Biomedical subjects

Harry Adams

Publications and source records attributed to Harry Adams.

At least 37 records · Page 2Linked to original sources

PubMed2005

Dichlorotetrakis[3-(4-pyridyl)-1H-pyrazole]cobalt(II) acetonitrile tetrasolvate: an infinite hydrogen-bonded network, in an instant.

Reaction of 3-(4-pyridyl)pyrazole (4pypz) with cobalt(II) chloride in acetonitrile affords the title complex, [CoCl(2)(C(8)H(7)N(3))(4)].4CH(3)CN, within seconds of addition, as purple X-ray quality crystals. The molecule has C4 symmetry. The metal ion exhibits a trans-N(4)Cl(2) octahedral geometry, with the four 3-(4-pyridyl)-1H-pyrazole ligands coordinating through their pyridyl N-atom donors; one coordinated chloride ion forms hydrogen bonds with the pyrazole rings from four separate units. This configuration creates an infinite three-dimensional coordination network containing channels that are filled with acetonitrile solvent molecules.

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PubMed2005

New members of the [Ru(diimine)(CN)(4)](2-) family: structural, electrochemical and photophysical properties.

A series of complexes of the type K(2)[Ru(NN)(CN)(4)] has been prepared, in which NN is a diimine ligand, and were investigated for both their structural and photophysical properties. The ligands used (and the abbreviations for the resulting complexes) are 3-(2-pyridyl)pyrazole (Ru-pypz), 2,2'-bipyrimidine (Ru-bpym), 5,5'-dimethyl-2,2'-bipyridine (Ru-dmb), 1-ethyl-2-(2-pyridyl)benzimidazole (Ru-pbe), bidentate 2,2':6',2'''-terpyridine (Ru-tpy). The known complexes with = 2,2'-bipyridine (Ru-bpy) and 1,10-phenathroline (Ru-phen) were also included in this work. A series of crystallographic studies showed that the [Ru(NN)(CN)(4)](2-) complex anions form a range of elaborate coordination networks when crystallised with either K(+) or Ln(3+) cations. The K(+) salts are characterised by a combination of near-linear Ru-CN-K bridges, with the cyanides coordinating to K(+) in the usual 'end-on' mode, and unusual side-on pi-type coordination of cyanide ligands to K(+) ions. With Ln(3+) cations in contrast only Ru-CN-Ln near-linear bridges occurred, affording 1-dimensional helical or diamondoid chains, and 2-dimensional sheets constituted from linked metallamacrocyclic rings. All of the K(2)[Ru(CN)(4)] complexes show a reversible Ru(II)/Ru(III) couple (ca.+0.9 V vs. Ag/AgCl in water), the exception being Ru-tpy whose oxidation is completely irreversible. Luminescence studies in water showed the presence of (3)MLCT-based emission in all cases apart from Ru-bpym with lifetimes of tens/hundreds of nanoseconds. Time-resolved infrared studies showed that in the (3)MLCT excited state the principal C-N stretching vibration shifts to positive energy by ca. 50 cm(-1) as a consequence of the transient oxidation of the metal centre to Ru(III) and the reduction in back-bonding to the cyanide ligands; measurement of transient decay rates allowed measurements of (3)MLCT lifetimes for those complexes which could not be characterised by luminescence spectroscopy. A few complexes were also examined in different solvents (MeCN, dmf) and showed much weaker emission and shorter excited-state lifetimes in these solvents compared to water.

Journal Article↗

PubMed2005

Photophysical properties of Pr(III) and Er(III) complexes of poly(pyrazolyl)borates.

