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Biomedical subjects

E V Nordheim

Publications and source records attributed to E V Nordheim.

At least 19 recordsLinked to original sources
PubMed2005

Statistical evaluation of factors and interactions affecting dairy herd improvement milk urea nitrogen in commercial midwest dairy herds.

In this study, 400,729 Dairy Herd Improvement (DHI) records collected on 77,178 cows in 692 Midwest herds over 29 mo (January 1999 to May 2001) were used to analyze milk urea nitrogen (MUN) as collected the day of the test in 6 breeds. Records of Holsteins, Jerseys, and Brown Swiss were subjected to stepwise backward elimination analysis with a model including parity (primiparous vs. multiparous cows), sample type (morning vs. evening), milking frequency (2x vs. 3x [Holstein only]), season (winter, spring, summer, and fall), yield of fat-corrected milk (FCM) classified into 1 of 3 FCM categories (FCMc) and all possible higher-order interactions. Results indicated that FCMc contributed to test-day MUN variation in multiparous, but not primiparous, Holsteins. Sample type and season were significant in both parity groups; milking frequency was not significant, but milking frequency x season and milking frequency x FCMc were significant in both parity groups. The nature of these interactions differed for each parity group. For Jersey and Brown Swiss data analyzed by sample type separately, parity was not significant but tended to interact with FCMc, whereas season, FCMc, and season x FCMc were generally significant. Mean test-day MUN was 12.7, 14.6, and 14.4 mg/dL, with 24, 45, and 42% of records above 14.5 mg/dL in Holsteins, Jerseys, and Brown Swiss in single-breed herds, respectively. In Holsteins, MUN peaked at 7 to 10 d in milk (DIM), declined until 28 to 35 DIM, and rose again thereafter. In primiparous Holsteins, MUN did not change with FCM <or=42 kg/d, but for higher FCM yield, MUN declined linearly by 0.05 mg/dL per kilogram of FCM. In multiparous Holsteins, MUN increased by 0.06 and 0.03 mg/dL per kilogram of FCM as FCM yield increased from 5 to 29 and from 30 to 59 kg/d, respectively, but decreased by 0.06 mg/dL as FCM yield increased from 60 to 85 kg/d. The use of adjustment coefficients may facilitate interpretation of test-day MUN on commercial herds. Research should focus on the biological significance of the pattern of change in MUN the first few weeks postpartum and the drop in MUN in unusually high-producing cows.

Analysis of Variance↗
PubMed2003

Models for predicting dry matter intake of Holsteins during the prefresh transition period.

The objectives of this study were to develop and validate a model for predicting dry matter intake (DMI) of Holsteins during the prefresh transition period. The original database (ODB) for model development was established by compiling parity, body condition score (BCS), and DMI data during the final 3 wk of gestation from 366 Holsteins fed 24 different diets that were used in eight experiments conducted at three universities. For model validation, a validation database (VDB) was established by compiling data from 333 prefresh transition Holsteins fed 25 different diets that were used in eight experiments conducted at five universities. Dry matter intake during the prefresh transition period was fitted to an exponential function: DMI(t) = a + pe(kt), where DMI(t) = DMI as a percentage of body weight (BW) at time t, a = asymptotic intercept at time--infinity, p = change in intake (kg) from the asymptotic intercept until parturition, k = rate constant influencing the shape of the curve, and t = day relative to parturition expressed as days pregnant--280. The model developed from the ODB predicted DMI of heifers in the VDB with satisfactory accuracy and precision. However, this was not true for cows, probably due to differences in BCS of cows and diets fed to cows from the two data sets. When a subset of cows was selected from each data set that had similar BCS (> 4.0) and were fed similar diets, accuracy and precision of the model predicting DMI was improved. Finally, both databases were combined to develop final models for predicting DMI of heifers and cows. Proposed models for predicting mean daily DMI of heifers and cows during the prefresh transition period were DMI(t) = 1.713-0.688e(0.344t) (R2 = 0.96) and DMI(t) = 1.979-0.756e(0.154t) (R2 = 0.97), respectively. Adjustment factors for animal and dietary factors were generated to demonstrate the plausibility of adaptive fitting of the prediction. The regression coefficients of prediction models (a, p, and k) were affected by BCS and dietary organic macronutrient concentrations.

Animal Nutritional Physiological Phenomena↗
PubMed2002

Animal and dietary factors affecting feed intake during the prefresh transition period in Holsteins.

