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Biomedical subjects

Christopher B Gorman

Publications and source records attributed to Christopher B Gorman.

13 recordsLinked to original sources
PubMed2005

Detection of DNA point mutation by atom transfer radical polymerization.

We report here a new DNA detection method in which polymer growth in atom transfer radical polymerization (ATRP) is used as a means to amplify detection signals. In this method, DNA hybridization and ligation reactions led to the attachment of ATRP initiators on a solid surface where specific DNA sequences were located. These initiators subsequently triggered the growth of poly(hydroxyethyl methacrylate) (PHEMA) at the end of immobilized DNA molecules and formed polymer brushes. The formation of PHEMA altered substrate opacity, rendering the corresponding spots readily distinguishable to the naked eye. A second ATRP reaction to form branched polymers on the surface drastically improved the visibility of DNA hybridization and significantly shortened the detection time. The resulting polymer film was characterized using infrared spectroscopy, ellipsometry, contact angle measurements, and atomic force microscopy. Direct visualization of 1 fmol of target DNA molecules of interest was demonstrated. A proof-of-principle experiment to detect DNA point mutation was conducted. The perfectly matched DNA targets were distinctively differentiated from those with mutations. The demonstrated capability to detect DNA mutation with direct visualization laid the groundwork for the future development of detector-free testing kits in single-nucleotide polymorphism screenings.

DNA↗
PubMed2004

Bifunctional, conjugated oligomers for orthogonal self-assembly: selectivity varies from planar substrates to nanoparticles.

A diphenylacetylene containing two different end groups (isonitrile and thioacetate) was synthesized, showing that the chemistry used to install each end group is compatible with that of the others. The isonitrile group binds preferentially to platinum, and the thiol group binds preferentially to gold. However, the selectivity was different when nanoparticles were compared to planar substrates.

Journal Article↗
PubMed2004

Fast directed motion of "fakir" droplets.

In this Letter, we report on the motion of water droplets on surfaces decorated with molecular gradients comprising semifluorinated (SF) organosilanes. SF molecular gradients deposited on flat silica substrates facilitate faster motion of water droplets relative to the specimens covered with an analogous hydrocarbon gradient. Further increase in the drop speed is achieved by advancing it along porous substrates coated with the SF wettability gradients. The results of our experiments are in quantitative agreement with a simple scaling theory that describes the faster liquid motion in terms of reduced friction at the liquid/substrate interface.

Journal Article↗
PubMed2004

Effect of structure on the reduction potentials of films of constitutional isomers of iron-sulfur cluster core dendrimers.

The thermodynamic redox potentials of films of constitutional isomers of iron-sulfur cluster core dendrimers were measured and compared. It was determined that the primary structure of the dendrimer influences its reduction potential. Dendrimers containing so-called backfolded linkages were more difficult to reduce than their extended analogues. This behavior is rationalized by suggesting that the backfolded isomers pack more tightly around the iron-sulfur cluster, creating a more hydrophobic local microenvironment. Also, all of these molecules are easier to reduce in the film than in dimethyl formamide solution. The variation in redox potential between film and solution environment was compared to that of dendrimers of differing generations and correlated with the amount of hydrophobic dendron surrounding the cluster.

Journal Article↗
PubMed2004

Infrared detection of a phenylboronic acid terminated alkane thiol monolayer on gold surfaces.

Polarization modulation infrared reflectance absorption spectroscopy (PM-IRRAS) and infrared reflectance absorption spectroscopy (IRRAS) have been used to characterize the formation of a self-assembled monolayer of N-(3-dihydroxyborylphenyl)-11-mercaptoundecanamide) (abbreviated PBA) on a gold surface and the subsequent binding of various sugars to the PBA adlayer through the phenylboronic acid moiety to form a phenylboronate ester. Vibrationally resonant sum frequency generation (VR-SFG) spectroscopy confirmed the ordering of the substituted phenyl groups of the PBA adlayer on the gold surface. Solution FTIR spectra and density functional theory were used to confirm the identity of the observed vibrational modes on the gold surface of PBA with and without bound sugar. The detection of the binding of glucose on the gold surface was confirmed in part by the presence of a C-O stretching mode of glucose and the observed O-H stretching mode of glucose that is shifted in position relative to the O-H stretching mode of boronic acid. An IR marker mode was also observed at 1734 cm(-1) upon the binding of glucose. Additionally, changes in the peak profile of the B-O stretching band were observed upon binding, confirming formation of a phenylboronate ester on the gold surface. The binding of mannose and lactose were also detected primarily through the IR marker mode at approximately 1736 to 1742 cm(-1) depending on the identity of the bound sugar.

