Biomedical subjects

Frank Stahl

Publications and source records attributed to Frank Stahl.

9 recordsLinked to original sources

PubMed2007

Fast and efficient screening system for new biomaterials in tissue engineering: a model for peripheral nerve regeneration.

The use of three-dimensional biodegradable matrices is one major issue in tissue engineering. Numerous materials, fabrication techniques, and modifications have been used and tested in different areas of tissue engineering recently. But nevertheless, technology is far from being optimized and optimal constructs with bioidentical and mechanical properties have not been described in the literature so far. Hence, there is great demand of new suitable biomaterials for tissue engineering applications. In this study, a fast and efficient screening system for initial testing of biomaterials for cell culture application was developed. The set up for the screening system and the decision criteria applied for the determination of suitability of new materials are presented. Hep-G2 and PC-12 cells were seeded onto different matrices and cultured over a period of 2 weeks. The viability of the cells was monitored via the MTT assay. Cell spreading was investigated by DAPI-staining of cell nuclei. Furthermore, the adhesion of the cells on the different matrices was examined by counting the number of attached cells. With these general assays a classification of materials is possible with regard to their suitability. Optimal cell models must be chosen for the defined applications and at least two cell lines are necessary for a differentiating interpretation.

Animals↗

PubMed2007

Cultivation of MC3T3-E1 cells on a newly developed material (Sponceram) using a rotating bed system bioreactor.

The influence of a 3D macroporous scaffold (Sponceram) on the differentiation process into bone cells was investigated under static conditions in cell culture dishes. Furthermore, cultivations were performed using a new bioreactor system in the presence or absence of bone morphogenetic protein 2 (BMP-2). Preosteoblastic MC3T3-E1 cells were first cultured on Sponceram scaffolds in 96-well dishes using standard medium, differentiation medium and BMP-2 medium. Cell proliferation showed a similar course for all conditions used. Alkaline phosphatase (AP) activity resulted in a maximum at day 5 in the presence of BMP-2. Two bioreactor cultivations were performed in a BIOSTAT Bplus RBS (rotating bed system) 500 on Sponceram carrier discs. One cultivation was performed using standard medium. The second one was used with the same medium with BMP-2 substituted. Significant calcification of the extracellular matrix in the presence of BMP-2 occurred but even in the absence of BMP-2 mineralization was observed. mRNA expression of collagen I, osteocalcin and bone sialoprotein was detected after both reactor cultivations. This study demonstrates that macroporous Sponceram is suitable for the cultivation and differentiation of MC3T3-E1 cells into the osteoblastic phenotype. The results of the bioreactor cultivation revealed that the scaffold promoted the differentiation process even in the absence of BMP-2.

3T3 Cells↗

PubMed2005

Impact of microarray technology in nutrition and food research.

Microarrays have become standard tools for gene expression profiling as the mRNA levels of a large number of genes can be measured in a single assay. Many technical aspects concerning microarray production and laboratory usage have been addressed in great detail, but it remains still crucial to establish this technology in new research fields such as human nutrition and food-related areas. The correlation between diet and inter-individual variation in gene expression is an important and relatively unexplored issue in human nutrition. Therefore, nutritionists changed their research field dramatically from epidemiology and physiology towards the "omics" sciences. Nutrigenomics as a field of research is based on the complete knowledge of the human genome and refers to the entire spectrum of human genes that determine the interactions of nutrition with the organism. Nutrigenetics is based on the inter-individual, genetically determined differences in metabolism. Nutrigenomics and nutrigenetics carry the hope that individualized diet can improve human health and prevent nutrition-related diseases. In this article we give an overview of current DNA and protein microarray techniques (including fabrication, experimental procedure and data analysis), we describe their applications to nutrition and food research and point out the limitations, problems and pitfalls of microarray experiments.

Confidentiality↗

PubMed2003

Identification of human cells in brain xenografts and in neural co-cultures of rat by in situ hybridisation with Alu probe.

Transplantation of human cells into animal models of neurodegenerative disorders is an important scientific application to analyse the survival and developmental capacity of grafted human cells under in vivo conditions. It is critical, therefore, to have a reliable method to distinguish between human and animal cells. In the present study, we describe a combined in situ hybridisation and immunocytochemistry method for the identification of human cells in cultured rat brain cells and xenografts. The specific Alu probe we utilised, which corresponds to the consensus sequence of human Alu repeats was evaluated by southern blot hybridisation of zoo blot and by in situ hybridisation of primary and neoplastic cells from man, rat, mouse, and hamster. This method allows a definite identification of human cells in neural xenografts and, in combination with additional in situ techniques, a further detection of grafted cells.

Alu Elements↗

PubMed2003

Towards graphite: magnetic properties of large polybenzenoid hydrocarbons.

