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Edward I. Solomon

Publications and source records attributed to Edward I. Solomon.

10 recordsLinked to original sources
PubMed2001

Oxygen Binding, Activation, and Reduction to Water by Copper Proteins.

Copper active sites play a major role in biological and abiological dioxygen activation. Oxygen intermediates have been studied in detail for the proteins and enzymes involved in reversible O(2) binding (hemocyanin), activation (tyrosinase), and four-electron reduction to water (multicopper oxidases). These oxygen intermediates exhibit unique spectroscopic features indicative of new geometric and electronic structures involved in oxygen activation. The spectroscopic and quantum-mechanical study of these intermediates has defined geometric- and electronic-structure/function correlations, and developed detailed reaction coordinates for the reversible binding of O(2), hydroxylation, and H-atom abstraction from different substrates, and the reductive cleavage of the O-O bond in the formation water.

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PubMed1999

Relationship between the Dipole Strength of Ligand Pre-Edge Transitions and Metal-Ligand Covalency.

The electric dipole contributions to the observed pre-edge intensities in ligand K-edge X-ray absorption (XAS) spectra are analyzed in terms of covalent-bonding contributions between the metal and ligand for a prototype system with one hole in the d shell. One- and two-center contributions to the intensity are identified. By direct evaluation of the integrals involved in the intensity expression, the two-center terms are shown to be at least 1 order of magnitude smaller than the one-center terms and can be ignored to a reasonable approximation. The one-center terms reflect the amount of ligand character in the partially occupied metal-based MOs and are proportional to the intrinsic transition moment of a ligand-centered 1s --> np transition. The final intensity does not contain terms proportional to the square of the metal-ligand distance as might have been expected on the basis of the analogy between ligand K-edge and ligand-to-metal charge transfer (LMCT) transitions that both formally lead to transfer of electron density from the ligand to the metal. This is due to the fact that the transition density is completely localized on the ligand in the case of a ligand K-edge transition but is delocalized over the metal and the ligand in the case of a LMCT transition. The effective nuclear charge dependence of the one-center transition moment integral was studied by Hartree-Fock level calculations and was found to be small. Electronic relaxation effects were considered and found to be small from a Hartree-Fock calculation on a cupric chloride model.

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PubMed1999

Spectroscopic Investigation of Reduced Protocatechuate 3,4-Dioxygenase: Charge-Induced Alterations in the Active Site Iron Coordination Environment.

Chemical reduction of the mononuclear ferric active site in the bacterial intradiol cleaving catecholic dioxygenase protocatechuate 3,4-dioxygenase (3,4-PCD, Brevibacterium fuscum) produces a high-spin ferrous center. We have applied circular dichroism (CD), magnetic circular dichroism (MCD), variable-temperature-variable-field (VTVH) MCD, X-ray absorption (XAS) pre-edge, and extended X-ray absorption fine structure (EXAFS) spectroscopies to investigate the geometric and electronic structure of the reduced iron center. Excited-state ligand field CD and MCD data indicate that the site is six-coordinate where the (5)E(g) excited-state splitting is 2033 cm(-)(1). VTVH MCD analysis of the ground state indicates that the site has negative zero-field splitting with a small rhombic splitting of the lowest doublet (delta = 1.6 +/- 0.3 cm(-)(1)). XAS pre-edge analysis also indicates a six-coordinate site while EXAFS analysis provides accurate bond lengths. Since previous spectroscopic analysis and the crystal structure of oxidized 3,4-PCD indicate a five-coordinate ferric active site, the results presented here show that the coordination number increases upon reduction. This is attributed to the coordination of a second solvent ligand. The coordination number increase relative to the oxidized site also appears to be associated with a large decrease in the ligand donor strength in the reduced enzyme due to protonation of the original hydroxide ligand.

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PubMed1999

MCD C-Term Signs, Saturation Behavior, and Determination of Band Polarizations in Randomly Oriented Systems with Spin S >/= (1)/(2). Applications to S = (1)/(2) and S = (5)/(2).

