Variable-temperature measurements of the single-molecule conductance of double-stranded DNA.
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Biomedical subjects
Publications and source records attributed to Harm van Zalinge.
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The temperature dependence of the single molecule conductance (SMC) of alpha,omega-alkanedithiols has been investigated using a scanning tunnelling microscopy (STM) method. This is based on trapping molecules between a gold STM tip and a gold substrate and measuring directly the current across the molecule under different applied potentials. A pronounced temperature dependence of the conductance, which scales logarithmically with T(1), is observed in the temperature range between 293 and 353 K. It is proposed the origin of this dependence is the change in distribution between molecular conformers rather than changes in either the conduction mechanism or the electronic structure of molecule. For alkanedithiols the time averaged conformer distribution shifts to less elongated conformers at higher temperatures thus giving rise to higher conductance across the molecular bridges. This is analysed by first calculating energy differences between different conformers and then calculating their partition distribution. A simple tunnelling model is then used to calculate the temperature dependent conductance based on the conformer distribution. These findings demonstrate that charge transport through single organic molecules at ambient temperatures is a subtle and highly dynamic process that cannot be described by analysing only one molecular conformation corresponding to the lowest energy geometry of the molecule.
The adsorption behavior of viologen alpha,omega-dithiols (viologen dithiols) on gold has been investigated. At short exposures, a low-coverage phase consisting of flat-lying molecules has been determined by STM and IR spectroscopy. In contrast, multilayer films are formed after long adsorption times. Single molecular wires could be formed between a gold STM tip and a surface with a low coverage of the adsorbed dithiols, and their electrical behavior was investigated. Molecular conductivity was determined either by the repeated measurement of I(s) curves or by recording I-V curves for different tip-sample separations. These methods concurred in producing a value of (0.5 +/- 0.1) nS for the single-molecule conductivity of the alpha,omega-viologen dithiol molecule HS-6V6-SH. The high conductivity of HS-6V6-SH, as compared to that of HS-C12-SH, may be related to the low-lying LUMO, which provides a barrier indentation for electron transport in a two-step electron-transfer mechanism.
Spontaneous formation of stable molecular wires between a gold scanning tunneling microscopy (STM) tip and substrate is observed when the sample has a low coverage of alpha,omega-dithiol molecules and the tunneling resistance is made sufficiently small. Current-distance curves taken under these conditions exhibit characteristic current plateaux at large tip-substrate separations from which the conductivity of a single molecule can be obtained. The versatility of this technique is demonstrated using redox-active molecules under potential control, where substantial reversible conductivity changes from 0.5 to 2.8 nS were observed when the molecule was electrochemically switched from the oxidized to the reduced state.