Biomedical subjects

Claude Robert

Publications and source records attributed to Claude Robert.

7 recordsLinked to original sources

PubMed2003

Quantification of histone acetyltransferase and histone deacetylase transcripts during early bovine embryo development.

Mammalian oocytes are very unique cells with an unlimited developmental potential. These totipotent cells are able to remove existing gene-expression patterns and to impose new ones. However, genome reprogramming is still a mystery. Posttranslational modifications by acetylation of the N-termini portion of histones composing the nucleosome are involved in genome reprogramming. These modifications alter the higher-order chromatin structure to render the DNA accessible to the regulatory and transcriptional machinery. In the present study, we have investigated, to our knowledge for the first time, precise expression patterns of seven genes involved in chromatin structure throughout bovine embryo development. Oocytes harvested from bovine ovaries were used for in vitro production of germinal vesicle oocytes, metaphase II oocytes, 2- and 8-cell embryos, and blastocysts. Total RNA was extracted from pools (triplicates) of 20 oocytes or from embryos of each developmental stage. By means of quantitative reverse transcription-polymerase chain reaction using SYBR Green to detect double-stranded DNA, mRNA expression profiles for histone deacetylases (HDAC1, HDAC2, HDAC3, and HDAC7), histone acetyltransferases (GCN5 and HAT1), and histone H2A were established. Transcripts for all genes were detected at all stages from the oocyte to the blastocyst. The HDAC1, HDAC2 (class I HDAC), and HAT1 (type B HAT) revealed similar expression profiles. The HDAC3 (class I HDAC) tends to have an expression profile similar to those of HDAC1, HDAC2, and HAT1, whereas the HDAC7 (class II HDAC) and GCN5 (type A HAT) profiles were different from those three. These results indicate variable levels of histone deacetylases and histone acetyltransferases throughout embryonic development and may indicate the ones that are involved in somatic remodeling.

Acetyltransferases↗

PubMed2002

Optical and physical properties of stratospheric aerosols from balloon measurements in the visible and near-infrared domains. 1. Analysis of aerosol extinction spectra from the AMON and SALOMON balloonborne spectrometers.

Aerosol extinction coefficients have been derived in the 375-700-nm spectral domain from measurement in the stratosphere since 1992, at night, at mid- and high latitudes from 15 to 40 km, by two balloonborne spectrometers, Absorption par les Minoritaires Ozone et NO(chi) (AMON) and Spectroscopie d'Absorption Lunaire pour l'Observation des Minoritaires Ozone et NO(chi) (SALOMON). Log-normal size distributions associated with the Mie-computed extinction spectra that best fit the measurements permit calculation of integrated properties of the distributions. Although measured extinction spectra that correspond to background aerosols can be reproduced by the Mie scattering model by use of monomodal log-normal size distributions, each flight reveals some large discrepancies between measurement and theory at several altitudes. The agreement between measured and Mie-calculated extinction spectra is significantly improved by use of bimodal log-normal distributions. Nevertheless, neither monomodal nor bimodal distributions permit correct reproduction of some of the measured extinction shapes, especially for the 26 February 1997 AMON flight, which exhibited spectral behavior attributed to particles from a polar stratospheric cloud event.

Journal Article↗

PubMed2002

Optical and physical properties of stratospheric aerosols from balloon measurements in the visible and near-infrared domains. II. Comparison of extinction, reflectance, polarization, and counting measurements.

The physical properties of stratospheric aerosols can be retrieved from optical measurements involving extinction, radiance, polarization, and counting. We present here the results of measurements from the balloonborne instruments AMON, SALOMON, and RADIBAL, and from the French Laboratoire de Météorologie Dynamique and the University of Wyoming balloonborne particle counters. A cross comparison of the measurements was made for observations of background aerosols conducted during the polar winters of February 1997 and January-February 2000 for various altitudes from 13 to 19 km. On the one band, the effective radius and the total amount of background aerosols derived from the various sets of data are similar and are in agreement with pre-Pinatubo values. On the other hand, strong discrepancies occur in the shapes of the bimodal size distributions obtained from analysis of the raw measurement of the various instruments. It seems then that the log-normal assumption cannot fully reproduce the size distribution of background aerosols. The effect ofthe presence of particular aerosols on the measurements is discussed, and a new strategy for observations is proposed.

