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Biomedical subjects

E A Carbonell

Publications and source records attributed to E A Carbonell.

8 recordsLinked to original sources
PubMed2006

Intervention thresholds for Aphis spiraecola (Hemiptera: Aphididae) on Citrus clementina.

The production of clementine fruit was affected by varying densities of Aphis spiraecola Patch (Hemiptera: Aphididae) maintained on four groups of clementine, Citrus clementina Hort. ex Tan., trees individually isolated in mesh cages. A formula relating the number of aphids per square meter of canopy per group of trees to yield loss in that group of trees was obtained, permitting us to calculate the economic injury levels (EILs) and economic thresholds (ETs) for treatment against A. spiraecola, i.e., EIL, ET, environmental economic injury level (EEIL), and environmental economic threshold (EET). In an example case with current values, EIL = 370, ET = 322, EEIL = 614, and EET = 533 aphids per m2 of canopy. Formulae designed for easier use in the field were obtained to express each of these thresholds. The formulae are compared with those obtained for Aphis gossypii Glover in a previous study; the intervention thresholds for A. spiraecola are slightly higher than those found for A. gossypii.

Animals↗
PubMed2005

Genetic analysis of citrus leafminer susceptibility.

Damage caused by the citrus leafminer (CLM), Phyllocnistis citrella, is highly dependent on the citrus flushing pattern. Chemical control is only required in young trees, both in nurseries and in newly established orchards. However, this situation is completely different in countries where the causal agent of citrus canker, the bacterium Xanthomonas axonopodis pv. citri exists. CLM infestation results in a higher incidence of citrus canker infection. Among preventive control strategies that provide environmentally sound and sustainable solutions, resistant or tolerant varieties remain the most economical means of insect control. The objective of the present study is to genetically analyse the resistance/susceptibility to CLM and two other traits that might be related, the deciduous behaviour and leaf area of the tree, in a progeny of citradias derived from the cross between two species with different CLM susceptibility--C. aurantium L. and Poncirus trifoliata--using linkage maps of each parent that include several resistance gene analogues. We detected two antibiosis and six antixenosis putative quantitative trait loci (QTLs) in a random sample of forty-two of those citradias. An important antibiosis QTL (R2=18.8-26.7%) affecting both percentage of infested leaves and number of pupal casts per leaf has been detected in P. trifoliata linkage group Pa7, which is in agreement with the CLM antibiotic character shown by this species, and independent from any segregating QTL involved in its deciduous behaviour. The maximum value for the Kruskal-Wallis statistic of the other putative antibiosis QTL coincides with marker S2-AS4_800 in sour orange linkage map. Given that the sequence of this marker is highly similar to several nucleotide binding site-leucine-rich repeat (NBS-LRR)-type resistance genes, it might be considered as a candidate gene for insect resistance in citrus.

Animals↗
PubMed2005

Comparative microsatellite linkage analysis and genetic structure of two populations of F6 lines derived from Lycopersicon pimpinellifolium and L. cheesmanii.

A population of recombinant inbred lines (RILs) has several advantages over its F2 population counterpart with respect to quantitative trait loci (QTLs) and genomic studies. The objective of the investigation reported here was the comparative characterization by simple sequence repeat (SSR) and sequence characterized amplified region (SCAR) markers of two populations of F6 lines derived from Lycopersicon pimpinellifolium (P population, consisting of 142 lines) and L. cheesmanii (C population, consisting of 115 lines) and sharing the female parent, L. esculentum var. cerasiforme. Almost the same percentage of polymorphic markers was found for each population although a different set of markers was involved. The proportion of SSR primer pairs (93 in total) that resulted in polymorphism for the main band was larger (55-56%) than for SCAR ones (13-16%). The C population showed the largest proportion of markers with zygotic and gametic segregation distortion, which is in agreement with the larger genetic distance reported between L. esculentum and L. cheesmanii than with the former and L. pimpinellifolium. Zygotic distortion corresponded primarily to an excess of heterozygotes in both populations, suggesting that the increment of homozygosity was the main factor limiting viability/self-fertility of the lines. Despite both populations sharing the female parent, P alleles were slightly favored in the P population while E alleles were the most frequently fixed in the C population. A linkage map for each population was obtained, with the average distances between consecutive markers being 3.8 cM or 3.4 cM depending on the population. Discrepancy between the maps for the location of only four markers on chromosomes 3, 6 and 10 was observed. Two possible causes of this discrepancy were investigated and can not be discarded: (1) the presence of duplicated markers and (2) segregation distortion caused by the selective advantage of gametes carrying one of the two alleles. This marker characterization of both populations will continue and will enable the comparative QTLs and candidate gene analysis of complex traits towards a more efficient utilization of genetic resources and breeding strategies.

