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Biomedical subjects

E Egelman

Publications and source records attributed to E Egelman.

5 recordsLinked to original sources

Supercoiled DNA wraps around the bacteriophage phi 29 head-tail connector.

Supercoiled pBR322 DNA wraps around the outside of the isolated Bacillus subtilis bacteriophage phi 29 head-tail connector, the crux of the DNA packaging machine of the viral precursor capsid or prohead. The contour length of the supercoiled DNA, determined by EM, decreased by approximately 180 base pairs for each connector bound. Mass and radial density determinations by scanning transmission EM showed that the increased mass of the connector-DNA complex relative to the connector alone was equivalent to approximately 170 base pairs of DNA and was located around the outside of the connector. Topoisomerase I treatment of the complexes followed by deproteinization suggested that supercoils were restrained by the connectors. Connectors bound linear and open-circular plasmid DNAs inefficiently but were not wrapped by these DNAs. The wrapping of supercoiled DNA around the isolated phi 29 connector is hypothesized to reflect the initiation phase of the normal process of DNA packaging. Packaging substrates would be supercoiled, wrapped by the connector, linearized, and translocated by rotation of the connector relative to the viral capsid with the aid of ATP hydrolysis.

Bacillus Phages

Spatial visualization of DNA in solution.

An image analysis method is presented which allows for the reconstruction of the three-dimensional path of filamentous objects from two of their projections. Starting with stereo pairs, this method is used to trace the trajectory of DNA molecules embedded in vitreous ice and leads to a faithful representation of their three-dimensional shape in solution. This computer-aided reconstruction is superior to the subjective three-dimensional impression generated by observation of stereo pairs of micrographs because it enables one to look at the reconstructed molecules from any chosen direction and distance and allows quantitative analysis such as determination of distances, curvature, persistence length, and writhe of DNA molecules in solution.

DNA, Bacterial

Changes in the organization of actin filaments in the stereocilia of noise-damaged lizard cochleae.

Alligator lizards exposed to 105 dB broadband noise for 24 h showed a 33 dB loss in hearing which was almost completely recovered 11 days after removal from the noise. Two lesions were found in the actin filament organization which could affect the rigidity of the stereocilia and thus could account for this hearing loss. These lesions preferentially affect the tallest stereocilia. The more common one is a depolymerization of the actin filaments at the base of the stereocilium where it makes contact with the cuticular plate. This results in a displacement and detachment of the stereocilium from its rootlet, thereby affecting the orientation of the tallest stereocilium. The other lesion involves a loss in crossbridges between adjacent actin filaments in the stereocilium. We demonstrate that such a loss will dramatically affect the rigidity of the stereocilia.

Actins

Actin in the inner ear: the remarkable structure of the stereocilium.

The actin filament bundle in the stereocilium of the cochlear hair cell has liquid transverse order, but paracrystalline axial order. A single bonding rule, which determines how a cross bridging protein links neighbouring filaments, accounts for this unusual structure. Such liquid order is possible for bundles of other filamentous proteins.

Actins