Biomedical subjects

G Z Yang

Publications and source records attributed to G Z Yang.

At least 19 recordsLinked to original sources

PubMed2002

Automatic MRI adipose tissue mapping using overlapping mosaics.

This paper presents an automatic method of correcting non-uniform RF coil response for the classification of body composition using MR imaging. By linear mosaic modelling, the smoothly but non-linearly varying bias field, which modulates tissue intensities within the image, was corrected. The overlapping between adjacent mosaics ensured consistent segmentation of body fat content and the effectiveness of the technique was validated by both phantom and in vivo experiments. Ten whole body composition data sets, each with 39 trans-axial slices, were acquired. Automatic segmentation results using the proposed technique were compared with those from manual delineations. The automatic segmentation method was found to be highly accurate and the mean percentage error between the two methods was less than 1.5%.

Adipose Tissue↗

PubMed2001

Echo-planar magnetic resonance myocardial perfusion imaging: parametric map analysis and comparison with thallium SPECT.

Magnetic resonance (MR) perfusion FLASH imaging has been used for assessing coronary artery disease (CAD). Echo-planar MR techniques have advantages in speed and in making MR perfusion imaging results more clinically accessible through parametric maps, but have not been previously assessed. We implemented a spin-echo, echo-planar MR technique and applied it at rest and during adenosine stress in 26 patients with CAD and abnormal thallium single-photon-emission computed tomography (SPECT), and analyzed the results by using a newly developed parametric map analysis of time to peak, peak intensity, and slope of contrast washin. The results were compared with the results of conventional visual analysis of the perfusion cine series. For detecting abnormal coronary territories, MR and SPECT were comparable for sensitivity, specificity, and accuracy (thallium, 70%, 78%, and 73%; MR, 79% 83%, and 80%; P = NS). There was good agreement between thallium and MR during stress (kappa = 0.49), but defects were larger by MR (2.4 vs. 3.1 segments for slope; P < 0.01). Additional segments were detected at rest by MR (58 for slope vs. 25 for thallium), which correlated with areas that became abnormal with stress in the thallium (sensitivity, 100%; specificity, 63%). The parametric maps were easier and faster to interpret than review of the original first-pass series of images (chi2 = 10.8; P < 0.04). The diagnostic performance of echo-planar perfusion MR and SPECT was similar, and combining the results with parametric mapping was useful for interpretation and considerably improved data display for clinical interpretation. MR, however, was faster and yielded images of higher resolution with no radiation burden. In multislice mode, these new MR techniques may have clinical value.

Aged↗

PubMed2001

Multiresolution image registration for two-dimensional gel electrophoresis.

In proteomic research, two-dimensional electrophoresis (2-D) is an important tool for investigating differential patterns of qualitative and quantitative protein expression. The strength of the technique is due to its unrivalled power of being able to separate simultaneously thousands of proteins. The key to the comparison of 2-D protein profiles, however, lies in the use of a fast and robust image matching process which is essential to the subsequent quantification procedure. To satisfy the growing demand for a robust and fully automatic method of matching 2-D gel protein separation profiles, we describe in this paper a novel registration technique based on image intensity distribution rather than selected features. The method uses a multiresolution representation of the gel profiles and exploits the fact that coarse approximations to the optimal matching can be extracted efficiently from low-resolution images. This permits the removal of misalignments at different scales in a systematic manner and the strength of the new method has been confirmed by a double blind trial of 111 2-D gel pairs. The proposed method requires neither landmarks nor an a priori image alignment, and takes about five seconds for processing a typical gel pair on a standard personal computer.

Algorithms↗

PubMed2001

Dual contrast TrueFISP imaging for left ventricular segmentation.

Based on varying tissue contrasts at different RF flip angles, a new TrueFISP imaging strategy for cardiac function measurement is presented. A single breath-hold dual RF flip angle cine multi-slice TrueFISP imaging sequence was implemented which provides a significant increase in signal contrast between blood and myocardium. The increase in image contrast combined with different characteristics in RF response facilitates the delineation of cardiovascular borders. Based on this imaging strategy it is demonstrated how a simple 2D histogram clustering algorithm can be used for the fully automatic segmentation of the left ventricular (LV) blood pool. The method is validated with data acquired from 10 asymptomatic subjects, and the results are shown to be comparable to that of manual delineation by experienced observers.

