Biomedical subjects

E J J Groenen

Publications and source records attributed to E J J Groenen.

4 recordsLinked to original sources

PubMed2006

Spin-coated polyethylene films probed by single molecules.

We have studied ultrathin spin-coated high-density polyethylene films by means of single-molecule spectroscopy and microscopy at 1.8 K. The films have been doped with 2.3,8.9-dibenzanthanthrene (DBATT) molecules, which function as local reporters of their immediate environment. The orientation distributions of single DBATT probe molecules in 100-200 nm thin films of high-density polyethylene differ markedly from those in low-density films. We have found a preferential orientation of dopant molecules along two well-defined, mutually perpendicular directions. These directions are preserved over at least a 2 mm distance. The strong orientation preference of the probe molecules requires the presence of abundant lateral crystal faces and is therefore not consistent with a spherulitic morphology. Instead, a "shish-kebab" crystal structure is invoked to explain our results.

Journal Article↗

PubMed2005

High-frequency EPR and ENDOR spectroscopy on semiconductor nanocrystals.

EPR and ENDOR experiments at 95 GHz on ZnO nanoparticles reveal the presence of shallow donors related to interstitial Li and Na atoms. The experiments allowed, for the first time, to probe the effect of confinement on the shape of the electronic wave function. In addition, it is observed that the 67Zn nuclear spins become polarized upon saturation of the EPR transition. This Overhauser effect is induced by the zero-point vibrations of the phonon system in the nanoparticles.

Journal Article↗

PubMed2002

An ab initio quantum-chemical study of the blue-copper site of azurin.

The electronic structure of the blue-copper site of Pseudomonas aeruginosa azurin has been investigated by ab initio multireference determinantal configuration interaction (MRD-CI) calculations. A truncated site consisting of copper and its three equatorial ligands has been studied with emphasis on the g tensor and the nitrogen hyperfine tensors of the coordinating histidines. In the ground state the singly occupied molecular orbital (SOMO) involves a copper 3d orbital pi antibonded to the cysteine sulfur and sigma antibonded to the histidine nitrogens. A proper description of the electron-paramagnetic-resonance parameters has been achieved through the use of an effective core potential for copper up to and including the 3s electrons. Both the complete g tensor and the anisotropic hyperfine tensors at the nitrogens are essentially reproduced. Mulliken spin densities of 35 and 59% on copper and sulfur, respectively, and 2.1 and 1.7% on the respective coordinating nitrogens reflect the delocalized character of the SOMO and the inequivalence of the histidines.

Azurin↗

PubMed2001

Paramagnetic resonance of biological metal centers.

The review deals with recent advances in magnetic resonance spectroscopy (hf EPR and NMR) of paramagnetic metal centers in biological macromolecules. In the first half of our chapter, we present an overview of recent technical developments in the NMR of paramagnetic bio-macromolecules. These are illustrated by a variety of examples deriving mainly from the spectroscopy of metalloproteins and their complexes. The second half focuses on recent developments in high-frequency EPR spectroscopy and the application of the technique to copper, iron, and manganese proteins. Special attention is given to the work on single crystals of copper proteins.

Binding Sites↗