The geometries of four different series of D(6h)-symmetric polybenzenoid hydrocarbons (PBH) up to and including C(222)H(42) have been optimized at the B3LYP/6-31G(d) level of theory. Excluding C(48)H(24) and C(138)H(42), which have D(3d) minima due to 1,5 H...H repulsions between adjacent perimeter rings, optimized geometries are planar D(6h) minima. Nucleus Independent Chemical Shifts (NICS), at the same level, indicate the presence of individual aromatic rings, which correspond to Clar's qualitative sextets rule (Clar, E. TheAromatic Sextet; Wiley: London, 1972). NICS and the Clar valence electron topologies agree perfectly in the molecule plane; however, the NICS values computed in parallel planes further away from the molecular surface converge, indicating the presence of a uniform magnetic shielding field. For each series, PBH total NICS values (i.e., the sum of NICS values for all rings in the PBH) correlate linearly with the number of carbon atoms, indicating constant magnetic field development within a series. The C-C lengths depend on their proximity to the more olefinic rich molecular perimeters. However, the large PBH (> or =C(48)H(24)) internal C-C distances converge to approximately 1.426 A. In agreement with Clar's rule, HF/6-31G(d)//B3LYP/6-31G(d) vertical ionization potentials and B3LYP/6-31G(d) HOMO-LUMO gaps are largest within the "fully benzenoid" series, where all carbon atoms are members of a single sextet. The largest members of the four series studied are predicted to exhibit semiconducting properties.

Journal Article↗

PubMed2003

Comparison of primary human hepatocytes and hepatoma cell line Hepg2 with regard to their biotransformation properties.

Cultures of primary hepatocytes and hepatoma cell line HepG2 are frequently used in in vitro models for human biotransformation studies. In this study, we characterized and compared the capacity of these model systems to indicate the presence of different classes of promutagens. Genotoxic sensitivity, enzyme activity, and gene expression were monitored in response to treatment with food promutagens benzo[a]pyrene, dimethylnitrosamine (DMN), and 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP). DNA damage could be detected reliably with the comet assay in primary human hepatocytes, which were maintained in sandwich culture. All three promutagens caused DNA damage in primary cells, but in HepG2 no genotoxic effects of DMN and PhIP could be detected. We supposed that the lack of specific enzymes accounts for their inability to process these promutagens. Therefore, we quantified the expression of a broad range of genes coding for drug-metabolizing enzymes with real-time reverse transcription-polymerase chain reaction. The genes code for cytochromes p450 and, in addition, for a series of important phase II enzymes. The expression level of these genes in human hepatocytes was similar to those previously reported for human liver samples. On the other hand, expression levels in HepG2 differed significantly from that in human. Activity and expression, especially of phase I enzymes, were demonstrated to be extremely low in HepG2 cells. Up-regulation of specific genes by test substances was similar in both cell types. In conclusion, human hepatocytes are the preferred model for biotransformation in human liver, whereas HepG2 cells may be useful to study regulation of drug-metabolizing enzymes.

7-Alkoxycoumarin O-Dealkylase↗

PubMed2002

Resurrection of neutral tris-homoaromaticity.

Neutral in-plane tris-homoaromaticity is evaluated in tris(bismethano)benzene (15) and modifications of this parent structure in which the pi-orbitals might interact in the plane established by the unsaturated carbon atoms (in-plane conjugation). On the basis of magnetic susceptibility exaltation, nucleus-independent shift (NICS), and aromatic stabilization energy (ASE, evaluated via homodesmotic and isodesmic equations using B3LYP/6-311+G + ZPVE energies, as well as by MM3 and MM4 force field computations), we identified triene 17, a triply bridged analogue of 15, as the system where homoaromaticity is most effective. The NICS(total) in the center of 17 is -30.1 ppm and the diatropic pi-contribution is -18.0 ppm. This structure possesses more than one-third of the aromatic stabilization of benzene and is the best candidate for neutral tris-homoaromaticity ever proposed. The previously described tris-(bismethano)-benzene (15) also shows homoaromaticity but to a smaller extent compared to 17. Structure 18, which is closely related to 17, also is significantly homoaromatic but, as evaluated by MM3, strain partially counteracts the stabilizing effects from homoconjugation. Such a counteracting increase in strain largely cancels or even overwhelms the stabilization from homoconjugation in all other species considered in this study.

Journal Article↗

PubMed2002

Magnetic properties and aromaticity of o-, m-, and p-benzyne.

The relative aromaticities of the three singlet benzyne isomers, 1,2-, 1,3-, and 1,4-didehydrobenzenes have been evaluated with a series of aromaticity indicators, including magnetic susceptibility anisotropies and exaltations, nucleus-independent chemical shifts (NICS), and aromatic stabilization energies (all evaluated at the DFT level), as well as valence-bond Pauling resonance energies. Most of the criteria point to the o-benzyne<m-benzyne<p-benzyne aromaticity order, whereas the relative aromaticity of each isomer with respect to benzene depends on the aromaticity criterion. An additional aromaticity evaluation involved the transition state of the Bergman cyclization of (Z)-hexa-1,5-diyn-3-ene which yields p-benzyne. Dissected NICS calculations reveal an aromatic transition state with a larger total NICS but a smaller NICS(pi) component and thus lower aromaticity than benzene.

Journal Article↗

PubMed2002

Aromaticity of the Bergman, Myers-Saito, Schmittel, and directly related cyclizations of enediynes.

Aromaticity criteria (magnetic susceptibility exaltations, nucleus independent chemical shifts (NICS), and aromatic stabilization energy (ASE) evaluations) for enediyne and enyne-allene cyclizations evaluated at (UBS)-BLYP/6-31G* all agree that the degrees of cyclic electron delocalization of the benzenoid systems formed by the Bergman (3) and Myers-Saito reactions (5) are comparable to benzene. The reaction enthalpy differences between the parent cyclizations and their benzannelated analogues are not entirely due to disparities in gained ASE during the reactions. The alternative formation of fulvene biradicals is not accompanied by favorable aromatic effects.

Journal Article↗