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Biomedical subjects

Françisco M Raymo

Publications and source records attributed to Françisco M Raymo.

At least 19 recordsLinked to original sources
PubMed2007

Synthesis and properties of benzophenone-spiropyran and naphthalene-spiropyran conjugates.

We have designed and synthesized four compounds integrating luminescent and photochromic components in their molecular skeletons. Two of them combine a nitrospiropyran photochrome with either one or two naphthalene fluorophores and can be prepared in three synthetic steps. The other two consist of a nitrospiropyran photochrome and a benzophenone phosphore connected by either ether or ester linkages and can be prepared in six or five, respectively, synthetic steps. The luminescent components of these assemblies are expected to transfer energy intramolecularly to the photochromic species upon excitation and encourage their photoisomerization. Consistently, the phosphorescence of the benzophenone units and the fluorescence of the naphthalene components are effectively quenched when these species are connected covalently to a nitrospiropyran. Nonetheless, the photoisomerization of the photochrome becomes significantly less efficient after the covalent attachment to the luminescent partner. The fraction of incident radiations absorbed by either the benzophenone or the naphthalene fragment does not promote the isomerization of the photochromic appendage. Instead, irreversible transformations occur upon irradiation of the luminophore-photochrome assemblies. Thus, the covalent attachment of a benzophenone or a naphthalene to a nitrospiropyran is not a viable strategy to improve the photocoloration efficiency of the photochromic component. Even although the very same luminophores are known to sensitize intermolecularly the isomerization of nitrospiropyrans, the transition to covalent luminophore-photochrome assemblies tends to promote degradation, rather than sensitization, upon irradiation.

Benzophenones↗
PubMed2006

pH-sensitive ligand for luminescent quantum dots.

We developed a strategy to switch the luminescence of semiconductor quantum dots with chemical stimulations. It is based on the photoinduced transfer of either energy from CdSe-ZnS core-shell quantum dots to [1,3]oxazine ligands or electrons from the organic to the inorganic components. The organic ligands incorporate a dithiolane anchoring group, an electron-rich indole, and a 4-nitrophenylazophenoxy chromophore in their molecular skeleton. Their adsorption on the surface of the quantum dots results in partial luminescence quenching. Electron transfer from the indole fragment to the nanoparticles is mainly responsible for the decrease in luminescence intensity. Upon addition of base, the [1,3]oxazine ring of the ligands opens to generate a 4-nitrophenylazophenolate chromophore, which absorbs in the range of wavelengths where the quantum dots emit. This transformation activates an energy-transfer pathway from the excited nanoparticles to the ligands. In addition, the oxidation potential of the ligand shifts in the negative direction, improving the efficiency of electron transfer. The overall result is a decrease in the luminescence quantum yield of 83%. Addition of acid also opens the [1,3]oxazine ring of the ligands. However, the resulting 4-nitrophenylazophenol does not absorb in the visible region and cannot accept energy from the excited nanoparticles. Furthermore, the oxidation potential shifts in the positive direction, lowering the electron-transfer efficiency. In fact, the luminescence quantum yield increases by 33% as a result of this transformation. These changes are fully reversible and can be exploited to probe the pH of aqueous solutions from 3 to 11. Indeed, our sensitive quantum dots adjust their luminescence in response to variations in pH within this particular range of values. Thus, our general design strategy can eventually lead to the development of pH-sensitive luminescent probes for biomedical applications based on the unique photophysical properties of semiconductor quantum dots.

Journal Article↗
PubMed2006

A mechanism to signal receptor-substrate interactions with luminescent quantum dots.

Semiconductor quantum dots are becoming valuable analytical tools for biomedical applications. Indeed, their unique photophysical properties offer the opportunity to design luminescent probes for imaging and sensing with unprecedented performance. In this context, we have identified operating principles to transduce the supramolecular association of complementary receptor-substrate pairs into an enhancement in the luminescence of sensitive quantum dots. Our mechanism is based on the electrostatic adsorption of cationic quenchers on the surface of anionic quantum dots. The adsorbed quenchers suppress efficiently the emission character of the associated nanoparticles on the basis of photoinduced electron transfer. In the presence of target receptors able to bind the quenchers and prevent electron transfer, however, the luminescence of the quantum dots is restored. Thus, complementary receptor-substrate pairs can be identified with luminescence measurements relying on our design logic. In fact, we have demonstrated with a representative example that our protocol can be adapted to signal protein-ligand interactions.