Chromosome Mapping↗
PubMed2003

QTL analysis of citrus tristeza virus-citradia interaction.

Citrus tristeza virus (CTV) has caused the death of millions of trees grafted on sour orange ( Citrus aurantium). However, this rootstock is very well adapted to the Mediterranean, semi-arid conditions. The aim of the present research is to genetically analyze the accumulation of CTV in a progeny derived from the cross between C. aurantium and Poncirus trifoliata, both resistant to CTV isolate T-346. Graft propagation of 104 hybrids was done on healthy sweet orange as a rootstock. Three months later, each rootstock was graft inoculated with two patches of infected tissue (isolate T-346). One, 2, and sometimes, 3 and 4 years after inoculation, hybrids and infected patches were tested for CTV by tissue-blot immuno-assay. Additionally, CTV multiplication was evaluated every year as the optical density of double-antibody sandwich enzyme-linked immuno-sorbent assay reactions. Linkage maps for P. trifoliata based on 63 markers, and for C. aurantium based on 157 markers, were used. Most molecular markers were microsatellites and IRAP (inter-retrotransposon amplified polymorphisms). Some analogues of resistance and expressed sequences were also included for candidate gene analysis. Resistance against CTV was analyzed as a quantitative trait (CTV accumulation) by QTL (quantitative trait loci) analysis to avoid the assumption of monogenic control. Three major resistance QTLs were detected where the P. trifoliata resistance gene, Ctv-R, had been previously located in other progenies. Up to five minor QTLs were detected ( Ctv-A(1) to Ctv-A(5)). A significant epistatic interaction involving Ctv-R(1) and Ctv-A(1) was also found. An analogue of a resistance gene is a candidate for Ctv-A(3), and two expressed sequences are candidates for Ctv-A(1) and Ctv-A(5). Single-strand conformational polymorphism analysis of CTV genes QTL P20 and P25 (coat protein) in susceptible hybrids, was carried out to test whether or not any QTL accumulation was a defeated resistance gene. Since the same haplotype of the virus was visualized independently on the CTV titer, differences in the amount of virions are not explained through the selection of CTV genotypes by the host, but through differences among citradias in CTV replication and/or movement.

Chromosome Mapping↗
PubMed2001

Economic thresholds for Aphis gossypii (Hemiptera: Aphididae) on Citrus clementina.

Different levels of Aphis gossypii Glover were maintained on clementine trees by means of isolation inside mesh cages. Clementine yield loss was correlated with the number of aphids per square meter of canopy, obtaining the corresponding formula. Starting from this formula, the economic injury level (EIL) was calculated as follows: [218,333C + 11,130.6 VP0K]/[57.08 VP0K - 100C] = EIL (aphids/m2), where C = total insecticide cost per hectare, V = fruit price per kilogram, P0 = yield per hectare of a minimum pest level orchard, and K = reduction of injury due to treatment. Starting from the EIL, the economic threshold, the environmental EIL, and the environmental economic threshold were obtained. Formulae relating the number of aphids per square meter with other simpler indices expressing these thresholds (percentage of infested shoots, infested shoots per 0.25 m2 ring, index of infestation, percentage of occupied rings, and number of weekly captured aphids in a yellow trap) also were calculated.

Animals↗
PubMed1993

[Experimental design and data handling in food microbiology].

A discussion on the problems associated with designing experiments in Food Microbiology research is presented. After defining what is meant by Design of an Experiment, a series of questions are raised that, once answered, will help in properly designing the experiment. It is emphasized the chain research-design-model-analysis-design and the danger in blindly using well-known designs and canned programs.

Data Collection↗
PubMed1983

Sex-linked and maternal effects in the Eberhart-Gardner general genetics model.

To deal with differences between reciprocal crosses found in many animal breeding experiments, an extension of the general model for genetic effects, given by Eberhart and Gardner (1966, Biometrics 22, 864-881), is presented. In this extension, reciprocal differences between crosses are defined in terms of several maternal and sex-linked parameters, the latter being expressed as functions of gene values and their frequencies. Models are given for several kinds of crosses. Experimental setups or designs of increasing complexity are presented for the estimation of some of the parameters in the models, particularly the sex-linked and maternal ones, as well as the interpopulation heterotic additive-by-additive epistasis. For prediction purposes, different analyses are suggested for the model with highly correlated variables. If the genetic architecture of a trait in different populations is to be compared, the analysis of variance will provide enough degrees of freedom to allow the investigation of the importance of each kind of genetic effect. An example which uses all possible two-way crosses and a partial set of three-way crosses applied to two quantitative traits in the flour beetle, Tribolium castaneum, is included merely as a guide for computations. Population means given by Eberhart and Gardner are extended to incorporate the inbreeding coefficient.

Animals↗