The complexes [M(L(1))(2)(NO(3))] and [M(L(2))(NO(3))(2)](M = Pr, Er; L(1)= the tetradentate ligand dihydrobis-[3-(2-pyridyl)pyrazolyl]borate; L(2)= the hexadentate ligand hydrotris-[3-(2-pyridyl)pyrazolyl]borate) were prepared and their structural and photophysical properties studied. All complexes are 10-coordinate. Crystallographic analysis of [M(L(1))(2)(NO(3))](M = Pr, Er) showed that for the smaller Er(iii) ions steric congestion at the metal centre results in two of the Er-N(pyridyl) distances being particularly long, which does not occur with the larger Pr(iii) ion that is better able to accommodate 10-fold coordination. On UV irradiation, both Pr(iii) complexes show, in the visible region of their luminescence spectra, transitions originating from both the (3)P(0) level (at ca. 21,000 cm(-1)) and the (1)D(2) level (at ca. 17,000 cm(-1)), a consequence of the fact that the lowest triplet state of the coordinated pyrazolylborate ligands lies at ca. 24,000 cm(-1) in each case so is high enough in energy to populate both levels. This contrasts with Pr(iii) complexes based on diketonate ligands in which the lower triplet energies of the ligands result in emission from the (1)D(2) level only. At longer wavelengths, near-infrared luminescence arising from the (1)D(2) emissive level is observed with lifetimes (in both the solid state and solution) being in the range 50-110 ns. For both Er(iii) complexes, luminescence at 1530 nm occurs following UV excitation of ligand-centred transitions. In CH(2)Cl(2) both complexes gave dual-exponential luminescence, with the major component having a lifetime characteristic of an intact Er(iii) complex (approximately 1.5 micros) and the minor component being much shorter lived (0.2-0.5 micros), suggestive of a species in which a ligand is partially detached and the metal is solvated, with the two forms interconverting slowly. This behaviour is consistent with the steric congestion and long M-N(pyridyl) bonds that were observed in [Er(L(1))(2)(NO(3))]. In the solid state both Er(iii) complexes gave very weak luminescence, which could be fitted to a single exponential decay with a lifetime similar to the longer-lived of the solution components.

Journal Article↗

PubMed2005

Structural and photophysical properties of coordination networks combining [Ru(bipy)(CN)4]2- anions and lanthanide(III) cations: rates of photoinduced Ru-to-lanthanide energy transfer and sensitized near-infrared luminescence.

Co-crystallization of K2[Ru(bipy)(CN)4] with lanthanide(III) salts (Ln = Pr, Nd, Gd, Er, Yb) from aqueous solution affords coordination oligomers and networks in which the [Ru(bipy)(CN)4]2- unit is connected to the lanthanide cation via Ru-CN-Ln bridges. The complexes fall into two structural types: [{Ru(bipy)(CN)4}2{Ln(H2O)m}{K(H2O)n}] x xH2O (Ln = Pr, Er, Yb; m = 7, 6, 6, respectively), in which two [Ru(bipy)(CN)4]2- units are connected to a single lanthanide ion by single cyanide bridges to give discrete trinuclear fragments, and [{Ru(bipy)(CN)4}3{Ln(H2O)4}2] x xH2O (Ln = Nd, Gd), which contain two-dimensional sheets of interconnected, cyanide-bridged Ru2Ln2 squares. In the Ru-Gd system, the [Ru(bipy)(CN)4]2- unit shows the characteristic intense (3)metal-to-ligand charge transfer luminescence at 580 nm with tau = 550 ns; with the other lanthanides, the intensity and lifetime of this luminescence are diminished because of a Ru --> Ln photoinduced energy transfer to low-lying emissive states of the lanthanide ions, resulting in sensitized near-infrared luminescence in every case. From the degree of quenching of the Ru-based emission, Ru --> Ln energy-transfer rates can be estimated, which are in the order Yb (k(EnT) approximately 3 x 10(6) sec(-1), the slowest energy transfer) < Er < Pr < Nd (k(EnT) approximately 2 x 10(8) sec(-1), the fastest energy transfer). This order may be rationalized on the basis of the availability of excited f-f levels on the lanthanide ions at energies that overlap with the Ru-based emission spectrum. In every case, the lifetime of the lanthanide-based luminescence is short (tens/hundreds of nanoseconds, instead of the more usual microseconds), even when the water ligands on the lanthanide ions are replaced by D2O to eliminate the quenching effects of OH oscillators; we tentatively ascribe this quenching effect to the cyanide ligands.

