Biomedical subjects

Eric A Noe

Publications and source records attributed to Eric A Noe.

5 recordsLinked to original sources

PubMed2007

Interconversion of carbon sites in boat-chair-boat cyclodecane; conformations of chlorocyclodecane and cyclodecyl acetate.

Interconversion of carbon sites in boat-chair-boat (BCB) cyclodecane occurs by way of the twist-boat-chair (TBC) conformation, which predicts that C-1 exchanges with C-4, etc. The previously obtained low-temperature 13C spectra could be matched by assuming (1,4) or (1,3) exchange, but not (1,2) exchange. A free-energy barrier of 5.54 kcal/mol was obtained for conversion of BCB to TBC at -137.4 degrees C. The major conformation of chlorocyclodecane and cyclodecyl acetate is assigned to the IIIe BCB.

Journal Article↗

PubMed2006

Cyclodecyl 4-nitrophenylacetate.

Cyclodecyl 4-nitrophenylacetate, C18H25NO4, has its ten-membered ring in the expected diamond-lattice boat-chair-boat [2323] conformation, with the substituent 4-nitrophenylacetoxy group in the BCB IIIe position. The ester unit has the expected Z conformation, with an O=C-O-C torsion angle of -0.3 (3) degrees, and the connection to the benzene ring is nearly perpendicular to the ester, with an O=C-C-C torsion angle of 85.5 (2) degrees. An intermolecular contact exists between the ester C atom and a nitro O atom, having a C...O distance of 2.909 (2) A.

Journal Article↗

PubMed2006

Conformations of cycloundecane.

Cycloundecane (1) was shown to exist at -183.1 degrees C as a mixture of the [12323] (approximately 59%) and [335] (approximately 41%) conformations. Populations were determined from the (13)C NMR spectrum, and assignments were based on the (13)C spectra, calculated free energies and chemical shifts, and information from the literature, including X-ray studies of solid derivatives and calculated barriers.

Alkanes↗

PubMed2005

Conformational study of cis-1,4-di-tert-butylcyclohexane by dynamic NMR spectroscopy and computational methods. Observation of chair and twist-boat conformations.

[reaction: see text] Low-temperature 13C NMR spectra of cis-1,4-di-tert-butylcyclohexane (1) showed signals for the twist-boat (1a) and chair (1b) conformations. 13C NMR signals were assigned to specific carbons based on the different populations, different symmetries (time-averaged C(2v) for 1a and time-averaged C(s) for 1b), and calculated chemical shifts (GIAO, HF/6-311+G*). In addition to slow ring inversion and interconversion of the chair and twist-boat conformations, slow rotation of the tert-butyl groups was found. Most of the expected 13C peaks were observed. Free-energy barriers of 6.83 and 6.35 kcal/mol were found for interconversion of 1a (major) and 1b (minor) at -148.1 degrees C. Conformational space was searched with Allinger's MM3 and MM4 programs, and free energies were obtained for several low-energy conformations 1a-c. Calculations were repeated with ab initio methods up to the HF/6-311+G* level. Molecular symmetries, relative free energies, relative enthalpies and entropies, frequencies, and NMR chemical shifts were obtained. A boat conformation (1d; C(2v) symmetry) was generated and optimized as a transition state by ab initio, MM3, and MM4 calculations.

Journal Article↗

PubMed2003

Conformational study of 1,2-cycloundecadiene by dynamic NMR spectroscopy and computational methods.

Solutions of 1,2-cycloundecadiene in propane were studied by low-temperature (13)C NMR spectroscopy. A total of 17 peaks were observed at -166.7 degrees C, corresponding to two conformations of similar populations, one of C(1) symmetry (11 peaks) and the other of C(2) symmetry. The line shapes show that the predominant pathway for exchange of the topomers (C(1) and C(1)') of the C(1) conformation does not include the C(2) conformation. From the (13)C spectra, free-energy barriers of 8.38 +/- 0.15, 9.45 +/- 0.15, and 9.35 +/- 0.15 kcal/mol were determined for the C(1) to C(1)', (C(1) + C(1)') to C(2), and C(2) to (C(1) + C(1)') conversions, respectively, at -72.2 degrees C. The NMR results for this compound are discussed in terms of the conformations predicted by molecular mechanics calculations obtained with Allinger's MM3 program. Ab initio calculations of free energies are also reported at the HF/ 6-311G level for 25 conformations.

Carbon Isotopes↗