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Biomedical subjects

E Mosekilde

Publications and source records attributed to E Mosekilde.

At least 19 recordsLinked to original sources

Quantitative effects of medium hardness and nutrient availability on the swarming motility of Serratia liquefaciens.

We report the first controlled measurements of expansion rates for swarming colonies of Serratia liquefaciens under different growth conditions, combined with qualitative observations of the organization of the colony into regions of differentiated cell types. Significantly, the results reveal that swarming colonies of S. liquefaciens can have an increasing expansion rate with time. We compare and contrast the expansion rate results with predictions from a recent mathematical model which coupled key hydrodynamical and biological mechanisms. Furthermore, we investigate whether the swarming colonies grow according to a power law or exponentially (for large times), as suggested by recent theoretical results.

Biofilms↗

Scaling properties of bicritical dynamics in unidirectionally coupled period-doubling systems in the presence of noise.

We study scaling regularities associated with the effects of additive noise on the bicritical behavior of a system of two unidirectionally coupled quadratic maps. A renormalization group analysis of the effects of noise is developed. We outline the qualitative and quantitative differences between the response of the system to random perturbations added to the master subsystem or the slave subsystem. The universal constants determining the rescaling rules for the intensity of the noise sources in the master and slave subsystems are found to be gamma=6.619036... and nu=2.713708..., respectively. A number of computer graphical illustrations for the scaling regularities is presented. We discuss the smearing of the fine structure of the bicritical attractor and the Fourier spectra in the presence of noise, the self-similar structure of the Lyapunov charts on the parameter plane near the bicritical point, and the shift of the threshold of hyperchaos in dependence of the noise intensity.

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Loss of coherence in a system of globally coupled maps.

We study the formation of symmetric (i.e., equally sized) or nearly symmetric clusters in an ensemble of globally coupled, identical chaotic maps. It is shown that the loss of synchronization for the coherent state and the emergence of subgroups of oscillators with synchronized behavior are two distinct processes, and that the type of behavior that arises after the loss of total synchronization depends sensitively on the dynamics of the individual map. For our system of globally coupled logistic maps, symmetric two-cluster formation is found to proceed through a periodic state associated with the stabilization either of an asynchronous period-2 cycle or of an asynchronous period-4 cycle. With further reduction of the coupling strength, each of the principal clustering states undergoes additional bifurcations leading to cycles of higher periodicity or to quasiperiodic and chaotic dynamics. If desynchronization of the coherent chaotic state occurs before the formation of stable clusters becomes possible, high-dimensional chaotic motion is observed in the intermediate parameter interval.

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Cluster synchronization modes in an ensemble of coupled chaotic oscillators.

Considering systems of diffusively coupled identical chaotic oscillators, an effective method to determine the possible states of cluster synchronization and ensure their stability is presented. The method, which may find applications in communication engineering and other fields of science and technology, is illustrated through concrete examples of coupled biological cell models.

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Chaotic dynamics from interspike intervals.

Considering two different mathematical models describing chaotic spiking phenomena, namely, an integrate-and-fire and a threshold-crossing model, we discuss the problem of extracting dynamics from interspike intervals (ISIs) and show that the possibilities of computing the largest Lyapunov exponent (LE) from point processes differ between the two models. We also consider the problem of estimating the second LE and the possibility to diagnose hyperchaotic behavior by processing spike trains. Since the second exponent is quite sensitive to the structure of the ISI series, we investigate the problem of its computation.

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Transcritical riddling in a system of coupled maps.

The transition from fully synchronized behavior to two-cluster dynamics is investigated for a system of N globally coupled chaotic oscillators by means of a model of two coupled logistic maps. An uneven distribution of oscillators between the two clusters causes an asymmetry to arise in the coupling of the model system. While the transverse period-doubling bifurcation remains essentially unaffected by this asymmetry, the transverse pitchfork bifurcation is turned into a saddle-node bifurcation followed by a transcritical riddling bifurcation in which a periodic orbit embedded in the synchronized chaotic state loses its transverse stability. We show that the transcritical riddling transition is always hard. For this, we study the sequence of bifurcations that the asynchronous point cycles produced in the saddle-node bifurcation undergo, and show how the manifolds of these cycles control the magnitude of asynchronous bursts. In the case where the system involves two subpopulations of oscillators with a small mismatch of the parameters, the transcritical riddling will be replaced by two subsequent saddle-node bifurcations, or the saddle cycle involved in the transverse destabilization of the synchronized chaotic state may smoothly shift away from the synchronization manifold. In this way, the transcritical riddling bifurcation is substituted by a symmetry-breaking bifurcation, which is accompanied by the destruction of a thin invariant region around the symmetrical chaotic state.