Journal Article↗

PubMed2005

B-N bond cleavage by cobalt(II) in acetato(3,5-diphenylpyrazole)[tris(3,5-diphenylpyrazolyl)borato]cobalt(II).

The reaction of cobalt(II) acetate with potassium tris(pyrazolyl)borate (KTp(Ph2)) affords the title complex, [Co(Tp(Ph2))(O2CMe)(Hpz(Ph2))] (Hpz(Ph2) is 3,5-diphenylpyrazole) or [Co(C45H34BN6)(C2H3O2)(C15H12N2)], as a result of cobalt-induced B-N bond cleavage of the tris(pyrazolyl)borate ligand. The cobalt complex exhibits a distorted CoN(4)O coordination geometry with a kappa(3)-coordinated Tp(Ph2) ligand and monodentate acetate and pyrazole ligands. In addition, the non-coordinated acetate O atom is involved in a weak intramolecular hydrogen-bonding interaction with the pyrrole NH group.

Journal Article↗

PubMed2005

New bis-, tris- and tetrakis(pyrazolyl)borate ligands with 3-pyridyl and 4-pyridyl substituents: synthesis and coordination chemistry.

The new ligands dihydrobis[3-(4-pyridyl)pyrazol-1-yl]borate [Bp(4py)]-, hydrotris[3-(4-pyridyl)pyrazol-1-yl]borate [Tp(4py)]-, tetrakis[3-(4-pyridyl)pyrazol-1-yl]borate [Tkp(4py)]-, dihydrobis[3-(3-pyridyl)pyrazol-1-yl]borate [Bp(3py)]-, hydrotris[3-(3-pyridyl)pyrazol-1-yl]borate [Tp(3py)]- and tetrakis[3-(3-pyridyl)pyrazol-1-yl]borate [Tkp(4py)]- are derivatives of the well known bis-, tris- and tetrakis-(pyrazolyl)borate cores, bearing 4-pyridyl or 3-pyridyl substituents attached to the pyrazolyl C3 positions. These pyridyl groups cannot chelate to the metal ions in the poly(pyrazolyl) cavity but are externally directed. Structural studies on a range of metal complexes show how, in many cases, coordination of these pendant pyridyl groups to the M(pyrazolyl)n core of an adjacent metal complex fragment results in formation of coordination oligomers or polymeric networks. [Tl(Bp(3py))], [Tl(Bp(4py))] and [Tl(Tp(4py))] form one-dimensional polymeric chains via coordination of one of their pendant pyridyl units to the Tl(I) centre of an adjacent complex fragment; in contrast, in [Tl(Tp(3py))] coordination of all three pendant pyridyl units to separate Tl(I) neighbours results in formation of a two-dimensional polymeric sheet. In [Tl(Tkp(3py))] and [Tl(Tkp(4py))] the Tl(I) is coordinated by two or three of the four pyrazolyl arms, respectively; bridging interactions of pendant 4-pyridyl groups with adjacent Tl(I) centres result in a two-dimensional sheet forming in each case. In Ag(Tkp(4py)) each Ag(I) ion is coordinated by two pyrazolyl rings, and two bridging pyridyl ligands from other complex units, resulting in a one-dimensional chain consisting of pairs of cross-linked zigzag chains. In contrast to these polymeric coordination networks, the structures of [Cu(Tp(4py))] and [(Tp(3py))Cd(CH3CO2)] are dimers, with a pendant pyridyl residue from the first metal centre attaching to a vacant coordination site on the second, and vice versa; these dimers are stabilised by pi-stacking interactions between sections of the two ligands. [Ni(Tp(3py))2] is monomeric, with an octahedral coordination geometry arising from two tris(pyrazolyl)borate chelates; the array of pendant 3-pyridyl groups is involved only in intramolecular hydrogen-bonding. [(Tp(4py))Re(CO)3] is also monomeric, with a facial arrangement of three pyrazolyl ligands and three carbonyls, with the pendant 4-pyridyl groups not further coordinated. [(Tp(2py))Re(CO)3], based on the related ligand hydrotris[3-(2-pyridyl)pyrazol-1-yl]borate, has a similar fac-(CO)3(pyrazolyl)3 coordination geometry.