Algorithms↗

PubMed2001

Tracking local volume 3D-echo-planar coronary artery imaging.

Aiming for robust high-resolution free respiration coronary artery imaging, localized tracking volume selective 3D-EPI at spatial resolution 1.25 x 1.25 x 3 mm and temporal resolution 65 ms was evaluated in 14 normal subjects. Subject-specific motion tracking factors were measured between diaphragm navigator and coronary artery in S-I and A-P directions. Imaging was repeated with and without tracking, accepting 128 cardiac cycles over a 20-mm range from free breathing. Reference images with minimal respiratory motion (5-mm range) used LED-guided multiple breathholds. Depending on accurate motion measurement, coronary arteries were imaged with tracking, in a 20-mm range of free breathing, with increased scan efficiency but without significant loss of image quality compared to multiple breathhold imaging.

Coronary Vessels↗

PubMed2001

Two novel phenolic triterpenes from Tripterygium wilfordii.

Two novel phenolic triterpenes were isolated from Tripterygium wilfordii Hook. f., their structures were identified to be 2,3-dihydroxy-1,3,5(10),8-tetra-ene-6alpha-(2'-hydroxyethyl)-24-nor-D:A-friedooleanane-29-oic acid 1, named triptotin F, and 2,3-dihydroxy-1,3,5(10),8-tetra-ene-6beta-(2'-hydroxyethyl)-24-nor-D:A-friedooleanane-29-oic acid 2, named triptotin G on the basis of spectroscopic studies.

Celastraceae↗

PubMed2001

ERS transform for the automated detection of bronchial abnormalities on CT of the lungs.

The identification of bronchi on Computed Tomography (CT) images of the lungs provides valuable clinical information in patients with suspected airways diseases including bronchiectasis, emphysema, or constrictive obliterative bronchiolitis. The automated recognition of the airways is, therefore, an important part of a diagnosis aid system for resolving potential ambiguities associated with intensity-based feature extractors. On CT images, near-perpendicular cross sections of bronchi normally appear as elliptical rings and this paper presents a novel technique for their recognition. The proposed method, the edge-radius-symmetry (ERS) transform, is based on the analysis of the distribution of edges in local polar coordinates. Pixels are ranked according to local edge (E) strength, radial (R), uniformity and local symmetry (S). A discrete implementation of the technique is provided which reduces the computational cost of the ERS transform by using a geometric approximation of the intensity patterns. The identification of the adjacent pulmonary vessels with template matching then allows for the automated measurement of bronchial dilatation and bronchial wall thickening. Computationally, the method compares favorably with other methods such as the Hough transform. Noise-sensitivity of the technique was evaluated on a set of synthetic images and nine patients under investigation for suspected airways disease. Agreement for the automated scoring of the presence and severity of bronchial abnormalities was demonstrated to be comparable to that of an experienced radiologist (kappa statistics kappa > 0.5 ).

Bronchial Diseases↗

PubMed2001

Rigorous electromagnetic analysis of a microcylindrical axilens with long focal depth and high transverse resolution.

We first present nonparaxial designs for a microcylindrical axilens with different long focal depths and rigorously analyze electromagnetic field distributions of the axilens using integral equations and the boundary-element method. Numerical results show that the designed axilenses indeed have the special feature of attaining a long focal depth while keeping high transverse resolution for numerical apertures of 2.4, 2.0, and 1.0. The ratio between the extended focal depth of the designed axilens and the focal depth of the conventional focal lens is 1.41, the corresponding maximal extended focal depth of the axilens can reach 28 microm, and the spot size of the focal beam is approximately 10 microm over the focal range.

Journal Article↗

PubMed2000

Asymmetric redirection of flow through the heart.