Parity, body condition score (BCS), and dry matter intake (DMI) data of 699 Holsteins fed 49 different diets during the final 3 wk of gestation (prefresh transition period) were compiled from 16 experiments conducted at eight universities. The objectives of this study were to determine the effects of animal and dietary factors on DMI and to elucidate interactions between animal and dietary factors and among dietary factors on DMI during the prefresh transition period. Animal factors examined were parity and BCS, whereas dietary factors examined were rumen undegradable protein (RUP), rumen degradable protein (RDP), neutral detergent fiber (NDF), and ether extract (EE). DMI decreased 32% during the final 3 wk of gestation, and 89% of that decline occurred during the final week of gestation. Day of gestation, animal factors, and dietary factors accounted for 56.1, 19.7, and 24.2% of explained variation in DMI, respectively, and R2 of this linear multivariable model was 0.18. Cows had higher DMI than heifers. DMI decreased linearly as BCS, RUP, and NDF increased, decreased quadratically as EE increased, and increased quadratically as RDP increased. Moreover, the magnitude of DMI depression as animals approached parturition was affected by characteristics of animals and dietary nutrient composition. There were significant parity x EE, BCS x NDF, RUP x NDF, RDP x NDF, NDF x EE, and RUP x EE interactions on DMI. In conclusion, parity, BCS, and concentrations of organic macronutrients in diets affected DMI during the prefresh transition period, and the magnitude of DMI depression as animals approached parturition.

Animals↗
PubMed1999

Quantitative imaging and statistical analysis of fluorescence in situ hybridization (FISH) of Aureobasidium pullulans.

Image and multifactorial statistical analyses were used to evaluate the intensity of fluorescence signal from cells of three strains of A. pullulans and one strain of Rhodosporidium toruloides, as an outgroup, hybridized with either a universal or an A. pullulans 18S rRNA oligonucleotide probe in direct or indirect FISH reactions. In general, type of fixation (paraformaldehyde or methanol-acetic acid) had no apparent effect on cell integrity and minimal impact on fluorescence. Permeabilization by enzyme treatment for various times, though needed to admit high Mw detection reagents (avidin-FITC) in indirect FISH, tended to nonspecifically degrade cells and lower the signal. Digestion was unnecessary and undesirable for the directly labelled probes. Multilabelled (five fluorescein molecules) probes enhanced fluorescence about fourfold over unilabelled probes. Overall, direct FISH was preferable to indirect FISH and is recommended especially for studies of microbes on natural substrata.

Analysis of Variance↗
PubMed1999

A study of deleterious gene structure in plants using Markov chain Monte Carlo.

The characteristics of deleterious genes have been of great interest in both theory and practice in genetics. Because of the complex genetic mechanism of these deleterious genes, most current studies try to estimate the overall magnitude of mortality effects on a population, which is characterized classically by the number of lethal equivalents. This number is a combination of several parameters, each of which has a distinct biological effect on genetic mortality. In conservation and breeding programs, it is important to be able to distinguish among different combinations of these parameters that lead to the same number of lethal equivalents, such as a large number of mildly deleterious genes or a few lethal genes, The ability to distinguish such parameter combinations requires more than one generation of mating. We propose a model for survival data from a two-generation mating experiment on the plant species Brassica rapa, and we enable inference with Markov chain Monte Carlo. This computational strategy is effective because a vast amount of missing genotype information must be accounted for. In addition to the lethal equivalents, the two-generation data provide separate information on the average intensity of mortality and the average number of deleterious genes carried by an individual. In our Markov chain Monte Carlo algorithm, we use a vector proposal distribution to overcome inefficiency of a single-site Gibbs sampler. Information about environmental effects is obtained from an outcrossing experiment conducted in parallel with the two-generation mating experiments.

Algorithms↗
PubMed1996

Number of lethal equivalents in human populations: how good are the previous estimates?

Lee et al. (1996) recently developed a method for interval estimation of the number of lethal equivalents by using a hierarchical structure of likelihood functions. This hierarchical model consists of two multinomial trials: one of the sampling process of the parents from the population of interest, and the other for the survival of the offspring of the families obtained by mating the parents. The method, initially developed for selfing and full-sib mating, is extended here to include more general mating systems as well as mixtures of mating systems. We applied it to human data sets for which confidence intervals were previously not available. Our point estimates were close to previous ones, and the standard deviations were generally quite small. Thus, even if debate over the meaning of the concept of lethal equivalents has not been entirely resolved, our results showed that the previous estimates are at least statistically meaningful.