Journal Article↗

PubMed2005

The synthesis of water soluble decalin-based thiols and S-nitrosothiols--model systems for studying the reactions of nitric oxide with protein thiols.

The syntheses of three decalin-based tert-thiols displaying varying degrees of solubility in aqueous milieu are described. The S-nitroso derivatives of these compounds have also been prepared and the structures of two of these determined by single crystal X-ray diffraction. These compounds have been designed for studying the interaction of nitric oxide (NO) with thiols under physiological conditions.

Magnetic Resonance Spectroscopy↗

PubMed2005

Bis(1,3-diphenylpropane-1,3-dionato-kappa2O,O'){hydrotris[3-(2-pyridyl)pyrazol-1-yl]borato}praseodymium(III): another member of an unpredictable series.

Reaction of praseodymium(III) chloride with stoichometric quantities of dibenzoylmethane (Hdbm) and hydrotris[3-(2-pyridyl)pyrazol-1-yl]borate (Tp 2py) affords the title complex, [Pr(C24H19BN9)(C15H11O4)2]. The lanthanide ion in this ternary complex exhibits an N6O4 ten-coordinate geometry arising from the five bidentate arms found on the anionic ligands. The structure is entirely different from those found in other lanthanide complexes with the same ligand set.

Journal Article↗

PubMed2005

RuII complexes incorporating tetrathiamacrocycles: synthesis and conformational analysis.

The synthesis of a series of RuII complexes incorporating thiacrown ligands ([12]ane-S4, [14]ane-S4, [16]ane-S4), as well as 2,2'-bipyridine (bpy) or pyridine, is reported. Structural studies on these complexes have been carried out using a variety of techniques. Detailed 1H NMR spectroscopic studies on the previously reported [Ru([12]ane-S4)(bpy)]2+ (1) reveal that-contrary to earlier reports-the observed fluxional 1H NMR behavior is not due to chemical exchange involving cleavage of the bpy Ru--N bond but is, in fact, due to lone-pair inversion of coordinated macrocyclic sulfur donor atoms. This phenomenon is also observed for the [14]ane-S4 and [16]ane-S4 analogues of 1. For the first time, using a combination of X-ray crystallography, more detailed 1H NMR experiments, and computational methods, an in-depth study on the energetics and dynamics of invertomer formation and conversion for macrocyclic coordination complexes has been carried out. These studies reveal that the steric constraints of assembling each sulfur macrocycle and bpy ligand around the octahedral Ru(II) center lead to close intramolecular contacts. These contacts are largely dependent on the orientation of the electron lone pairs of equatorial sulfur donor atoms and correlate with the comparative stability of the different invertomeric forms. Thus, the conformational preferences of the three macrocyles in [Ru([n]ane-S4)(bpy)]2+ complexes are determined by steric rather than electronic effects.

Crystallography, X-Ray↗

PubMed2005

[(1R,2R)-2-Amino-1,2-diphenyl-N-(p-tolylsulfonyl)ethylamido]chloro(eta(6)-ethoxybenzene)ruthenium(II) methanol solvate.

The title compound, [Ru(C21H21N2O2S)Cl(C8H10O)].CH4O or [Ru(TsDPEN)Cl(eta6-C6H5OCH2CH3)].CH4O [where TsDPEN is (1R,2R)-1,2-diphenyl-N-(p-toluenesulfonyl)ethylenediamine], contains an S-chiral Ru centre in a distorted octahedral environment, with similar bond lengths and angles to analogous complexes. The very short (N-)H...Cl distance of 2.61 A is ascribed to an intramolecular hydrogen bond.