Ligands↗
PubMed2006

Optical processing with photochromic switches.

The absorbance, fluorescence, and refractive index of a photochromic material can be modulated under the influence of optical stimulations. The reversible modification of these macroscopic properties is a result of photoinduced transformations at the molecular level. These processes can be exploited to mediate the interplay of optical signals and offer the opportunity to design and implement photonic devices for optical processing based on molecular components.

Journal Article↗
PubMed2006

pH-sensitive quantum dots.

We have designed organic ligands able to adsorb on the surface of CdSe-ZnS core-shell quantum dots and switch the luminescence of the inorganic nanoparticles in response to hydroxide anions. These compounds incorporate a [1,3]oxazine ring within their molecular skeleton, which reacts with the nucleophilic hydroxide anion to generate a 4-nitrophenylazophenolate chromophore. The chromogenic transformation activates an energy transfer pathway from the quantum dot to the adsorbed chromophores. As a result, the luminescence intensity of the coated nanoparticles decreases significantly in the presence of hydroxide anions. In fact, this mechanism can be exploited to probe the pH of aqueous solutions. Indeed, an increase in pH from 7.1 to 8.5 translates into a 35% decrease in the luminescence intensity of the sensitive quantum dots. Thus, our operating principles for luminescence switching can efficiently transduce a chemical stimulation into a change in the emissive response of semiconductor nanoparticles. In principle, this protocol can be extended from hydroxide anions to other target analytes with appropriate adjustments in the molecular design of the chromogenic ligands. It follows that luminescent chemosensors, based on the unique photophysical properties of semiconductor quantum dots, can eventually evolve from our design logic and choice of materials.

Journal Article↗
PubMed2006

Chromogenic oxazines for cyanide detection.

[reaction: see text] We have designed two heterocyclic compounds for the colorimetric detection of cyanide. The skeleton of both molecules fuses a benzooxazine ring to an indoline fragment and can be assembled efficiently in three synthetic steps starting from commercial precursors. The two compounds differ in the nature of the substituent on the carbon atom at the junction of the fused heterocycles, which can be either a methyl or a phenyl group. In the presence of cyanide, both molecules are converted quantitatively into cyanoamines with the concomitant appearance of an intense band in the visible region of the absorption spectrum. The developing absorption is a result of the opening of the benzooxazine ring with the formation of a 4-nitrophenylazophenolate chromophore. Nuclear magnetic resonance spectroscopy and X-ray crystallographic analyses demonstrate that the covalent attachment of a cyanide anion to the indoline fragment is responsible for these transformations. The chromogenic process is particularly fast for the methyl-substituted oxazine and can be exploited to detect micromolar concentrations of cyanide in water. Furthermore, the colorimetric response of this compound to cyanide does not suffer the interference of the halide anions, which instead are known to complicate the detection of cyanide in conventional sensing protocols. Thus, our mechanism and compounds for the colorimetric identification of cyanide can lead to the development of practical strategies for the convenient determination of this toxic anion in aqueous environments.

Journal Article↗
PubMed2005

Supramolecular assembly of 2,7-dimethyldiazapyrenium and cucurbit[8]uril: a new fluorescent host for detection of catechol and dopamine.

The formation of a highly stable inclusion complex between 2,7-dimethyldiazapyrenium (Me(2)DAP(2+)) and the cucurbit[8]uril host (CB8) was demonstrated by X-ray crystallography; MALDI-TOF mass spectrometry; and (1)H NMR, electronic absorption, and emission spectroscopy. The equilibrium association constant was determined to be 8.9(+/-0.2)x10(5) L mol(-1) from UV-visible data and 8.4(+/-1.5) x 10(5) L mol(-1) from fluorescence data. The Me(2)DAP(2+).CB8 inclusion complex acted as a host to bind compounds containing aromatic pi-donor moieties (D), such as catechol and dopamine. This point was demonstrated by (1)H NMR spectroscopy, and electrochemical and emission measurements. Fluorescence detection of the Me(2)DAP(2+).D.CB8 ternary complexes was evident in aqueous solution and on the surface of silica particles, to which fluorescent diazapyrenium units had been covalently immobilized.