Through cardiac looping during embryonic development, paths of flow through the mature heart have direction changes and asymmetries whose topology and functional significance remain relatively unexplored. Here we show, using magnetic resonance velocity mapping, the asymmetric redirection of streaming blood in atrial and ventricular cavities of the adult human heart, with sinuous, chirally asymmetric paths of flow through the whole. On the basis of mapped flow fields and drawings that illustrate spatial relations between flow paths, we propose that asymmetries and curvatures of the looped heart have potential fluidic and dynamic advantages. Patterns of atrial filling seem to be asymmetric in a manner that allows the momentum of inflowing streams to be redirected towards atrio-ventricular valves, and the change in direction at ventricular level is such that recoil away from ejected blood is in a direction that can enhance rather than inhibit ventriculo-atrial coupling. Chiral asymmetry might help to minimize dissipative interaction between entering, recirculating and outflowing streams. These factors might combine to allow a reciprocating, sling-like, 'morphodynamic' mode of action to come into effect when heart rate and output increase during exercise.

Adult↗

PubMed2000

Investigating intrinsic myocardial mechanics: the role of MR tagging, velocity phase mapping, and diffusion imaging.

Assessment of myocardial mechanics is an integral part of understanding and predicting heart disease. This review covers the two most common magnetic resonance (MR) methods used to measure myocardial motion: myocardial tagging and myocardial velocity mapping. Myocardial tagging has been well established in clinical research, despite its time-consuming postprocessing procedure. Myocardial velocity mapping uses the phase shifts of the spins to encode the velocity into the MR signal. This means that once the myocardial contours have been segmented, the data can be automatically processed to obtain quantitative measurements. Diffusion MR also has found applications in cardiac imaging, with preliminary results of myocardial fiber architecture being obtained recently. These three different MR techniques have provided valuable insights into the assessment of intrinsic cardiac mechanics. J. Magn. Reson. Imaging 2000;12:873-883.

Animals↗

PubMed2000

Interleaved spiral cine coronary artery velocity mapping.

Navigator-echo controlled interleaved spiral cine coronary-artery velocity maps were acquired in eight free-breathing volunteers. Good quality data were achieved in all subjects with phasic flow being clearly demonstrated. The improved efficiency of spiral k-space coverage compared to that of more conventional spin-warp techniques resulted in a mean scan time for 256 x 256 pixel-matrix studies of 94 sec (range 69 - 123 sec, SD = 20 sec), the navigator acceptance rate being typically 40-45%. Repeat scans in five subjects showed a high degree of reproducibility, with no significant differences occurring in the peak velocities (14.6+/-1.4 cm/sec vs. 14.5+/-1.5 cm/sec, P = ns) nor in the mean velocities measured over all cine phases (8.3+/-2.1 cm/sec vs. 8.7+/-1.6 cm/sec, P = ns). The potential benefits of using this sequence for assessing coronary blood flow and flow reserve are discussed. Magn Reson Med 43:787-792, 2000.

Blood Flow Velocity↗

PubMed2000

Transient streamlines: texture synthesis for in vivo flow visualisation.

Magnetic resonance (MR) imaging is a versatile technique for providing detailed information on blood vessel morphology and function. With its ability to acquire multi-dimensional cine flow data, MR is also an important tool for providing insight into blood flow patterns in vivo. The purpose of this paper is to describe the application of texture synthesis for flow visualisation. Two related issues are addressed, one is the removal of image noise from the acquired velocity data to ensure a correct representation of the underlying flow structure, and the other is the formation of transient streamlines through flow texture synthesis. The process of noise removal is achieved by using a convex projection algorithm based on the principle of mass conservation, whereas transient streamlines are formed via an iterative orientated pattern formation and enhancement procedure. The method described provides realistic visualisation of the flow patterns and avoids distortions caused by integration errors associated with conventional streamline tracking techniques. Effectiveness of the method applied to MR flow data acquired in healthy volunteers and patients is demonstrated.

Blood Flow Velocity↗

PubMed2000

[Fusion and expression of the gene encoding human Mn-SOD to anti-CEA single-chain antibody in Escherichia coli].