Alleles↗
PubMed1995

Modelling age-specific survival in nesting studies, using a general approach for doubly-censored and truncated data.

In typical nest survival studies, the observed sample of nests is usually biased by left-truncation (i.e., only active nests enter the study); additionally the failure data may be doubly censored, because the exact dates of nest initiation and failure are uncertain. We present a general bivariate contingency table approach for analyzing such data. We use weakly structured step spline hazard models, which avoid estimability problems encountered in a strictly nonparametric approach, yet still permit flexibility. Our method eliminates a potential source of bias noted by Heisey and Nordheim (1990, Biometrics 46, 855-862) in the nest survival method of Pollock and Cornelius (1988, Biometrics 44, 397-404). We compare our approach to related techniques developed for estimating the incubation distribution of AIDS.

Acquired Immunodeficiency Syndrome↗
PubMed1991

The estimation of parameters from bulked samples.

An estimation procedure has been developed for the estimation of parameters from bulked sample using the parametric bootstrap and density estimation in conjunction with the one-step maximum-likelihood estimator. It is shown that the proposed estimation procedure provides an asymptotically efficient estimator for parameters of interest when the density for the mean of the bulked samples has a certain form. The lognormal density (with sigma 2 assumed known) is an important distribution with the proper form. The finite sample performance for bulked samples based on underlying lognormal observations was examined by Monte Carlo study. The results indicate that the proposed procedure leads to a reduction in mean squared error compared to known procedures.

Biopharmaceutics↗
PubMed1990

Experimental model of hypochloremic metabolic alkalosis caused by diversion of abomasal outflow in sheep.

Hypochloremic metabolic alkalosis accompanied by hypokalemia and hyponatremia was induced experimentally in 7 adult sheep by diversion (loss) of gastric contents through an Ivan and Johnston cannula placed in the cranial part of the duodenum just distal to the pylorus. Cannula placement was easily accomplished, and cannulae were tolerated well by the sheep. Volume of effluent produced during the 60- to 120-hour period of diversion ranged from 7.7 to 14.9 L and tended to be greatest during the first 24 hours. All sheep became dehydrated, with mean PCV and plasma total protein concentration increases of 94.2 and 61.7%, respectively. Plasma chloride concentration decreased in linear fashion from a prediversion mean of 113 mEq/L (range, 111 to 117 mEq/L) to an end-point mean of 54 mEq/L (range, 45 to 65 mEq/L). Plasma sodium and potassium concentrations also decreased, though potassium concentration increased terminally. There were rapid increases in arterial blood pH and bicarbonate and base excess concentrations during the first 48 hours after diversion. However, during the final stages of diversion, sheep developed superimposed metabolic acidosis with increased plasma lactate concentration and high anion gap.

Abomasum↗
PubMed1989

Effects of ketamine, xylazine, and a combination of ketamine and xylazine in Pekin ducks.

Effects of ketamine, xylazine, and a combination of ketamine and xylazine were studied in 12 male Pekin ducks (7 to 12 weeks old; mean [+/- SD] body weight, 3.1 +/- 0.3 kg). After venous and arterial catheterization and fixation of a temperature probe in the cloaca, each awake duck was confined, but not restrained, in an open box in a dimly lit room. Blood pressure and lead-II ECG were recorded. Three arterial blood samples were collected every 15 minutes over a 45-minute period (control period) and were analyzed for pHa, PaCO2 and PaO2. After the control period, each duck was assigned at random to 1 of 3 drug groups: (1) ketamine (KET; 20 mg/kg of body weight, IV), (2) xylazine (XYL; 1 mg/kg, IV), and (3) KET + XYL (KET 20 mg/kg and XYL, 1 mg/kg; IV). Measurements were made at 1, 5, 10, 15, 30, 45, 60, and 90 minutes after drug administration. All ducks survived the drug study. Cloacal temperature was significantly (P less than or equal to 0.05) increased above control cloacal temperature at 90 minutes after the administration of ketamine, and from 10 through 90 minutes after administration of ketamine plus xylazine. In ducks of the KET group, pHa, PaCO2, and PaO2, remained unchanged after administration of the drug. In ducks of the XYL group, pHa and PaO2 decreased significantly (P less than or equal to 0.05) from control values for all time points up to and including 15 minutes after drug administration.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals↗
PubMed1988

Sources of variability in the measurement of fungal spore yields.