Bridged-Ring Compounds↗
PubMed2005

Colorimetric detection of cyanide with a chromogenic oxazine.

[reaction: see text] We have designed a chromogenic oxazine for the colorimetric detection of cyanide. Indeed, the [1,3]oxazine ring of our compound opens to form a 4-nitrophenylazophenolate chromophore in response to cyanide. This quantitative chromogenic transformation permits the detection of micromolar concentrations of cyanide in water. Furthermore, our chromogenic oxazine is insensitive to the presence of large concentrations of fluoride, chloride, bromide, or iodide anions, which are generally the principal interferents in the colorimetric detection of cyanide.

Buffers↗
PubMed2005

Fast and stable photochromic oxazines.

We have designed and synthesized two photochromic compounds incorporating fused indoline and benzooxazine fragments. Variable-temperature 1H NMR spectroscopy demonstrates that their central [1,3]oxazine ring opens thermally with free energy barriers ranging from 14 to 19 kcal mol(-1). The ring-opened species reverts rapidly to the original isomer and can only be detected after chemical trapping. Specifically, the nucleophilic attack of a hydroxide anion to the indolium cation of the ring-opened species prevents re-isomerization. Laser excitation of both compounds induces the opening of the [1,3]oxazine ring in less than 6 ns with quantum yields up to 0.1. The photoinduced ring opening generates a 4-nitrophenolate chromophore, which absorbs strongly at 440 nm. The photogenerated species reverts to the original form with a lifetime of 22 ns for both compounds. Thus, these transformations can be exploited to interconvert the two isomers of each species with nanosecond switching speeds. Furthermore, thousands of switching cycles can be repeated consecutively without any sign of degradation, even in the presence of molecular oxygen. These processes can be reproduced efficiently in poly(methyl methacrylate) matrixes. Under these conditions, the thermal re-isomerization occurs with biexponential kinetics in submillisecond time scales. In principle, the fast isomerization kinetics and excellent fatigue resistance of both compounds offer the opportunity to modulate rapidly and efficiently a variety of molecular and macroscopic properties. Thus, our molecular design can evolve into the realization of a new family of photochromic compounds and materials with promising photoresponsive character.

Journal Article↗
PubMed2005

Fluorescence modulation with photochromic switches.

Photochromic compounds change their color under illumination. In most instances, a colorless state switches to a colored one upon ultraviolet irradiation. The photogenerated species reverts to the original one either by thermal means or upon visible irradiation. These reversible transformations are accompanied by pronounced structural and electronic modifications, which often alter the ability of the photochromic compound to emit light. Under these conditions, the photoinduced and reversible interconversion of the colorless and colored states results in the modulation of the fluorescence intensity. Alternatively, fluorescence modulation can be implemented by attaching covalently a fluorescent group to a photochromic compound. Photoinduced changes in the dipole moment or conjugation of the photochromic component can then be designed to alter the emissive behavior of the fluorescent appendage. Similarly, photoinduced shifts in the redox potential or absorption wavelength of the photochromic fragment can be engineered to activate electron or energy, respectively, transfer pathways. Both processes can efficiently quench the fluorescence of the emissive component. Furthermore, the reversible absorption changes of a photochromic compound can effectively filter the emission of a compatible, but separate, fluorophore as long as the emission bands of the latter overlap the absorption bands of one of the two states of the former. When this design requirement is satisfied, fluorescence modulation can be achieved even if the two functional components are operated in distinct environments. Thus, either one of these ingenious mechanisms can be exploited to regulate the emissive behavior of collections of molecules in solution or even in rigid matrixes. In fact, the investigation of these fascinating systems can eventually lead to novel photoresponsive materials for photonic applications, while contributing to advance our basic understanding of the photochemical and photophysical properties of organic compounds.

Journal Article↗
PubMed2005

Fluorescent diazapyrenium films and their response to dopamine.