The gene encoding human manganese-superoxide dismutase (Mn-SOD) was fused to anti-carcinoembryonic antigen single-chain antibody gene to construct the fusion gene, then was ligated into prokaryotic expression vector pET-22b(+), The fusion gene was expressed in E. coli at high level, accounting for 24% of the total bacteria soluble protein; and was characterized by SDS-PAGE and Western-blot analysis; the expression product had the CEA-binding ability in RIA, and also had the SOD activity by pyrogallol autoxidation assay. So, the Mn-SOD moiety retains substantial enzymatic activity, where the ScFv moiety can deliver the fusion protein to tumor, Mn-SOD is a potential tumor-suppressor gene, maybe the fusion protein can provide a new pathway to tumor therapy.

Amino Acid Sequence↗

PubMed2000

[Cloning of the zot gene of Vibrio cholerae and its expression in Escherichia coli].

The zot gene encoding Zonula occludens toxin was amplified from classic Vibrio cholerae genomic DNA by PCR. The result of sequencing indicated that zot gene encodes 399 amino acid residues. The sequence of zot gene was a little bit different from that of reported including 14 nucleotides and four amino acid residues. The expression plasmid pET-ZOT was constructed by inserting zot gene into plasmid pET-28a(+) containing the T7 promoter. The expression plasmid was induced into E. coli BL21 (DE3) and expression strain BLZOT was selected. SDS-PAGE analysis revealed that the ZOT protein was expressed and accumulated up to above 15% of bacterial soluble protein after induced by IPTG. A protein of 47 kD was expressed as including body. Western blot analysis revealed that the expressed protein was ZOT.

Base Sequence↗

PubMed1999

Safety and preliminary findings with the intravascular contrast agent NC100150 injection for MR coronary angiography.

In this Phase I clinical study, a novel ultrasmall superparamagnetic iron oxide contrast agent, NC100150 Injection (Nycomed Imaging, Oslo, Norway, a part of Nycomed Amersham), was used in two-dimensional magnetic resonance coronary angiography (MRCA). Safety and imaging data were acquired from 18 healthy male volunteers at both 0.5 and 1.5 T, before and after the administration of NC100150 Injection. Through-plane and in-plane images of the right coronary artery were analyzed. The postcontrast imaging sequences used prepulses and a high flip angle, to introduce T1 weighting. At 1.5 T (TE 2.6 msec), the through-plane coronary artery signal-to-noise ratio (SNR) (P = 0.04), coronary artery-to-fat signal difference-to-noise ratio (SDNR) (P = 0.001), coronary artery-to-myocardium SDNR (P<0.001), and coronary artery delineation (P<0.001) were improved by the administration of NC100150 Injection. For in-plane imaging, coronary artery delineation improved, but there were no significant changes in the SNR and SDNR. At 0.5 T, with the longer TE (6.7 msec) imaging sequence used, there was a reduction in the SNR (P = 0.01), the fat SDNR (through-plane P = 0.02; in-plane P = 0.25), and the coronary artery diameter (P<0.01 in both imaging planes). There was a trend toward improvement in the myocardial SDNR and coronary artery delineation. In conclusion, NC 100150 Injection was given safely to 18 healthy subjects, with no major adverse reactions. Coronary artery delineation was improved in both imaging planes at 1.5 T, with a trend toward improvement at 0.5 T. At 1.5 T, with a short TE imaging sequence, the marked T1 shortening effects of NC100150 Injection were dominant, leading to an improvement in the quantitative parameters for the through-plane images. At 0.5 T, with a longer TE imaging sequence, the T2* effects of the contrast agent played a role in reducing the quantitative image parameters. With further optimization of imaging sequences, to take advantage of the long-lived intravascular T1 shortening effect of NC100150 Injection, further improvements in MRCA will be possible.

Adult↗

PubMed1999

First-pass myocardial perfusion imaging and equilibrium signal changes using the intravascular contrast agent NC100150 injection.

