Biomedical subjects
Publications and source records attributed to D T Zakrzhevskaia.
Proteinase activity has been shown to be associated with histones of rat thymus and liver nuclei. Hydrocortisone increases the activity of proteinases associated with thymus nuclear histones. Increasing activity of histone-associated proteinases is also observed during intensive transcription and replication in regenerating rat liver.
The nucleoid isolated from E. coli cells was subjected to further deletion by treatment with 2 M NaCl. After disintegration of this nucleoid by ultrasonication, two fractions were obtained, i. e., a rapidly (RS) and slowly sedimenting (SS) ones. The protein, RNA and DNA patterns in the RS fraction are similar to that of the eukaryotic cell nuclear matrix. Electrophoretic analysis of total non-dissociating by 2 M NaCl proteins revealed that the RS and SS fractions predominantly contain proteins with Mr 31,27 and 23 kD. The protein with Mr = 31 kD is firmly bound to DNA, does not dissociate in the guanidine hydrochloride (4 M)-urea (5 M) mixture as well as in solution of 1% sodium-dodecyl sulphate and may be responsible for the chromosome binding to the E. coli membrane.
A DNA-protein complex resistant to 8 M urea and 0.1% SDS was obtained by chromatography of nuclear matrix lysate from Ehrlich ascite carcinoma cells on Sepharose 2BCL. Separation of the complex under more severe conditions (4 M guanidine hydrochloride, 5 M urea) on hydroxylapatite resulted in protein and DNA fractions, as well as in two fractions of the DNA-protein complex. One of the fractions of this complex was enriched with single-stranded DNA and contained a 5-fold excess of newly synthesized DNA over the DNA present in the original complex. The fractions isolated from the nuclear matrix of control Ehrlich ascite carcinoma cells and the cells incubated with novobiocin revealed quantitative and qualitative differences in the electrophoretic patterns of the proteins. Treatment of cells with novobiocin resulted in inhibition of DNA replicative synthesis and an increase in the protein/DNA ratio in the nuclear matrix.
Single-strand breaks induced in DNA of ascitic hepatoma cells by gamma-rays and N-methyl-N-nitrosourea (MNU), resp., may be effectively repaired. Double-strand breaks of DNA from MNU-treated hepatoma cells are also effectively repairable in vivo. Only a small part of double-strand breaks induced by gamma-rays in DNA of these cells is repaired in the postradiation period. The combined action of gamma-rays and MNU on the hepatoma cells causes a complete inhibition of repair of DNA and its further degradation. Under these conditions, inhibition of the repair of DNA synthesis and repression of DNA polymerase I activity is observed.
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Studies have been made on formation and reparation of apurine-apyrimidine (AP) regions, monothread DNA ruptures, as well as on inhibition and recovery of DNA synthesis in gamma-irradiated 3- and 7-day embryos of the silkworm which sharply differ in their radiosensitivity. It was shown that in 3-day embryos, the number of AP regions and DNA ruptures immediately after irradiation is significantly higher than in 7-day embryos. DNA synthesis is more radiosensitive in 3-day embryos as compared to that in 7-day ones. Kinetics of postradiation recovery of regions and DNA ruptures in 3- and 7-day embryos is heterogeneous and significantly different. However, radiation inhibition and postradiation recovery of DNA synthesis in irradiated 3- and 7-day embryos are associated mainly with postradiation survival of these embryos.
Histone H2A, H2B, and H1--specific proteinases tightly associated with histones were shown to be present in rat thymus nuclei. The activity of proteinases tightly associated with histones increases after exposure of animals to gamma-rays. The denatured DNA activated the histone H1-specific proteinase. These proteinase dissociated from histones in the presence of dithiothreitol. The histones and proteinases were divided into fractions by chromatography on DEAE-cellulose in the presence of 5 mM dithiothreitol.
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Proteinase inhibitors (e.g. antipain, pepstatin A, and phenylmethane sulfonyl fluoride) were shown to decrease the rate of incision DNA degradation and the level of unscheduled synthesis of DNA in Ehrlich ascites tumor cells exposed to UV-light and gamma-radiation. The results obtained indicate that nuclear proteinases are involved in regulation of DNA repair process.
Protease inhibitors, antipain and pepstatin, decrease the postirradiation degradation of DNA in gamma-irradiated rat thymocytes. It is suggested that a protease-dependent process of induction of DNA breaks takes place in irradiated cells.
Structures and molecular kinetic models of function of 2-oxo acid dehydrogenase complexes were analyzed. It was suggested that identical protein subunits in the multienzyme complexes as in the structure capable of self-assembly have identical contacts with the neighbors and identical environment. By sharing the enzyme aggregate subunits into distinct conformational classes the peripheral components were demonstrated to be arranged on the core so that the entire complex would have a definite symmetry. The number of the conformational classes is specified by the architecture of the core and considerations of symmetry. The results have allowed us to consider the mechanisms of functioning of the complexes. Specific examples are discussed.