Biomedical subjects

D B Spry

Publications and source records attributed to D B Spry.

4 recordsLinked to original sources

PubMed2007

Deprotonation dynamics and stokes shift of pyranine (HPTS).

The short and intermediate time scale dynamics of the photoacid pyranine (1-hydroxy-3,6,8-pyrenetrisulfonic acid, commonly referred to as HPTS) are studied with visible pump-probe spectroscopy in various solvents to elucidate the nature of its proton-transfer kinetics in water. The observed time dependences of HPTS are compared with those of the methoxy derivative, MPTS. A global fitting procedure is employed to model both the spectral shift (Stokes shift) caused by solvent reorganization and deprotonation of pyranine in water. Three distinct time-dependent features can be clearly identified. They are the Stokes shift (1 ps in H(2)O and 1.5 ps in D(2)O), followed by the deprotonation processes, which gives rise to a biexponential decay of the protonated species with time constants (in H(2)O) of 3 and 88 ps. By the use of a model previously discussed in the literature, the biexponential process can be interpreted as an initial deprotonation step followed by the longer time scale process which separates the resulting ion pair. The results presented here are consistent with some of the previous reports but unambiguously identify and quantitatively measure the Stokes shift as a separate and distinct phenomenon from the deprotonation process, in contrast to other reports that have suggested that all short time (a few picoseconds) dynamics are merely a Stokes shift.

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PubMed2006

Identification and properties of the 1La and 1Lb states of pyranine.

The spectroscopic locations of the 1La and 1Lb electronic states of pyranine (1-hydroxy-3,6,8-pyrenetrisulfonic acid, commonly referred to as HPTS), as well as several related compounds, are found using magnetic circular dichroism spectroscopy as well as absorption and fluorescence spectroscopies. These electronic states have been discussed in connection with the photoacid properties of HPTS. Polarization selective fluorescence spectroscopy is used to identify the transition dipole directions of the electronic states of the compounds studied. The issue of the origin for the changes in vibronic structure of HPTS in different solvents is addressed. It is demonstrated that a Brownian oscillator model, in which the strength of the coupling of the electronic states to the solvent changes with solvent, is sufficient to reproduce the trends in the shapes of the vibronic structure.

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PubMed2006

Testing the core/shell model of nanoconfined water in reverse micelles using linear and nonlinear IR spectroscopy.

A core/shell model has often been used to describe water confined to the interior of reverse micelles. The validity of this model for water encapsulated in AOT/isooctane reverse micelles ranging in diameter from 1.7 to 28 nm (w0 = 2-60) and bulk water is investigated using four experimental observables: the hydroxyl stretch absorption spectra, vibrational population relaxation times, orientational relaxation rates, and spectral diffusion dynamics. The time dependent observables are measured with ultrafast infrared spectrally resolved pump-probe and vibrational echo spectroscopies. Major progressive changes appear in all observables as the system moves from bulk water to the smallest water nanopool, w0 = 2. The dynamics are readily distinguishable for reverse micelle sizes smaller than 7 nm in diameter (w0 = 20) compared to the response of bulk water. The results also demonstrate that the size dependent absorption spectra and population relaxation times can be quantitatively predicted using a core-shell model in which the properties of the core (interior of the nanopool) are taken to be those of bulk water and the properties of the shell (water associated with the headgroups) are taken to be those of w0 = 2. A weighted sum of the core and shell components reproduces the size dependent spectra and the nonexponential population relaxation dynamics. However, the same model does not reproduce the spectral diffusion and the orientational relaxation experiments. It is proposed that, when hydrogen bond structural rearrangement is involved (orientational relaxation and spectral diffusion), dynamical coupling between the shell and the core cause the water nanopool to display more homogeneous dynamics. Therefore, the absorption spectra and vibrational lifetime decays can discern different hydrogen bonding environments whereas orientational and spectral diffusion correlation functions predict that the dynamics are size dependent but not as strongly spatially dependent within a reverse micelle.

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PubMed2005

Superfluidity in CH4-doped H2 nanoclusters.

We report a theoretical study of superfluidity in CH(4)-doped para-H(2) nanoclusters. Path integral simulations for clusters of 12-16 H(2) around a single CH(4) molecule were carried out at temperatures between 0.5 and 2 K to study the superfluid response of the cluster. The results indicate that a rapid increase in the superfluid response is expected to occur around 1 K. We analyzed the structures and statistics of these clusters and found that the larger permutation cycles which dominate the superfluid component tend to adopt ringlike structures on the surface of the CH(4) molecule.

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