Biomedical subjects

Haim Azhari

Publications and source records attributed to Haim Azhari.

11 recordsLinked to original sources

PubMed2006

Measurement of speed of sound dispersion in soft tissues using a double frequency continuous wave method.

We introduce a method for measuring the speed of sound dispersion. It combines a short pulse transmission followed by a long burst comprised of two frequencies, one being double that of the other. The method allows the determination of the speed of sound dispersion using a single transmission. To validate the method, the dispersion was first measured in plastic samples and then in in vitro soft tissues samples. The results obtained for Perspex samples are in excellent agreement with values reported in the literature. The dispersion index in soft tissues ranged for a bovine heart from 0.63 +/- 0.24 (m/s.MHz) at 1.5 MHz to 0.27 +/- 0.05 (m/s.MHz) at 4.5 MHz and for a turkey breast from 1.3 +/- 0.28 (m/s.MHz) at 1.75 MHz to 0.73 +/- 0.1 (m/s.MHz) at 3.8 MHz. The significant difference in the speed of sound dispersion index between the studied materials indicates that dispersion may be used as a new index for soft tissue characterization by ultrasound.

Animals↗

PubMed2006

Super-resolution in PET imaging.

This paper demonstrates a super-resolution method for improving the resolution in clinical positron emission tomography (PET) scanners. Super-resolution images were obtained by combining four data sets with spatial shifts between consecutive acquisitions and applying an iterative algorithm. Super-resolution attenuation corrected PET scans of a phantom were obtained using the two-dimensional and three-dimensional (3-D) acquisition modes of a clinical PET/computed tomography (CT) scanner (Discovery LS, GEMS). In a patient study, following a standard 18F-FDG PET/CT scan, a super-resolution scan around one small lesion was performed using axial shifts without increasing the patient radiation exposure. In the phantom study, smaller features (3 mm) could be resolved axially with the super-resolution method than without (6 mm). The super-resolution images had better resolution than the original images and provided higher contrast ratios in coronal images and in 3-D acquisition transaxial images. The coronal super-resolution images had superior resolution and contrast ratios compared to images reconstructed by merely interleaving the data to the proper axial location. In the patient study, super-resolution reconstructions displayed a more localized 18F-FDG uptake. A new approach for improving the resolution of PET images using a super-resolution method has been developed and experimentally confirmed, employing a clinical scanner. The improvement in axial resolution requires no changes in hardware.

Algorithms↗

PubMed2005

Assessment of multiple sclerosis lesions with spherical harmonics: comparison of MR imaging and pathologic findings.

Spherical harmonics (SH) were used to approximate the volume and three-dimensional geometry of multiple sclerosis (MS) lesions in deceased patients. The institutional ethical committee does not require its approval for studies involving pathologic specimens. Pathologic findings were used as the reference standard. In addition, lesion volume was measured with cylindrical approximation (CA). Volumetric comparisons of biases were based on summary statistics, Spearman correlation, Wilcoxon test, and two-way analysis of variance. Shape comparison metrics included mean distance and Dice similarity coefficient (DSC). Eight of 11 lesions had smaller biases with SH method (P < .001). Median biases with SH and CA did not differ significantly, as compared with pathologic findings (r = 1.00 vs 0.99, respectively). Variances of the biases were significantly smaller for SH (P = .04). Ranges of normalized distance and DSC were 0.1%-2.5% and 75%-96%, respectively. Mean DSC was significantly higher than 70% (P < .001). SH method provided unbiased lesion volume and added geometric information that may enable a better understanding of the pathogenesis and lesion evolution over time.

Brain↗

PubMed2004

Method for rapid MRI needle tracking.

A new method for MRI needle tracking within a given two-dimensional (2D) image slice is presented. The method is based on k-space investigation of the difference image between the current dynamic frame and a reference frame. Using only a few central k-lines of the difference image and a nonlinear optimization procedure, one can resolve the parameters that define the 2D sinc function that best characterizes the needle in k-space. The spatial location and orientation of the needle are determined from these parameters. Rapid needle tracking is obtained by repeated acquisitions of the same set of several central k-lines (as in a "keyhole" protocol) and repeated computation of these parameters. The calculated needle tip is depicted on the reference image by means of a graphic overlay. The procedure was tested in computer simulations and in actual MRI scans (the computations were done offline). It was demonstrated that six k-lines out of 128 usually suffice to locate the needle. The refresh rate of the needle location depends on the time required to sample the subset of k-lines, calculate the current needle location, and refresh the reference image.

Brain↗

PubMed2004

Gradient field switching as a source for artifacts in MR imaging of metallic stents.

Metallic implants, such as stents, have long been a concern in magnetic resonance imaging (MRI). In addition to safety issues, they are commonly associated with image artifacts. The mechanisms of radiofrequency- (RF) and susceptibility-induced artifacts have been thoroughly investigated. However, gradient-switching-induced artifacts have not been analyzed. In this study it was demonstrated that gradient switching may be a source of artifacts in metallic stent MR imaging. These artifacts differ from those caused by the RF pulse. A theoretical explanation is provided as well.

Alloys↗

PubMed2004

Application of spherical harmonics derived space rotation invariant indices to the analysis of multiple sclerosis lesions' geometry by MRI.