Journal Article↗

PubMed2002

Electroencephalogram processing using neural networks.

The electroencephalogram (EEG), a highly complex signal, is one of the most common sources of information used to study brain function and neurological disorders. More than 100 current neural network applications dedicated to EEG processing are presented. Works are categorized according to their objective (sleep analysis, monitoring anesthesia depth, brain-computer interface, EEG artifact detection, EEG source-based localization, etc.). Each application involves a specific approach (long-term analysis or short-term EEG segment analysis, real-time or time delayed processing, single or multiple EEG-channel analysis, etc.), for which neural networks were generally successful. The promising performances observed are demonstrative of the efficiency and efficacy of systems developed. This review can aid researchers, clinicians and implementors to understand up-to-date interest in neural network tools for EEG processing. The extended bibliography provides a database to assist in possible new concepts and idea development.

Artifacts↗

PubMed2002

Quantification of cyclin B1 and p34(cdc2) in bovine cumulus-oocyte complexes and expression mapping of genes involved in the cell cycle by complementary DNA macroarrays.

Although high amounts of cyclin B1 mRNA are present in bovine oocytes arrested at the germinal vesicle (GV) stage, the protein is not detectable. Furthermore, there is a depletion of the stored cyclin B1 mRNA in the oocyte as follicular growth progresses. To assess the effect of follicular growth on the accumulation of M-phase promoting factor (MPF) components, mRNA and protein levels of cyclin B1 and p34(cdc2) were measured in GV oocytes collected from diverse follicle size groups (<2 mm, 3-5 mm, and >6 mm). Because oocytes collected from very small follicles have high levels of cyclin B1 mRNA, the onset of its accumulation in the oocytes was evaluated by in situ hybridization of fetal ovaries. Also, a comparative expression map of cell cycle-related genes expressed in the oocyte and cumulus cells was established using nylon-based cDNA arrays, which allowed the detection of 35 different genes transcribed mostly in oocytes. Both components of the pre-MPF complex were expressed at the mRNA level in GV oocytes, whereas p34(cdc2) was the only pre-MPF protein detected at that stage, thus indicating that meiosis resumption in bovine oocytes is differentially regulated as compared with other mammals, and meiosis resumption seems to be regulated by the translation of cyclin B1 mRNA.

Animals↗

PubMed2002

Quantification of housekeeping transcript levels during the development of bovine preimplantation embryos.

In mammals, the study of gene expression in the preimplantation embryo has been difficult because the standard procedures used to quantify mRNA generally require large amounts of starting material. The development of protocols using different quantitative strategies generally involving the polymerase chain reaction (PCR) has provided new tools for exploration of gene expression in preimplantation embryos. However, the use of an internal standard, often referred as a housekeeping gene, is essential to normalize the mRNA levels. RNA levels of eight housekeeping genes were quantified using real time PCR throughout the preimplantation period of the bovine embryo to find the most suitable gene to be used as standard. Histone H2a was the best internal standard because the transcript levels were constant across the preimplantation period. Linear amplification of antisense RNA using the T7 promotor for in vitro transcription of the entire RNA pool was evaluated as a suitable way to preamplify the starting material prior to quantification and was effective in providing accurate RNA abundance profiles throughout the preimplantation period. However, the amplification appears to be template dependent because the amplification factors were higher for some genes.

Actins↗

PubMedDate not supplied

Monitoring anesthesia using neural networks: a survey.

New methods of data processing combined with advances in computer technology have revolutionized monitoring of patients under anesthesia. The development of systems based on analysis of brain electrical activity (EEG or evoked potentials) by neural networks has provided impetus to many investigators. Though not claiming to be the end-all in patient monitoring, the potential and efficiency of the combination does indeed stand out. Various strategies are presented and discussed, as well as suggestions for further investigation.

Anesthesia↗