VARIABILITY IN THE PRODUCTION OF FUNGAL SPORES AND IN THE MEASUREMENT OF SPORE YIELDS WAS INVESTIGATED IN FOUR SPECIES OF FUNGI: Colletotrichum gloeosporioides, Colletotrichum coccodes, Colletotrichum phomoides, and Acremonium strictum. When the fungi were grown on solid medium in microplates and spore yields were measured by counting the subsamples with a hemacytometer, the variability among hemacytometer squares was always the largest source of variation, accounting for 51 to 91% of the total variation. Variability among replicate cultures and results of repeat experiments were generally also significant. The effect of square-to-square variability on the precision of spore yield measurement was minimized by counting a moderate number (ca. 30) of squares per culture. Culture-to-culture variability limited the practical precision of spore production measurements to a 95% confidence interval of approximately the mean +/- 25%. We provide guidelines for determining the number of replicate cultures required to attain this or other degrees of precision. Particle counter-derived spore counts and counts based on spore weights were much less variable than were hemacytometer counts, but they did not improve spore production estimates very much because of culture-to-culture variability. Results obtained by both of these methods differed from those obtained with a hemacytometer; particle counter measurements required a correction for spore pairs, while the relationship between spore weights and spore counts changed as the cultures aged.

Journal Article↗
PubMed1988

Experimental respiratory decompression sickness in sheep.

Respiratory decompression sickness (RDCS, "the chokes") is a potentially lethal consequence of ambient pressure reduction. Lack of a clearly suitable animal model has impeded understanding of this condition. RDCS, unaccompanied by central nervous system signs, occurred in 17 of 18 unanesthetized sheep exposed to compressed air at 230 kPa (2.27 ATA) for 22 h, returned to normal pressure for approximately 40 min, and taken to simulated altitude (0.75 ATA, 570 Torr). Respiratory signs, including tachypnea, sporadic apnea, and labored breathing, were accompanied by precordial Doppler ultrasound evidence of marked venous bubble loading. Pulmonary arterial pressures exceeded 30 Torr in five catheterized sheep that died or became moribund. Hypoxemia (arterial Po2 less than 40 Torr), neutropenia, and thrombocytopenia were observed. Peribronchovascular edema was the most prominent necropsy finding. Chest radiography indicated interstitial edema in most affected sheep. High body weight and catheterization predisposed the sheep to severe RDCS. It appears that this protocol reliably provides a useful animal model for studies of RDCS and obstructive pulmonary hypertension, that the precipitating event is massive pulmonary embolization by bubbles, and that venous bubbles, detected by Doppler ultrasound, can signal impending RDCS.

Altitude↗
PubMed1987

Microplate assay for colletotrichum spore production.

A simple microplate method was devised to assay spore production by Colletotrichum gloeosporioides by growing the fungus on 1 ml of solid media in the wells of tissue culture plates. Growth and sporulation on microplates were compared at days 4 and 8 with growth and sporulation in 100-ml liquid batch cultures that involved 11 common media. Spore production per unit volume of medium was the same for solid and liquid forms of the media. Qualitative assessment of mycelial growth measured on microplates agreed with that of growth measured in liquid cultures. The microplate assay indicated that V8 juice was the best medium and that an organic content of about 6 mg/ml was optimal for high sporulation and low mycelium production. The assay provides a convenient, rapid, and inexpensive means of screening media for the production of fungal conidia in large numbers, to be used, for example, in biological control programs.

Journal Article↗
PubMed1987

Density and distribution of canine conjunctival goblet cells.

Conjunctival goblet cells (GCs) were quantitated to establish baseline values for density and distribution of these cells in healthy canine eyes. From each of 18 sites, tissue was collected, sectioned at 2 micron, and stained with periodic acid Schiff stain. Within each sampling site, 500 epithelial cells (GCs, squamous, polygonal, and basal epithelial cells) were counted and the ratio of GCs to total epithelial cells was computed as an index of goblet cell density or goblet cell index (GCI). A heterogenous distribution of canine conjunctival goblets cells was demonstrated. Lower nasal fornix (LNf) and adjacent sites, lower middle fornix (LMf) and lower nasal tarsal (LNt), had the highest mean densities of goblet cells. In contrast, GCs were essentially absent from the upper and lower bulbar areas. Remaining sites had intermediate GCIs. Sex differences in GCIs were noted for LNf and LNt sites. Mean tear film breakup times (BUTs) were determined, and, for normal beagle dogs, were 19.38 (+/- 4.80 secs) OS and 19.96 (+/- 5.01 secs) OD. The similarities between canine and human conjunctival goblet cell distributions support the use of the dog for studying the conjunctival mucous system.