In the longitudinal study of multiple sclerosis (MS) lesions, varying position of the patient inside the MRI scanner is one of the major sources of assessment errors. We propose to use analytical indices that are invariant to spatial orientation to describe the lesions, rather than focus on patient repositioning or image realignment. Studies were made on simulated lesions systematically rotated, from in vitro MS lesions scanned on different days, and from in vivo MS lesions from a patient that was scanned five times the same day with short intervals of time between scans. Each of the lesions' 3D surfaces was approximated using spherical harmonics, from which indices that are invariant to space rotation were derived. From these indices, an accurate and highly reproducible volume estimate can be derived, which is superior to the common approach of 2D slice stacking. The results indicate that the suggested approach is useful in reducing part of the errors that affect the analysis of changes of MS lesions during follow-up studies. In conclusion, our proposed method circumvents the need for precise patient repositioning and can be advantageous in MRI longitudinal studies of MS patients.

Brain↗

PubMed2004

Feasibility study of ultrasonic fatty liver biopsy: texture vs. attenuation and backscatter.

The objective of this study was to compare textural to attenuation/backscatter indices of fatty liver correlated to histology to suggest the better approach for an objective noninvasive ultrasonic "biopsy". Forty-four patients with severe steatosis by histopathology were selected for this study. Ten patients had "pure" fatty liver and 34 had in addition fibrosis and/or inflammation. Ultrasonic images were acquired before needle insertion. The ROI used for biopsy was marked on the ultrasonic image and characterized by three attenuation/backscatter and 18 textural related indices. Statistical analysis was performed using logistic regression. Twenty-one healthy subjects served as control. The attenuation/backscatter indices were superior to textural indices in differentiating between the categories studied. Pure fatty livers could be reliably identified (AUC = 1, SE = 0). Among the 18 textural indices, "co-occurrences sum entropy" and "co-occurrences entropy" presented the best results. Attenuation/backscatter based indices appear to have better potential than the textural based indices.

Area Under Curve↗

PubMed2003

Three-dimensional analysis of the geometry of individual multiple sclerosis lesions: detection of shape changes over time using spherical harmonics.

PURPOSE: To suggest a quantitative method for assessing the temporal changes in the geometry of individual multiple sclerosis (MS) lesions in follow-up studies of MS patients. MATERIALS AND METHODS: Computer simulated and in vivo magnetic resonance (MR) imaged MS lesions were studied. Ten in vivo MS lesions were identified from sets of axial MR images acquired from a patient scanned consecutively for 24 times during a one-year period. Each of the lesions was segmented and its three-dimensional surface approximated using spherical harmonics (SH). From the obtained SH polynomial coefficients, indices of shape were defined, and analysis of the temporal changes in each lesion's geometry throughout the year was performed by determining the mean discrete total variation of the shape indices. RESULTS: The results demonstrate that most of the studied lesions undergo notable geometrical changes with time. These changes are not necessarily associated with similar changes in size/volume. Furthermore, it was found that indices corresponding to changes in lesion shape could be 1.4 to 8.0 times higher than those corresponding to changes in the lesion size/volume. CONCLUSION: Quantitative three-dimensional shape analysis can serve as a new tool for monitoring MS lesion activity and study patterns of MS lesion evolution over time.

Adult↗

PubMed2003

Implementation of helical computed tomography in magnetic resonance imaging.

PURPOSE: To provide a rapid sequence for volumetric imaging of large fields of view. MATERIALS AND METHODS: The volumetric imaging principles of x-ray helical computed tomograpy (CT) were implemented here on an MRI scanner. However, using the advantages offered by MRI, spiral trajectories in K-space were incorporated to make the helical scan more efficient. Thus, data acquisition and interpolations were conducted in K-space and images reconstructed by gridding and applying the inverse Fourier transform. The rapid spiral helical (RASH) imaging method was evaluated by computer simulations, by scanning phantoms and an in vitro heart, and by comparison to conventional multislice interleaved spirals (MSIS) imaging. RESULTS: A significant time saving (61.4% to 85.9%) relative to MSIS was achieved without significant degradation in image quality. Volume assessment and in-plane resolution by RASH were almost identical to the MSIS pulse sequence. The corresponding increase in effective slice width was estimated to range (for the values studied here) from 1.31 to 2.5 according to the selection of the helical pitch and the slice thickness used for imaging. CONCLUSION: The suggested method offers the advantages provided by x-ray helical CT and can be useful in MRI volumetric scanning of large objects.

Animals↗

PubMed2003

Rapid MR imaging by sensitivity profile indexing and deconvolution reconstruction (SPID).

A new parallel MR imaging technique, which uses localized information from the elements of a multi-coil array to accelerate imaging, is described. The technique offers an alternative reconstruction approach to currently available techniques (e.g., SMASH and SENSE). Following a partial k-space data acquisition, image reconstruction in this approach proceeds in two steps: first, fitting the measured coil sensitivities to a set of partially localized target functions, a blurred intermediate image of the studied object is produced. Blurring is obtained in a systematic manner, forming images of the studied object convolved with a known convolution kernel. Full spatial resolution is then recovered by deconvolution of the blurred images with the known kernel function. The technique offers flexibility in the arrangement of the acquired signal data k-lines, and a mechanism for controlling reconstruction quality through the convolution the deconvolution procedure. The technique was validated in phantom and in vivo imaging experiments demonstrating high time reduction factors.

Brain↗

PubMed2002

Reconstruction in diffraction ultrasound tomography using nonuniform FFT.

We show an iterative reconstruction framework for diffraction ultrasound tomography. The use of broad-band illumination allows significant reduction of the number of projections compared to straight ray tomography. The proposed algorithm makes use of forward nonuniform fast Fourier transform (NUFFT) for iterative Fourier inversion. Incorporation of total variation regularization allows the reduction of noise and Gibbs phenomena while preserving the edges. The complexity of the NUFFT-based reconstruction is comparable to the frequency-domain interpolation (gridding) algorithm, whereas the reconstruction accuracy (in sense of the L2 and the L(infinity) norm) is better.

Algorithms↗