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Modeling the insulin-glucose feedback system: the significance of pulsatile insulin secretion.

A mathematical model of the insulin-glucose feedback regulation in man is used to examine the effects of an oscillatory supply of insulin compared to a constant supply at the same average rate. We show that interactions between the oscillatory insulin supply and the receptor dynamics can be of minute significance only. It is possible, however, to interpret seemingly conflicting results of clinical studies in terms of their different experimental conditions with respect to the hepatic glucose release. If this release is operating near an upper limit, an oscillatory insulin supply will be more efficient in lowering the blood glucose level than a constant supply. If the insulin level is high enough for the hepatic release of glucose to nearly vanish, the opposite effect is observed. For insulin concentrations close to the point of inflection of the insulin-glucose dose-response curve an oscillatory and a constant insulin infusion produce similar effects.

Blood Glucose↗

The interaction of thin-film flow, bacterial swarming and cell differentiation in colonies of Serratia liquefaciens.

The rate of expansion of bacterial colonies of S. liquefaciens is investigated in terms of a mathematical model that combines biological as well as hydrodynamic processes. The relative importance of cell differentiation and production of an extracellular wetting agent to bacterial swarming is explored using a continuum representation. The model incorporates aspects of thin film flow with variable suspension viscosity, wetting, and cell differentiation. Experimental evidence suggests that the bacterial colony is highly sensitive to its environment and that a variety of mechanisms are exploited in order to proliferate on a variety of surfaces. It is found that a combination of effects are required to reproduce the variation of bacterial colony motility over a large range of nutrient availability and medium hardness.

Cell Division↗

Dynamical system approach to phyllotaxis

This paper presents a bifurcation study of a model widely used to discuss phyllotactic patterns, i.e., leaf arrangements. Although stable patterns can be easily obtained by numerical simulations, a stability or bifurcation analysis is hindered by the fact that the model is defined by an algorithm and not a dynamical system, mainly because new active elements are added at each step, and thus the dimension of the "natural" phase space is not conserved. Here a construction is presented by which a well defined dynamical system can be obtained, and a bifurcation analysis can be carried out. Stable and unstable patterns are found by an analytical relation, in which the roles of different growth mechanisms determining the shape is clarified. Then bifurcations are studied, especially anomalous scenarios due to discontinuities embedded in the original model. Finally, an explicit formula for evaluation of the Jacobian, and thus the eigenvalues, is given. It is likely that problems of the above type often arise in biology, and especially in morphogenesis, where growing systems are modeled.

Journal Article↗

Extracting dynamics from threshold-crossing interspike intervals: possibilities and limitations.

In this paper we estimate dynamical characteristics of chaotic attractors from sequences of threshold-crossing interspike intervals, and study how the choice of the threshold level (which sets the equation of a secant plane) influences the results of the numerical computations. Under quite general conditions we show that the largest Lyapunov exponent can be estimated from a series of return times to the secant plane, even in the case when some of the loops of the phase space trajectory fail to cross this plane.

Algorithms↗

Comment on "Flow-distributed oscillations: stationary chemical waves in a reacting flow"

In a recent paper by Kaern and Menzinger [Phys. Rev. E 60, R3471 (1999)] a successful verification of the stationary space-periodic structures predicted by Andresen et al. [Phys. Rev. E 60, 297 (1999)] was reported. Kaern and Menzinger suggest a mechanism for the formation of such structures that yields a linear relationship between the selected wavelength and the flow rate. We find this mechanism too simple and produce numerical simulations that support the original interpretation of these structures.

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Desynchronization of chaos in coupled logistic maps.