The magnetic circular dichroism (MCD) properties of a spin-allowed transition from an orbitally nondegenerate ground state manifold A to an orbitally nondegenerate excited state manifold J in the presence of spin-orbit coupling (SOC) are derived for any S >/= (1)/(2). Three physically distinct mechanisms are identified that lead to MCD intensity and depend on SOC between excited states which leads to a sum rule and SOC between the ground state and other excited states that leads to deviations from the sum rule. The model is valid for any symmetry of the magnetic coupling tensors and arbitrary transition polarizations. The S = (1)/(2) case is analytically solved, and the determination of linear polarizations from MCD saturation magnetization data is discussed. For all mechanisms the MCD intensity is proportional to the spin-expectation values of the ground state sublevels which are conveniently generated from a spin-Hamiltonian (SH). For Kramers systems with large zero-field splittings (ZFSs) this allows the contribution from each Kramers doublet to the total MCD intensity to be related through their effective g-values, therefore significantly reducing the number of parameters required to analyze experimental data. The behavior of high-spin systems is discussed in the limits of weak, intermediate, and strong ZFS relative to the Zeeman energy. The model remains valid in the important case of intermediate ZFS where the ground state sublevels may cross as a function of applied magnetic field and there are significant off-axis contributions to the MCD intensity due to a change of the electron spin quantization axis. The model permits calculation of MCD C-term signs from molecular wave functions, and explicit expressions are derived in terms of MOs for S = (1)/(2) and S = (5)/(2). Two examples from the literature are analyzed to demonstrate how the C-term signs can be evaluated by a graphical method that gives insight into their physical origin.

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PubMed1999

X-ray Absorption Spectra of the Oxidized and Reduced Forms of C112D Azurin from Pseudomonas aeruginosa.

The oxidized and reduced forms of a mutant of Pseudomonas aeruginosa azurin, in which the Cys112 has been replaced by an aspartate, have been studied by X-ray absorption spectroscopy. It is well established that the characteristic approximately 600 nm absorption feature of blue copper proteins is due to the S(Cys112) 3ppi --> Cu 3d(x)()()2(-)(y)()()2 charge-transfer transition. While other mutagenesis studies have involved the creation of an artificial blue copper site, the present work involves a mutant in which the native blue copper site has been destroyed, thus serving as a direct probe of the importance of the copper-thiolate bond to the spectroscopy, active site structure, and electron-transfer function of azurin. Of particular interest is the dramatic decrease in electron-transfer rates, both electron self-exchange (k(ese) approximately 10(5) M(-)(1) s(-)(1) wild-type azurin vs k(ese) approximately 20 M(-)(1) s(-)(1) C112D azurin) and intramolecular electron transfer to ruthenium-labeled sites (k(et) approximately 10(6) s(-)(1) wild-type azurin vs k(et) </= 10(3) s(-)(1) C112D azurin), which is observed in the mutant. These changes may be a reflection of significant differences in electronic coupling into the protein matrix (H(AB)) and/or in the reorganization energy (lambda). These effects can be probed by the use of Cu K-edge X-ray absorption spectroscopy, the results of which indicate both a decrease in the covalency of the active site and an expansion of approximately 0.2 Å in the Cu coordination sphere trigonal plane upon reduction of the C112D mutant.

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PubMed1998

Calculation of Zero-Field Splittings, g-Values, and the Relativistic Nephelauxetic Effect in Transition Metal Complexes. Application to High-Spin Ferric Complexes.

Equations are derived and discussed that allow the computation of zero-field splitting (ZFS) tensors in transition metal complexes for any value of the ground-state total spin S. An effective Hamiltonian technique is used and the calculation is carried to second order for orbitally nondegenerate ground states. The theory includes contributions from excited states of spin S and S +/- 1. This makes the theory more general than earlier treatments. Explicit equations are derived for the case where all states are well described by single-determinantal wave functions, for example restricted open shell Hartree-Fock (HF) and spin-polarized HF or density functional (DFT) calculation schemes. Matrix elements are evaluated for many electron wave functions that result from a molecular orbital (MO) treatment including configuration interaction (CI). A computational implementation in terms of bonded functions is outlined. The problem of ZFS in high-spin ferric complexes is treated at some length, and contributions due to low-symmetry distortions, anisotropic covalency, charge-transfer states, and ligand spin-orbit coupling are discussed. ROHF-INDO/S-CI results are presented for FeCl(4)(-) and used to evaluate the importance of the various terms. Finally, contributions to the experimentally observed reduction of the metal spin-orbit coupling constants (the relativistic nephelauxetic effect) are discussed. B3LYP and Hartree-Fock calculations for FeCl(4)(-) are used to characterize the change of the iron 3d radial function upon complex formation. It is found that the iron 3d radial distribution function is significantly expanded and that the expansion is anisotropic. This is interpreted as a combination of reduction in effective charge on the metal 3d electrons (central field covalence) together with expansive promotion effects that are a necessary consequence of chemical bond formation. The (3d) values that are important in the interpretation of magnetic data are up to 15% reduced from their free-ion value before any metal-ligand orbital mixing (symmetry-restricted covalency) is taken into account. Thus the use of free-ion values for spin-orbit coupling and related constants in the analysis of experimental data leads to values for MO coefficients that overestimate the metal-ligand covalency.

