Development of an internal restriction control in the PCR detection of the methylenetetrahydrofolate reductase (MTHFR) C677T mutation.
BACKGROUND: Detection of the presence of 677C/T allele in the human MTHFR gene is easily achieved by amplification using primers designed to span this region. Hinf I digestion, occurring only in the 677T allele, subsequently discriminates between the two alleles. Existing methods, however, do not control for failed restriction endonuclease digestion. METHODS AND RESULTS: A new forward, modified primer was designed and placed further upstream to create a Hinf I site, which, because it is present in both alleles, would serve as an internal restriction control. CONCLUSIONS: By allowing an additional restriction to take place in both the normal and mutated alleles, the use of the new primer provided for an internal restriction control.