Journal Article↗

PubMed2005

Luminescent complexes of Re(I) and Ru(II) with appended macrocycle groups derived from 5,6-dihydroxyphenanthroline: cation and anion binding.

A range of ligands in which a macrocyclic unit is fused to a 1,10-phenanthroline unit has been prepared starting from 5,6-dihydroxyphenanthroline. The ligands are L1 in which the pendant ligand is 18-crown-6; L2, in which the pendant ligand is benzo-24-crown-8; and L(3), in which the macrocycle contains two carboxamide units. Ligands L1 and L2 can bind Group 1 and 2 metal cations in their crown-ether cavities; L3 contains two H-bond (amide) donors and is suitable for anion-binding. Luminescent complexes of the form [Ru(bipy)2L]2+, [ReL(CO)3Cl] and [RuL(CN)4]2- were prepared and some were structurally characterised; their interactions with various guest species were investigated by luminescence and NMR spectroscopy. For complexes with the crown ethers (L1 and L2), binding of K+ was rather weak, but the electrostatic effect due to the charge on the host complex was clear with [RuL1(CN)4]2- binding K+ more strongly than [Ru(bipy)2L1]2+. Binding to the pendant crown ethers was much stronger with Ba2+, and both [ReL1(CO)3Cl] and [ReL2(CO)3Cl] showed substantial luminescence quenching in MeCN on addition of Ba2+ ions, with binding constants of 4.5 x 10(4) M(-1) for [ReL1(CO)3Cl]/Ba2+ and 1.3 x 10(5) M(-1) for [ReL2(CO)3Cl]/Ba2+. Complexes [Ru(bipy)2L3]2+ and [ReL3(CO)3Cl], due to their H-bond donor sites, showed binding of dihydrogenphosphate to the macrocycle. Whereas [ReL3(CO)3Cl] showed 1 : 1 binding with (H2PO4)- in dmso with a binding constant of 65 M(-1), [Ru(bipy)2L3]2+ showed 1 : 2 binding, with microscopic association constants of ca. 1 x 10(6) and 1.6 x 10(6) M(-1) in MeCN. The fact that K2 > K1 suggests a cooperative interaction whereby binding of the first anion makes binding of the second one easier to an extent which overcomes electrostatic effects, and a model for this is proposed which also accounts for the substantial increase in luminescence from [Ru(bipy)2L3]2+ (5-fold enhancement) when the second (H2PO4)- anion binds. Both [Ru(bipy)2L3]2+ and [ReL3(CO)3Cl] undergo complete luminescence quenching and a change in colour to near-black in the presence of (anhydrous) fluoride in MeCN, probably due to deprotonation of the carboxamide group. These changes are however irreversible on a long timescale and lead to slow decomposition.

Journal Article↗

PubMed2004

A convenient synthetic route to half-sandwich rhodium(III) complexes of the tripodal ligand tris(3,5-dimethylpyrazolyl)methane.

The synthesis of the complex [RhCl3tpm*], (1), (tpm*= tris(3,5-dimethylpyrazolyl)methane) is reported. This complex is a suitable starting material for the synthesis of heteroleptic half-sandwich complexes: it has been used to synthesise the complexes; [RhCl(bpy)tpm*][(PF6)2][2][(PF6)2](bpy = 2,2'-bipyridyl), [RhCl(phen)tpm*][(PF6)2][3][(PF6)2]. (phen = 1,10-phenanthroline), [RhCl2(py)tpm*][(PF6)], [4][(PF6)2], (py = pyridine), and[RhCl(py)2tpm*][(PF6)2], [5][(PF6)2]. The structures of [2][(PF6)2], [33][(PF6)2], [4][(PF6)2], and [5][(PF6)2] have been determined by X-ray crystallography. The electrochemical and photophysical properties of these new compounds have also been investigated.

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PubMed2004

DNA binding of an organic dppz-based intercalator.