Alkanes↗
PubMed2004

Effect of the counterion on the rate of electron transfer in dendrimer films.

The electrochemical behavior of a film composed of a redox-active dendrimer was studied as a function of the type of counterion available during its reduction and reoxidation. The rate of permeation/migration of counterions into the film appeared to be the bottleneck to electron transfer through the film. Because the dendrimer is rather hydrophobic, increasing the hydrophobicity of the counterion increased the rate and extent of electron hopping within the films.

Letter↗
PubMed2004

Attenuating negative differential resistance in an electroactive self-assembled monolayer-based junction.

The negative differential resistance (NDR) peak current observed in redox active self-assembled monolayer-based molecular junctions has been attenuated by controlling the composition of the molecular junction. Two approaches studied here include capping the electroactive ferrocenyl groups with beta-cyclodextrin and functionalizing the scanning tunneling microscope tip used to probe the self-assembled monolayer (SAM) with n-alkanethiols of different lengths. These are the first examples of systematic modification of the magnitude of the NDR response in a molecule-based system.

Journal Article↗
PubMed2003

Synthetic approaches to an isostructural series of redox-active, metal tris(bipyridine) core dendrimers.

Several types of six-armed, metal tris(bipyridine) core dendrimers were synthesized. Bis-4,4'-alkoxy bipyridine dendrons were prepared and employed to make tris(bipyridine) dendrimers. Although the ruthenium-centered and iron-centered dendrimers displayed quasi-reversible cyclic voltammetry, the analogous cobalt-centered complex did not. The synthesis of 4,4'-disubstituted bipyridines containing -CH(2)OR groups proceeded in low yield. The reactions of the dicarbanion of 4,4'-dimethyl bipyridine prepared with LDA and mesylate, triflate, and bromide groups were found to result in no or poor yields of carbon-carbon bond formation. Use of KDA in place of LDA resulted in much higher yields of dendritic bipyridines.

Journal Article↗
PubMed2003

Structural effects on encapsulation as probed in redox-active core dendrimer isomers.

Three pairs of isomeric, iron-sulfur core dendrimers were prepared. Each isomer pair was distinguished by a 3,5-aromatic substitution pattern (extended) versus 2,6-aromatic substitution pattern (backfolded). Several observations were made that supported the hypothesis that the iron-sulfur cluster cores were encapsulated more effectively in the backfolded isomers as compared to their extended isomeric counterparts. The backfolded isomers were more difficult to reduce electrochemically, consistent with encapsulation in a more hydrophobic microenvironment. Furthermore, heterogeneous electron-transfer rates for the backfolded molecules were attenuated compared to the extended molecules. From diffusion measurements obtained by pulsed field gradient spin-echo NMR and chronoamperometry, the backfolded dendrimers were found to be smaller than the extended dendrimers. Comparison of longitudinal proton relaxation (T(1)) values also indicated a smaller, more compact dendrimer conformation for the backfolded architectures. These findings indicated that the dendrimer size was not the major factor in determining electron-transfer rate attenuation. Instead, the effective electron-transfer distance, as determined by the relative core position and mobility in a dendrimer, is most relevant for encapsulation.

Journal Article↗
PubMed2002

The genesis of molecular electronics.

Molecular electronics is, relatively speaking, a young field. Even so, there have been many significant advances and a much greater understanding of the types of materials that will be useful in molecular electronics, and their properties. The purpose of this review is to provide a broad basis for understanding the areas where new advances might arise, and to provide introduction to the subdisciplines of molecular electronics. This review is divided into two major parts; an historical examination of the development of conventional electronics, which should provide some understanding of the push towards molecular electronics. The problems associated with continuing to shrink conventional systems are presented, along with references to some of the efforts to solve them. This section is followed by an in-depth look at the most important research into the types of behaviors that molecular systems have been found to display.

Journal Article↗
PubMed2002

Supramolecular assembly on surfaces: manipulating conductance in noncovalently modified mesoscale structures.

Molecules capable of complementary hydrogen bonding were used to control the noncovalent self-assembly and electronic properties of a chemically well-defined surface mesostructure. In this work, we patterned a footprint region for molecular assembly on a surface and used moieties featuring complementary recognition to tune the current-voltage properties of the patterned region. With the appropriate functionalities on the complementary moieties, we were able to increase and decrease the observed conductance in surface-bound mesoscale structures imaged by scanning tunneling microscopy (STM).

Journal Article↗