Biomedical subjects

Gregory C Rutledge

Publications and source records attributed to Gregory C Rutledge.

12 recordsLinked to original sources

PubMed2006

The mechanical properties of crystalline cyclopentyl polyhedral oligomeric silsesquioxane.

The anisotropic elastic constants of crystalline octacyclopentyl polyhedral oligomeric silsesquioxane (CpPOSS) were determined using molecular dynamics. The force field used for these calculations was shown to model accurately the rhombohedral and triclinic crystal structures of octasilsesquioxane and CpPOSS, respectively, as well as the vibrational frequencies of octasilsesquioxane. The moduli for CpPOSS are anisotropic, with a Reuss-averaged bulk modulus of 7.5 GPa, an isotropic averaged Young's modulus of 11.78 GPa, and an isotropic averaged shear modulus of 4.75 GPa. These isotropic averages or, alternatively, the full anisotropic stiffness tensor of the crystal can be used with micromechanical composite models to calculate the effective elastic properties of polymer nanocomposites that contain crystalline aggregates of CpPOSS.

Journal Article↗

PubMed2006

Electrospun polymer nanofibers with internal periodic structure obtained by microphase separation of cylindrically confined block copolymers.

Continuous fibers are described having concentric layer or aligned sphere microphase-separated, styrene-isoprene block copolymer morphologies. The fibers are obtained by a two-fluid coaxial electrospinning technique in which the desired block copolymer is encapsulated as the core component within a polymer shell having a high glass transition temperature (Tg). The fibers range in diameter from 300 to 800 nm, and the block copolymer core ranges from 50 to 500 nm. Subsequent annealing of the fibers above the upper Tg of the block copolymer but below the Tg of the shell polymer results in microphase separation of the block copolymer under cylindrical confinement. The resulting fibers exhibit improved long-range order. This two-step strategy creates the opportunity to fabricate continuous nanofibers with periodic internal structure.

Journal Article↗

PubMed2005

Osmotic pressure of aqueous chondroitin sulfate solution: a molecular modeling investigation.

The osmotic pressure of chondroitin sulfate (CS) solution in contact with an aqueous 1:1 salt reservoir of fixed ionic strength is studied using a recently developed coarse-grained molecular model. The effects of sulfation type (4- vs. 6-sulfation), sulfation pattern (statistical distribution of sulfate groups along a chain), ionic strength, CS intrinsic stiffness, and steric interactions on CS osmotic pressure are investigated. At physiological ionic strength (0.15 M NaCl), the sulfation type and pattern, as measured by a standard statistical description of copolymerization, are found to have a negligible influence on CS osmotic pressure, which depends principally on the mean volumetric fixed charge density. The intrinsic backbone stiffness characteristic of polysaccharides such as CS, however, is demonstrated to contribute significantly to its osmotic pressure behavior, which is similar to that of a solution of charged rods for the 20-disaccharide chains considered. Steric excluded volume is found to play a negligible role in determining CS osmotic pressure at physiological ionic strength due to the dominance of repulsive intermolecular electrostatic interactions that maintain chains maximally spaced in that regime, whereas at high ionic-strength steric interactions become dominant due to electrostatic screening. Osmotic pressure predictions are compared to experimental data and to well-established theoretical models including the Donnan theory and the Poisson-Boltzmann cylindrical cell model.

Chondroitin Sulfates↗

PubMed2005

Topological coarse graining of polymer chains using wavelet-accelerated Monte Carlo. I. Freely jointed chains.

We introduce a new, topologically-based method for coarse-graining polymer chains. Based on the wavelet transform, a multiresolution data analysis technique, this method assigns a cluster of particles to a coarse-grained bead located at the center of mass of the cluster, thereby reducing the complexity of the problem by dividing the simulation into several stages, each with a fraction of the number of beads as the overall chain. At each stage, we compute the distributions of coarse-grained internal coordinates as well as potential functions required for subsequent simulation stages. In this paper, we present the basic algorithm, and apply it to freely jointed chains; the companion paper describes its applications to self-avoiding chains.

Journal Article↗

PubMed2005

Topological coarse graining of polymer chains using wavelet-accelerated Monte Carlo. II. Self-avoiding chains.

In the preceding paper [A. E. Ismail, G. C. Rutledge, and G. Stephanopoulos J. Chem. Phys. (in press)] we introduced wavelet-accelerated Monte Carlo (WAMC), a coarse-graining methodology based on the wavelet transform, as a method for sampling polymer chains. In the present paper, we extend our analysis to consider excluded-volume effects by studying self-avoiding chains. We provide evidence that the coarse-grained potentials developed using the WAMC method obey phenomenological scaling laws, and use simple physical arguments for freely jointed chains to motivate these laws. We show that coarse-grained self-avoiding random walks can reproduce results obtained from simulations of the original, more-detailed chains to a high degree of accuracy, in orders of magnitude less time.

Journal Article↗

PubMed2005

Electrospun poly(styrene-block-dimethylsiloxane) block copolymer fibers exhibiting superhydrophobicity.

Block copolymer poly(styrene-b-dimethylsiloxane) fibers with submicrometer diameters in the range 150-400 nm were produced by electrospinning from solution in tetrahydrofuran and dimethylformamide. Contact angle measurements indicate that the nonwoven fibrous mats are superhydrophobic, with a contact angle of 163 degrees and contact angle hysteresis of 15 degrees . The superhydrophobicity is attributed to the combined effects of surface enrichment in siloxane as revealed by X-ray photoelectron spectroscopy and surface roughness of the electrospun mat itself. Additionally, the fibers are shown by transmission electron microscopy to exhibit microphase-separated internal structures. Calorimetric studies confirm the strong segregation between the polystyrene and poly(dimethylsiloxane) blocks.

