity analysis of the model parameters has also been carried out.

Bayes Theorem↗

On low order moments of the homodyned-K distribution.

Fractional low order moments have been reported as beneficial for sampling computations using the K distribution. However, it has been recently pointed out that this it not the case for the homodyned-K distribution for a tissue discrimination problem. In this paper we show that such an statement is not fully justified. To that end, we follow a standard pattern recognition procedure both to determine class separability measures and to classify data with several classifiers. We conclude that the optimum order of the moments is intimately linked to the specific statistical properties of the tissues to be discriminated. Some ideas on how to choose the optimum order are discussed.

Models, Theoretical↗

[Differential circadian rhythms in myocardial infarction according to its extent by electrocardiogram].

BACKGROUND AND OBJECTIVE: To determine the existence of circadian rhythm in the time of onset of acute myocardial infarction (AMI) according to their extension type (Q-wave vs. non-Q-wave). PATIENTS AND METHOD: We studied a retrospective cohort of patients from a multicentre study of myocardial infarction (ARIAM study group). We collected information about 54,249 infarctions from the data base of the ARIAM (Analysis of Delay in AMI) Spanish multicentre study. The following variables were analysed: general variables --age, gender, previous ischemic heart disease, outcome at coronary care unit, infarction electrocardiograph type (Q wave or non-Q wave) and location of AMI--, cardiovascular risk factors, and previous drug treatment of the patients. To verify the presence of circadian rhythm we developed a simple test of equality of time series based on the multiple-sinusoid cosinor analysis. Three sinusoids (24-12-8 h periods) were used. RESULTS: The time of pain onset shows circadian rhythm (p < 0.0000), which also is observed in both infarction electrocardiograph characteristics subgroups (Q-wave infarction and non-Q-wave infarction) (p < 0.0000). Q-wave infarction shows sinusoid curve with one maximum morning peak and non-Q-wave shows bimodal curve, with two peaks. Comparison between their curves shows statistical significance (p < 0.0000). CONCLUSIONS: AMI onset follows a circadian rhythm pattern, which is also observed in analysed subgroups. Differences in the circadian rhythm according to the Q/non-Q wave infarction characteristics, could be determined by different physiopathologic mechanism. The cosinor model fit with three components (24, 12 and 8-hour-periods) show good sensitivity to determine circadian rhythm.

Aged↗

A computational TW3 classifier for skeletal maturity assessment. A Computing with Words approach.

This paper proposes a fuzzy methodology to translate the natural language descriptions of the TW3 method for bone age assessment into an automatic classifier. The classifier is built upon a modified version of a fuzzy ID3 decision tree. No large data records are needed to train the classifier, i.e., to find out the classification rules, since the classifier is built upon rules given by the TW3 method. Only small data records are needed to fine-tune the fuzzy sets used to implement the rulebase.

Adolescent↗

Comments on: A methodology for evaluation of boundary detection algorithms on medical images.

In this paper we analyze a result previously published about a comparison between two statistical tests used for evaluation of boundary detection algorithms on medical images. We conclude that the statement made by Chalana and Kim (1997) about the performance of the percentage test has a weak theoretical foundation, and according to our results, is not correct. In addition, we propose a one-sided hypothesis test for which the acceptance region can be determined in advance, as opposed to the two-sided confidence intervals proposed in the original paper, which change according to the estimated quantity.

Abdomen↗

A theoretical framework to three-dimensional ultrasound reconstruction from irregularly sampled data.

Several techniques have been described in the literature in recent years for the reconstruction of a regular volume out of a series of ultrasound (US) slices with arbitrary orientations, typically scanned by means of US freehand systems. However, a systematic approach to such a problem is still missing. This paper focuses on proposing a theoretical framework for the 3-D US volume reconstruction problem. We introduce a statistical method for the construction and trimming of the sampling grid where the reconstruction will be carried out. The results using in vivo US data demonstrate that the computed reconstruction grid that encloses the region-of-interest (ROI) is smaller than those obtained from other reconstruction methods in those cases where the scanning trajectory deviates from a pure straight line. In addition, an adaptive Gaussian interpolation technique is studied and compared with well-known interpolation methods that have been applied to the reconstruction problem in the past. We find that the proposed method numerically outperforms former proposals in several control studies; subjective visual results also support this conclusion and highlight some potential deficiencies of methods previously proposed.

Algorithms↗