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Biomedical subjects

Hae-Young Kim

Publications and source records attributed to Hae-Young Kim.

3 recordsLinked to original sources

Multilevel analysis of group-randomized trials with binary outcomes.

OBJECTIVES: Many dental studies have assessed the effectiveness of community- or group-based interventions such as community water fluoridation. These cluster trials, of which group-randomized trials (GRTs) are one type, have design and analysis considerations not found in studies with randomization of treatments to individuals (randomized controlled trials, RCTs). The purpose of this paper is to review analytic methods used for the analysis of binary outcomes from cluster trials and to illustrate these concepts and analytical methods using a school-based GRT. METHODS: We examine characteristics of GRTs including intra-class correlation (ICC), their most distinctive feature, and review analytical methods for GRTs including group-level analysis, adjusted chi-square test and multivariable analysis (mixed effect models and generalized estimating equations) for correlated binary data. We consider two- and three-level modeling of data from a cross-sectional cluster design. We apply the concepts reviewed using a GRT designed to determine the effect of incentives on response rates in a school-based dental study. We compare the results of analyses using methods for correlated binary data with those from traditional methods that do not account for ICC. RESULTS: Application of traditional analytic methods to the dental GRT used as an example for this paper led to a substantial overstatement of the effectiveness of the intervention. CONCLUSIONS: Ignoring the ICC among members of the same group in the analysis of public health intervention studies can lead to erroneous conclusions where groups are the unit of assignment. Special consideration is needed in the analysis of data from these cluster trials. Randomization of treatments to groups also should receive more consideration in the design of cluster trials in dental public health.

Algorithms↗

Sample-size calculations for studies with correlated ordinal outcomes.

Correlated ordinal response data often arise in public health studies. Sample-size (power) calculations are a crucial step in designing such studies to ensure an adequate sample to detect a significant effect. Here we extend Rochon's method of sample-size estimation with a repeated binary response to the ordinal case. The proposed sample-size calculations are based on an analysis with generalized estimating equations (GEE) and inference with the Wald test. Simulation results demonstrate the merit of the proposed power calculations. Analysis of an arthritis clinical trial is used for illustration.

Antirheumatic Agents↗

Production of tagatose by a recombinant thermostable L-arabinose isomerase from Thermus sp. IM6501.

A gene (thaI) corresponding to L-arabinose isomerase from Thermus strain IM6501 was cloned by PCR. It comprised 1488 nucleotides and encoded a polypeptide of 496 residues with a predicted molecular weight of 56019 Da. The deduced amino acid sequence had 96.8% identity with the L-arabinose isomerase of Geobacillus stearothermophilus. Recombinant ThaI with N-terminal hexa-tistidine tags was over-expressed in Escherichia coli and purified by affinity chromatography using Ni-NTA resin. The purified ThaI was thermostable with maximal activity at 60 degrees C at pH 8 for 30 min of reaction. Zn2+ and Ni2+ inactivated the catalytic activity of ThaI, 5 mM Mn2+ enhanced the bioconversion yield by 90%. The bioconversion yield of 54% from D-galactose to D-tagatose was obtained by recombinant ThaI at 60 degrees C over 3 d.

Aldose-Ketose Isomerases↗