Journal Article↗

PubMed2005

A coarse-grained molecular model for glycosaminoglycans: application to chondroitin, chondroitin sulfate, and hyaluronic acid.

A coarse-grained molecular model is presented for the study of the equilibrium conformation and titration behavior of chondroitin (CH), chondroitin sulfate (CS), and hyaluronic acid (HA)-glycosaminoglycans (GAGs) that play a central role in determining the structure and biomechanical properties of the extracellular matrix of articular cartilage. Systematic coarse-graining from an all-atom description of the disaccharide building blocks retains the polyelectrolytes' specific chemical properties while enabling the simulation of high molecular weight chains that are inaccessible to all-atom representations. Results are presented for the characteristic ratio, the ionic strength-dependent persistence length, the pH-dependent expansion factor for the end-to-end distance, and the titration behavior of the GAGs. Although 4-sulfation of the N-acetyl-D-galactosamine residue is found to increase significantly the intrinsic stiffness of CH with respect to 6-sulfation, only small differences in the titration behavior of the two sulfated forms of CH are found. Persistence length expressions are presented for each type of GAG using a macroscopic (wormlike chain-based) and a microscopic (bond vector correlation-based) definition. Model predictions agree quantitatively with experimental conformation and titration measurements, which support use of the model in the investigation of equilibrium solution properties of GAGs.

Biophysical Phenomena↗

PubMed2004

Characterization of polyethylene crystallization from an oriented melt by molecular dynamics simulation.

Molecular dynamics is used to characterize the process of crystallization for a united atom model of polyethylene. An oriented melt is produced by uniaxial deformation under constant load, followed by quenching below the melting temperature at zero load. The development of crystallinity is monitored simultaneously using molecular-based order parameters for density, energy, and orientation. For crystallization temperatures ranging from 325 to 375 K, these simulations clearly show the hallmarks of crystal nucleation and growth. We can identify multiple nucleation events, lamellar growth up to the limit imposed by periodic boundaries of the simulation cell, and lamellar thickening. We observe a competition between the rate of nucleation, which results in multiple crystallites, the rate of chain extension, which results in thicker lamellae, and the rate of chain conformational relaxation, which is manifested in lower degrees of residual order in the noncrystalline portion of the simulation. The temperature dependence of lamellar thickness is in accord with experimental data. At the higher temperatures, tilted chain lamellae are observed to form with lamellar interfaces corresponding approximately to the [201] facet, indicative of the influence of interfacial energy.

Journal Article↗

PubMed2003

Controlling the fiber diameter during electrospinning.

We present a simple analytical model for the forces that determine jet diameter during electrospinning as a function of surface tension, flow rate, and electric current in the jet. The model predicts the existence of a terminal jet diameter, beyond which further thinning of the jet due to growth of the whipping instability does not occur. Experimental data for various electrospun fibers attest to the accuracy of the model.

Journal Article↗

PubMed2003

Inverse Monte Carlo procedure for conformation determination of macromolecules.

A novel numerical method for determining the conformational structure of macromolecules is applied to idealized biomacromolecules in solution. The method computes effective inter-residue interaction potentials solely from the corresponding radial distribution functions, such as would be obtained from experimental data. The interaction potentials generate conformational ensembles that reproduce thermodynamic properties of the macromolecule (mean energy and heat capacity) in addition to the target radial distribution functions. As an evaluation of its utility in structure determination, we apply the method to a homopolymer and a heteropolymer model of a three-helix bundle protein [Zhou, Y.; Karplus, M. Proc Natl Acad Sci USA 1997, 94, 14429; Zhou, Y. et al. J Chem Phys 1997, 107, 10691] at various thermodynamic state points, including the ordered globule, disordered globule, and random coil states.

Journal Article↗

PubMed2002

Enhanced mobility accompanies the active deformation of a glassy amorphous polymer.

Molecular dynamics simulation is used to reveal the origin of increased molecular mobility that accompanies plastic deformation of a glassy amorphous polymer under an applied stress. Significant increases in torsional transition rates are observed during active deformation prior to and just beyond the yield point. The transition rate drops when active deformation ceases. Increased transition rates are not contingent upon dilation. These simulations verify recent experimental observations of increased mobility during active deformation.

Journal Article↗

PubMedDate not supplied

Electrospinning Bombyx mori silk with poly(ethylene oxide).

Electrospinning for the formation of nanoscale diameter fibers has been explored for high-performance filters and biomaterial scaffolds for vascular grafts or wound dressings. Fibers with nanoscale diameters provide benefits due to high surface area. In the present study we explore electrospinning for protein-based biomaterials to fabricate scaffolds and membranes from regenerated silkworm silk, Bombyx mori, solutions. To improve processability of the protein solution, poly(ethylene oxide) (PEO) with molecular weight of 900,000 was blended with the silk fibroin. A variety of compositions of the silk/PEO aqueous blends were successfully electrospun. The morphology of the fibers was characterized using high-resolution scanning electron microscopy. Fiber diameters were uniform and less than 800 nm. The composition was estimated by X-ray photoelectron spectroscopy to characterize silk/PEO surface content. Aqueous-based electrospining of silk and silk/PEO blends provides potentially useful options for the fabrication of biomaterial scaffolds based on this unique fibrous protein.

Animals↗