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PubMed1998

Effect of Protonation on Peroxo-Copper Bonding: Spectroscopic and Electronic Structure Study of [Cu(2)((UN-O-)(OOH)](2+).

Spectroscopic studies of a &mgr;-1,1-hydroperoxo-bridged copper dimer are combined with SCF-Xalpha-SW molecular orbital calculations to describe the vibrational and electronic structure of the hydroperoxo-copper complex and compare it to that of previously studied peroxo-copper species. Four vibrational modes of the Cu(2)OOH unit in the resonance Raman and infrared spectra are assigned on the basis of isotope shifts: nu(O-O) = 892 cm(-)(1), nu(as)(Cu-O) = 506 cm(-)(1), nu(s)(Cu-O) = 322 cm(-)(1), and nu(O-H) = 3495 cm(-)(1). The 892 cm(-)(1) O-O stretch of the &mgr;-1,1-hydroperoxo-bridged copper dimer is 89 cm(-)(1) higher than that of the unprotonated complex. Resonance Raman profiles of the 892 cm(-)(1) O-O stretch are used to assign an electronic absorption band at 25 200 cm(-)(1) (epsilon = 6700 M(-)(1) cm(-)(1)) to a hydroperoxide pi-to-Cu charge transfer (CT) transition. This band is approximately 5000 cm(-)(1) higher in energy than the corresponding transition in the unprotonated complex. The pi-to-Cu CT transition intensity defines the degree of hydroperoxide-to-copper charge donation, which is lower than in the unprotonated complex due to the increased electronegativity of the peroxide with protonation. The lower Cu-O covalency of this hydroperoxo-copper complex shows that the high O-O stretching frequency is not due to increased pi-to-Cu charge donation but rather reflects the direct effect of protonation on intra-peroxide bonding. Density functional calculations are used to describe changes in intra-peroxide and Cu-O bonding upon protonation of the peroxo-copper complex and to relate these changes to changes in reactivity.

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PubMed1996

Excited-State Distortions and Electron Delocalization in Mixed-Valence Dimers: Vibronic Analysis of the Near-IR Absorption and Resonance Raman Profiles of [Fe(2)(OH)(3)(tmtacn)(2)](2+).

The near-IR transition associated with valence delocalization in the class III mixed-valence dimer [Fe(2)(OH)(3)(tmtacn)(2)](2+) is studied using variable-temperature (VT) electronic absorption and resonance Raman (RR) spectroscopies to gain insight into the properties of electron delocalization in this dimer. Laser excitation into this absorption band leads to dominant resonance Raman enhancement of totally-symmetric [Fe(2)(OH)(3)](2+) core vibrational modes at 316 and 124 cm(-)(1), descriptions of which are calculated from a normal coordinate analysis. Vibronic analysis of the near-IR resonance Raman excitation profiles and VT-absorption bandshapes using an anharmonic excited-state model provides a description of the geometric distortions accompanying this excitation. The excited-state distortion is dominated by expansion of the [Fe(2)(OH)(3)](2+) core along the Fe.Fe axis, reflecting the significant Fe-Fe sigma --> sigma character of this transition. The ground-state sigma-interaction between the two metals has been identified as the orbital pathway for valence delocalization, and the sigma --> sigma distortion analysis is used to quantify the structural dependence of the electronic-coupling matrix element, H(AB), associated with this pathway. The dominant role of totally-symmetric nuclear coordinates in the absorption and RR spectroscopies of [Fe(2)(OH)(3)(tmtacn)(2)](2+) is also discussed in relation to the Q(-) vibrational coordinate and the vibronic spectroscopies of other class II and class III mixed-valence dimers. It is shown that intensity contributions from the Q(-) coordinate to the absorption and RR spectra of [Fe(2)(OH)(3)(tmtacn)(2)](2+) are small relative to those of the totally-symmetric coordinates due to the inefficient change-in-curvature mechanism by which the Q(-) coordinate gains intensity, compared to the efficient excited-state displacement mechanism allowed for totally-symmetric coordinates. This is in contrast with the dominance of the Q(-) coordinate over other totally-symmetric coordinates observed in intervalence transfer (IT) absorption and RR spectroscopies of class II mixed-valence complexes.

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