Animals↗
PubMed1983

Incorporating extra information in experimental design for bioassay.

In a bioassay, under certain experimental circumstances, information on concentration (dose rate) and time to response for some subjects can be combined in a single analysis. An underlying logistic random variable is assumed and the resulting mixed- (continuous-quantal) response model is analyzed by likelihood methods. The estimation procedure for the mean and the variance is described, and expressions for asymptotic variances are obtained. A comparison of results from the mixed model and from the standard quantal-response model shows that there is a substantial reduction in the variance of the estimators for the mixed model. On the basis of the table of asymptotic variances, some design implications are discussed. An example from insect pheromone research is used to illustrate the main ideas.

Analysis of Variance↗
PubMed1982

Lognormal distribution of epiphytic bacterial populations on leaf surfaces.

Total populations of epiphytic bacteria and selected components thereof were determined on sets of 24 to 36 individual leaves (corn, rye) or leaflets (snap bean, soybean, tomato) of field-grown plants by washing and dilution plating. In general, levels of component populations (e.g., bacteria that are ice nucleation active) were quantitatively more variable from leaf to leaf within a set than were total epiphytic bacterial populations. Populations of a given component frequently varied by a factor of 100 to 1,000 within a set of leaves. Total bacterial populations usually varied by a factor of about 10. For each set of leaves, total and component epiphytic bacterial populations were found to approximate a lognormal distribution by the Shapiro-Wilk test for normality. Due to the lognormal distribution of epiphytic bacterial populations, estimates of population size based on the common practice of using bulked samples (wherein several leaves are washed together) will overestimate the population median by a factor of approximately 1.15sigma. From the known probability distribution of bacterial populations, the frequency with which a given bacterial population size is met or exceeded on individual leaves can be estimated. If the bacterial component is phytopathogenic, the frequency estimates could be used to relate quantitatively pathogen populations and disease incidence.

Journal Article↗
PubMedDate not supplied

Effects of pubic symphysiodesis in dysplastic puppies.

OBJECTIVE: To determine the long-term effects of juvenile pubic symphysiodesis (JPS) in dysplastic puppies. STUDY DESIGN: Prospective, randomized, clinical trial. ANIMALS: Seven dysplastic Chesapeake Bay retrievers and 2 beagle-crosses (BX1 and 2). METHODS: Five puppies had JPS performed with electrocauterization at 12, 16, 20, 22, and 24 weeks of age, respectively. Two puppies served as controls. BX1 and BX2 were used to obtain biopsies of the symphysis. Hips were evaluated for: pelvic development (transverse computerized tomography for acetabular angle [AA] and dorsal acetabular rim angle [DARA]); laxity [hip extended and stress radiography [distraction index (DI)]); Ortolani maneuver with reduction angles; acetabular coverage (Norberg angles); and function (coxofemoral range of motion, hip pain, and gait analysis by force-plate technique at 44 and 137 weeks of age). RESULTS: The pubis fused prematurely in every puppy that was operated on with the JPS technique. Greater acetabular responses were related to younger ages at surgery. The final mean AA in dogs that had JPS was 25 degrees greater than preoperative values; 40% increased over control. The DARA final mean was 10 degrees, 52% less than preoperative values and 46% less than control. The final mean DI in dogs having JPS was 0.28, 47% improved over preoperative values and 58% better than control. Mean pelvic dimensions in dogs that had JPS were 18% less than control. Gait analyses were normal for all dogs at 137 weeks. No urinary or bowel complications occurred. CONCLUSIONS: Significant ventrolateral acetabular rotation, increased hip coverage, diminished hip laxity, normal pain-free gait, and insignificantly reduced pelvic size occurred after JPS. CLINICAL SIGNIFICANCE: Dysplastic hips in young dogs were significantly improved by JPS.

Age Factors↗