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D B Huang

Publications and source records attributed to D B Huang.

39 records · Page 3Linked to original sources

Hydrogen bonding in the crystal structure of the tetrasaccharide stachyose hydrate: a 1:1 complex of two conformers.

The crystal structure of stachyose hydrate, O-alpha-D-galactopyranosyl-(1----6)-O-alpha-D-galactopyrano- syl-(1----6)-alpha-D-glucopyranosyl beta-D-fructofuranoside tetrahydrate, has been refined using X-ray data at 119 K. The crystal structure is a 1:1 complex of conformers which differ in the fructofuranosyl and glucopyranosyl residues. Each conformer has an associated hydrogen-bond structure which includes different sites for the water molecules. When superimposed in the crystal, this gives rise to two sites of 0.5 occupancy for one carbon and one oxygen atom of the fructofuranose component, and for three oxygen atoms of the glucopyranose component. The corresponding three carbon atoms of the glucopyranose component have anomalous thermal motion parameters. The four water molecules are distributed over nine sites, six with occupancy 0.5, two with occupancy 0.4, and one with occupancy 0.2. Four of the water sites are associated with one conformer, and four with the other. The hydrogen bonding includes infinite chains which are linked to form irregular ribbons, extending in the direction of the alpha axis. All hydroxyl, ring, and linkage oxygen atoms are involved in the hydrogen bonding, which includes two-centered, three-centered, and four-centered hydrogen bonds.

Carbohydrate Conformation↗

The hydrogen bonding in the crystal structure of raffinose pentahydrate.

The crystal structure of raffinose pentahydrate, O-alpha-D-galactopyranosyl-(1----6)-O-alpha-D-glucopyranosyl-(1----2)- beta-D- fructofuranose pentahydrate, C18H32O16.5H2O, has been redetermined using low-temperature, 119 K, CuK alpha X-ray data. All hydrogen atoms were unambiguously located on difference syntheses. The final R-factor is 0.036 for 2423 observed structure amplitudes. The hydrogen bonding is composed of infinite chains, which are linked through the water molecules to form a three-dimensional network containing a chain of five linked water molecules. Three of the infinite chains extend in the directions of the crystallographic axis of the space group P2(1)2(1)2(1). Four of the water molecules accept two hydrogen bonds and one accepts one. All the hydroxyls and the ring and glycosidic oxygen atoms are involved in the hydrogen bonding. With one exception, the ring and glycosidic oxygens are hydrogen-bonded by means of the minor components of unsymmetrical three-center bonds.

Carbohydrate Conformation↗