In this phase I clinical study, the new ultrasmall superparamagnetic iron oxide contrast agent, NC100150 Injection (Nycomed AS, Oslo, Norway, a part of Nycomed Amersham), was assessed for first-pass magnetic resonance myocardial perfusion studies and its ability to produce equilibrium signal changes, as a possible indicator of myocardial blood volume. Data were acquired in 18 healthy male volunteers at 0.5 T and 1.5 T. At both field strengths, first-pass studies using T1-weighted sequences were acquired. Long TE spin-echo echoplanar imaging (EPI) was used at 0.5 T and short TE fast low-angle shot (FLASH) imaging at 1.5 T. With both sequences, T1 effects dominated the images for low doses, and time intensity curves potentially suitable for perfusion analysis were generated. At higher doses, T2 and T2* effects were observed. At 1.5 T, these predominantly affected the blood pool signal; however, at 0.5 T the myocardial signal was also involved, reflecting the relative T2 and T2* sensitivity of the spin-echo EPI sequence as a result of the long TE and long readout window, respectively. Equilibrium changes were assessed at both field strengths using T1-weighted FLASH sequences and in addition at 1.5 T using T2*-weighted gradient-echo EPI. With the T1-weighted images at both field strengths, signal changes were observed in all subjects; however, no dose-response relationship could be shown. With the T2*-weighted EPI there was significantly lower signal (P < 0.05) with the 3 and 4 mg/kg doses than with the 2 mg/kg dose. In conclusion, NC100150 Injection is useful for first-pass myocardial perfusion using T1-weighted sequences; however, low doses in combination with short TE sequences are required to minimize sensitivity to T2* effects. Equilibrium signal changes can also be induced in the myocardium. More work is required to optimize the imaging sequences and dose of NC100150 Injection for first-pass studies and also to determine whether the equilibrium signal changes can be used to measure myocardial blood volume changes in ischemic heart disease.

Adult↗

PubMed1999

Locally focused 3D coronary imaging using volume-selective RF excitation.

This paper describes a locally focused magnetic resonance (MR) imaging method for three-dimensional (3D) zonal echoplanar coronary angiography using volume-selective radiofrequency (RF) excitation. Spatially variable resolution was used for delineating coronary arteries and reducing the effect of residual signals caused by the imperfect excitation profile of the RF pulse. The use of variable resolution enabled the derivation of basis functions having different spatial characteristics pertaining to regional object details, and a significantly smaller number of phase-encoded signal measurements was needed for image reconstruction. Based on the relative significance of each required phase-encoding step, real-time phase-encode reordering was used to minimize the effect of respiratory motion during coronary imaging. To eliminate Nyquist ghosting in oblique echoplanar imaging, the echoplanar data acquired during forward and reverse echoes were reconstructed separately and then averaged with spatial registration for improving the signal-to-noise ratio. The technique was evaluated with phantom experiments and right coronary artery images of 11 asymptomatic volunteers using a 0.5 T MR system. A marked improvement in image quality has been achieved despite a 30% reduction in imaging time.

Artifacts↗

PubMed1999

Coronary artery imaging in a 0.5-Tesla scanner: implementation of real-time, navigator echo-controlled segmented k-space FLASH and interleaved-spiral sequences.

Coronary angiography techniques have been implemented on a 0.5-Tesla scanner with a view to performing coronary artery imaging. Slice-followed, segmented k-space FLASH sequences and interleaved-spiral sequences have been employed with acquisitions under real-time navigator echo control with patient feed back, enabling poor signal-to-noise levels to be overcome by averaging data acquired over multiple, variable-length, reproducible breath holds. Good-quality, millimetre-resolution coronary images were obtained in ten normal subjects with both techniques. The mean percent of data segments or interleaves acquired with the navigator echo within the 5-mm diaphragm acceptance window was 57% [standard deviation (S.D.), 11%; range, 38-85%], and the average image-acquisition times were 123+/-22 sec and 71+/-14 sec for segmented FLASH and interleaved-spiral imaging, respectively. In addition to shorter acquisition times, the interleaved-spiral sequence has superior temporal resolution, allowing the acquisition of limited, multislice data sets. However, the sequence is particularly sensitive to the off-resonance effects of residual epicardial fat surrounding the artery and to field nonuniformities, both of which lead to image blurring and, unlike segmented FLASH acquisitions (which are very robust), the spiral data sets generally require postprocessing.

Adult↗