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Biomedical subjects

Hans Maassen

Publications and source records attributed to Hans Maassen.

2 recordsLinked to original sources

Quantitative imaging through a spectrograph. 1. Principles and theory.

Laser-based optical diagnostics, such as planar laser-induced fluorescence and, especially, Raman imaging, often require selective spectral filtering. We advocate the use of an imaging spectrograph with a broad entrance slit as a spectral filter for two-dimensional imaging. A spectrograph in this mode of operation produces output that is a convolution of the spatial and spectral information that is present in the incident light. We describe an analytical deconvolution procedure, based on Bayesian statistics, that retrieves the spatial information while it avoids excessive noise blowup. The method permits direct imaging through a spectrograph, even under broadband illumination. We introduce the formalism and discuss the underlying assumptions. The performance of the procedure is demonstrated on an artificial but pathological example. In a companion paper [Appl. Opt. 43, 5682-5690 (2004)] the method is applied to the practical case of fuel equivalence ratio Raman imaging in a combustible methane-air mixture.

Journal Article↗

Quantitative evaluation of experimental NMR restraints.

Nuclear Overhauser effect (NOE) data are an indispensable source of structural information in biomolecular structure determination by NMR spectroscopy. The number and type of experimental restraints used in the structure calculation and the RMS deviation of the restraints are usually reported. We present a new method for quantifying the information contained in the experimental NMR restraints. The method is based on a description of the structure in distance space and concepts derived from information theory. It allows for an objective description of the amount of available experimental information, which we show to be related to the positional uncertainty of the NMR ensemble. The measure of information presented is not affected by redundancy in the experimental restraints. Using various examples, we show that the method successfully identifies the crucial restraints in a structure determination: those restraints that are both important and unique. Finally, we demonstrate that the method can detect a wider range of redundancy in experimental datasets when compared to currently available methods. Because our method describes the quantitative evaluation of experimental NMR restraints, we propose the acronym QUEEN.

Amino Acid Sequence↗