Experimental protocols for the preparation of 2,7-diazapyrenium films on glass, quartz, and silica in one or two steps have been developed. The one-step procedures involve the adsorption of preformed 2,7-diazapyrenium dications with trimethoxysilane appendages to the hydroxylated substrates. The two-step procedures consist in the formation of interfacial polysiloxanes with pendent chloromethyl groups and their subsequent coupling to monoalkylated 2,7-diazapyrene derivatives. For the modification of the glass slides, the silane building blocks have been copolymerized with Si(OEt)4. The transmission absorption spectra of the coated glass and quartz slides all reveal the characteristic bands of the 2,7-diazapyrenium chromophores. Combustion analyses confirm the adsorption of the 2,7-diazapyrenium dications on the silica particles. A comparison of the surface coverages of all films indicates that the one-step procedures are significantly more efficient than their two-step counterparts. Furthermore, the copolymerization of the silane building blocks with Si(OEt)4 translates into an increase in 2,7-diazapyrenium surface coverage of approximately 1 order of magnitude. The emission and excitation spectra of all modified substrates reveal the characteristic bands of the 2,7-diazapyrenium fluorophores. The fluorescence quantum yield, however, decreases as the surface coverage increases. Presumably, interactions between adjacent fluorophores encourage nonradiative deactivation pathways. With the exception of the glass slides modified in two steps, all films respond to the presence of dopamine, in aqueous environments at neutral pH, with pronounced decreases in emission intensity. The association of the 2,7-diazapyrenium acceptors and dopamine donors at the solid/liquid interface is responsible for fluorescence quenching. The glass slides and silica particles modified in one step are the most sensitive substrates and respond to sub-millimolar concentrations of dopamine with large changes in emission intensity. Furthermore, their fluorescence is not affected by relatively large concentrations of ascorbic acid, which is the main interferent in conventional dopamine detection protocols. Thus, these results demonstrate that the supramolecular association of 2,7-diazapyrenium dications and pi-electron rich substrates can be reproduced successfully at solid/liquid interfaces and suggest that the unique properties of 2,7-diazapyrenium films might lead to dopamine-sensing schemes based on fluorescence measurements.

Dopamine↗
PubMed2005

Self-assembling bipyridinium multilayers.

The identification of strategies to assemble nanostructured films with engineered properties on solid supports can lead to the development of innovative functional materials. In particular, the self-assembly of electroactive multilayers from simple molecular building blocks on metallic electrodes can offer the opportunity to regulate the exchange of electrons between the underlying substrate and solution species. In this context, we designed an experimental protocol to prepare electroactive films from bipyridinium bisthiols. Specifically, we found that a compound incorporating two bipyridinium dications at its core and terminal thiol groups self-assembles into remarkably stable multilayers on polycrystalline gold. The surface coverage of the resulting films can be regulated by adjusting the exposure time of the gold substrate to the bipyridinium solution. Control experiments with appropriate model compounds demonstrate that both bipyridinium dications as well as both thiol groups must be present in the molecular skeleton to encourage multilayer growth. The resulting films transport electrons efficiently from the electrode surface to the film/solution interface. Indeed, they mediate the reduction of Ru(NH(3))(6)(3+) in the electrolyte solution but prevent the back oxidation of the resulting Ru(NH(3))(6)(2+). Furthermore, these polycationic bipyridinium films capture electrostatically Fe(CN)(6)(4-) tetraanions, which can also be exploited to transport electrons across the interfacial assembly. In fact, electrons can travel through the bipyridnium(2+/1+) couples to redox probes in solution and then back to the electrode through the Fe(CN)(6)(4/3-) couples. Thus, our original approach to self-assembling multilayers can produce stable electroactive films with unique electron transport properties, which can be regulated with a careful choice of the anionic components.

Journal Article↗
PubMed2005

A fast and stable photochromic switch based on the opening and closing of an oxazine ring.

[reaction: see text] We have designed a molecular switch based on the photoinduced opening and thermal closing of an oxazine ring. Ultraviolet excitation of this molecule induces the cleavage of a [C-O] bond to form a p-nitrophenolate chromophore in less than 10 ns with a quantum yield of ca. 0.1. The photogenerated isomer reverts thermally to the original oxazine within 50 ns. Our photochromic switch survives more than 3000 excitation cycles without decomposing, even in air-saturated solutions.