When identical chaotic oscillators interact, a state of complete or partial synchronization may be attained in which the motion is restricted to an invariant manifold of lower dimension than the full phase space. Riddling of the basin of attraction arises when particular orbits embedded in the synchronized chaotic state become transversely unstable while the state remains attracting on the average. Considering a system of two coupled logistic maps, we show that the transition to riddling will be soft or hard, depending on whether the first orbit to lose its transverse stability undergoes a supercritical or subcritical bifurcation. A subcritical bifurcation can lead directly to global riddling of the basin of attraction for the synchronized chaotic state. A supercritical bifurcation, on the other hand, is associated with the formation of a so-called mixed absorbing area that stretches along the synchronized chaotic state, and from which trajectories cannot escape. This gives rise to locally riddled basins of attraction. We present three different scenarios for the onset of riddling and for the subsequent transformations of the basins of attraction. Each scenario is described by following the type and location of the relevant asynchronous cycles, and determining their stable and unstable invariant manifolds. One scenario involves a contact bifurcation between the boundary of the basin of attraction and the absorbing area. Another scenario involves a long and interesting series of bifurcations starting with the stabilization of the asynchronous cycle produced in the riddling bifurcation and ending in a boundary crisis where the stability of an asynchronous chaotic state is destroyed. Finally, a phase diagram is presented to illustrate the parameter values at which the various transitions occur.

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Stationary space-periodic structures with equal diffusion coefficients.

The paper investigates a chemical reaction-diffusion model in an open flow system. It is shown that such a system may, with particular boundary conditions, exhibit stationary space-periodic structures even in the case of equal diffusion coefficients. This is confirmed through numerical simulations.

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Loss of lag synchronization in coupled chaotic systems.

Lag synchronization denotes a particular form of synchronization in which the amplitudes of two interacting, nonidentical chaotic oscillators are correlated but there is a characteristic time delay between them. We study transitions to and between different forms of synchronization for the attractors defined as "in-phase" and "out-of-phase" and investigate the processes by which lag synchronization is lost in two coupled Rössler systems. With a small frequency mismatch between the two systems, these processes are related to the occurrence of a peculiar form of basin structure as more and more periodic orbits embedded into the synchronized chaotic state become unstable in a transverse direction.

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Gene therapy of T helper cells in HIV infection: mathematical model of the criteria for clinical effect.

This paper presents a mathematical analysis of the criteria for gene therapy of T helper cells to have a clinical effect on HIV infection. The analysis indicates that for such a therapy to be successful, it must protect the transduced cells against HIV-induced death. The transduced cells will not survive as a population if the gene therapy only blocks the spread of virus from transduced cells that become infected. The analysis also suggests that the degree of protection against disease-related cell death provided by the gene therapy is more important than the fraction cells that is initially transduced. If only a small fraction of the cells can be transduced, transduction of T helper cells and transduction of haematopoietic progenitor cells will result in the same steady-state level of transduced T helper cells. For gene therapy to be efficient against HIV infection, our analysis suggests that a 100% protection against viral escape must be obtained. The study also suggests that a gene therapy against HIV infection should be designed to give the transduced cells a partial but not necessarily total protection against HIV-induced cell death, and to avoid the production of viral mutants insensitive to the gene therapy.

Cell Death↗

Quantification of remodeling parameter sensitivity--assessed by a computer simulation model.

During normal aging and menopause, cancellous bone is lost at all skeletal sites due to remodeling-related factors: negative formation balance; temporarily increased remodeling space; and osteoclastic perforations. The relative importance of the various factors in inducing bone mass loss and perforations is still controversial. We have previously used a computer simulation model to describe the effect of several bone remodeling parameters on vertebral cancellous bone loss. The model focused on two different scenarios for the menopause and three different treatment regimens. The aim of the present study was to extend the previous study by quantifying remodeling parameter sensitivity for changes in the bone mass with the use of the computer model we had previously formulated. The menopause scenario, with increased activation frequency and increased resorption depth, was chosen as the base case scenario, and the following parameters were investigated in the sensitivity analysis: activation frequency; formation balance; resorption depth; and critical trabecular thickness. Simulations were performed for a period of 20 years starting at the age of 48 years. The analysis showed that the number of perforations and the perforation-related mass loss both exhibited a large sensitivity toward variations in the final resorption depth. However, the formation balance was the factor that was responsible for the greater part of the bone mass loss. The computer model allowed us to quantify the sensitivity of different output variables with respect to changes in some of the model parameters. This can give information about the biological mechanisms responsible for bone mass loss around the surgically induced or natural menopause and also provide an indication of the type of treatment that would be most useful in preventing the deterioration of the cancellous network.

Adult↗