Journal Article↗
PubMed2004

Electron transport in bipyridinium films.

Bipyridinium dications are versatile building blocks for the assembly of functional materials. In particular, their reliable electrochemical response has encouraged the design of electroactive films. Diverse and elegant experimental strategies to coat metallic and semiconducting electrodes with bipyridinium compounds have, in fact, emerged over the past two decades. The resulting interfacial assemblies span from a few nanometers to several micrometers in thickness. They incorporate from a single molecular layer to large collections of entangled polymer chains. They transport electrons efficiently from the electrode surface to the film/solution interface and vice versa. Electron self-exchange between and the physical diffusion of the bipyridinium building blocks conspire in defining the charge transport properties of these fascinating electroactive assemblies. Often, the matrix of electron-deficient bipyridinium dications can be exploited to entrap electron-rich analytes. Electrostatic interactions promote the supramolecular association of the guests with the surface-confined host matrix. Furthermore, chromophoric sites can be coupled to the bipyridinium dications to produce photosensitive arrays capable of harvesting light and generating current. Thus, thorough investigations on the fundamental properties of these functional molecule-based materials can lead to promising applications in electroanalysis and solar energy conversion, while contributing to advances in the basic understanding of electron transport in interfacial assemblies.

Electrochemistry↗
PubMed2003

A switch in a cage with a memory.

[structure: see text] Chemical and optical stimulations control the interconversion of a three-state molecular switch trapped inside a silica monolith. The resulting absorbance changes in the visible region can be exploited to reproduce a sequential logic operator with one optical input and one optical output. This strategy to transfer operating principles for digital processing from bulk solutions to rigid materials can lead to the development of chemical logic gates based on functional solid components.

Journal Article↗
PubMed2003

Digital processing with a three-state molecular switch.

Certain molecular switches respond to input stimulations producing detectable outputs. The interplay of these signals can be exploited to reproduce basic logic operations at the molecular level. The transition from simple logic gates to complex digital circuits requires the design of chemical systems able to process multiple inputs and outputs. We have identified a three-state molecular switch that responds to one chemical and two optical inputs producing two optical outputs. We have encoded binary digits in its inputs and outputs applying positive logic conventions and demonstrated that this chemical system converts three-digit input strings into two-digit output strings. The logic function executed by the three-state molecular switch is equivalent to that of a combinational logic circuit integrating two AND, two NOT, and one OR gate. The three states of the molecular switch are a colorless spiropyran, a purple trans-merocyanine, and its yellow-green protonated form. We have elucidated their structures by X-ray crystallography, (1)H NMR spectroscopy, COSY and NOE experiments, as well as density functional calculations. The three input stimulations controlling the interconversion of the three states of the molecular switch are ultraviolet light, visible light, and H(+). The two outputs are the absorption bands in the visible region of the two colored states of the molecular switch. We have monitored the switching processes and quantified the associated thermodynamic and kinetic parameters with the aid of (1)H NMR and visible absorption spectroscopies.

Journal Article↗
PubMed2003

Memory effects based on intermolecular photoinduced proton transfer.

We have identified a strategy to communicate a chemical signal between two independent molecular components. One of them is a photoactive merocyanine that switches to a spiropyran, releasing a proton, when stimulated with visible light. The other is a 4,4'-pyridylpyridinium monocation that captures the released proton, producing an electroactive 4,4'-bipyridinium dication. Under the irradiation conditions employed, the photoinduced transformation requires ca. 15 min to reach a photostationary state. In the dark, the ensemble of communicating molecules reequilibrates to the original state in ca. 5 days. These processes can be monitored following the photoinduced enhancement and thermal decay, respectively, of the current for the monolectronic reduction of the 4,4'-bipyridinium dication. The pronounced difference in time scale for the current enhancement and decay steps can be exploited to implement a memory element with a bit retention time of 11 h. A bit of information can be written optically in the chemical system and it can be read electrically and nondestructively. The memory can be reset, extending its permanence in the dark beyond the bit retention time. A binary logic analysis of the signal transduction operated by the communicating molecules reveals the characteristic behavior of sequential logic operators, which are the basic components of digital memories.

Benzopyrans↗