An improved synthesis of a water-soluble derivative of dipyrido[3,2-a:2',3'-c]phenazine (dppz) is reported. The structures of both dppz and the cation ethylene-bipyridyldiylium-phenazine dinitrate [[1][(PF(6))(2)]] have been obtained via X-ray crystallography. Metal complex derivatives of dppz are very well studied. However, using the water soluble [1][(NO(3))(2)], the nature of the interaction of a simple dppz unit with duplex DNA has been investigated for the first time. In both organic solvents and water, 1 displays unstructured luminescence, assigned to an intramolecular charge transfer. The emission is quenched on binding to natural and synthetic duplex DNA, including poly(dA).poly(dT). A variety of techniques reveal that the cation binds to DNA with an affinity comparable to those of many metal dppz complexes, via an intercalative binding mode.

Binding Sites↗

PubMed2004

Switchable electron-transfer processes in a mixed-valence, kinetically locked, trinuclear Ru(II) metallamacrocycle.

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Journal Article↗

PubMed2004

Experimental measurement of noncovalent interactions between halogens and aromatic rings.

Chemical double mutant cycles have been used to quantify the interactions of halogens with the faces of aromatic rings in chloroform. The halogens are forced over the face of an aromatic ring by an array of hydrogen-bonding interactions that lock the complexes in a single, well-defined conformation. These interactions can also be engineered into the crystal structures of simpler model compounds, but experiments in solution show that the halogen-aromatic interactions observed in the solid state are all unfavourable, regardless of whether the aromatic rings contain electron-withdrawing or electron-donating substituents. The halogen-aromatic interactions are repulsive by 1-3 kJ mol(-1). The interactions with fluorine are slightly less favourable than with chlorine and bromine.

Crystallography, X-Ray↗

PubMed2004

Photoinduced Ru-Yb energy transfer and sensitised near-IR luminescence in a coordination polymer containing co-crystallised [Ru(bipy)(CN)4]2- and Yb(III) units.

Co-crystallisation of the anionic cyanometallate chromophore [Ru(bipy)(CN)4]2- with Yb(III) provides coordination polymers or oligomers containing Ru-CN-Yb bridges; in [K(H2O)4][Yb(H2O)6][Ru(bipy)(CN)4]2.5H2O Ru-->Yb energy-transfer (k > 5 x 10(6) s(-1)) results in partial quenching of the Ru-based luminescence and sensitised near-IR luminescence from the Yb(III) unit.

Journal Article↗

PubMed2004

Solid-supported cross-coupling catalysts derived from homogeneous nickel and palladium coordination complexes.

Solid-supported catalysts derived from homogeneous nickel(II) and palladium(II) non-symmetrical salen-type coordination complexes have been prepared and shown to be effective in the heterogeneous catalysis of carbon-carbon cross-coupling reactions. The nickel catalyst has been used in room-temperature Tamao-Kumada-Corriu reactions and the palladium catalyst in the Heck reaction at elevated temperatures. The complexes were prepared by improved methods and characterised by spectroscopic techniques. Comparisons between the solid-supported catalysts and their homogeneous analogues are reported. The single-crystal structure determination of the nickel and palladium complexes [M(salenac-OH)][M = Ni, Pd; salenac-OH = 9-(2',4'-dihydroxyphenyl)-5,8-diaza-4-methylnona-2,4,8-trienato](2-)] is reported.

Journal Article↗

PubMed2004

Structural and near-IR photophysical studies on ternary lanthanide complexes containing poly(pyrazolyl)borate and 1,3-diketonate ligands.

The ligands tris[3-(2-pyridyl)pyrazol-1-yl]hydroborate (L1, potentially hexadentate) and bis[3-(2-pyridyl)pyrazol-1-yl]dihydroborate (L2, potentially tetradentate) have been used to prepare ternary lanthanide complexes in which the remaining ligands are dibenzoylmethane anions (dbm). [Eu(L1)(dbm)2] is eight-coordinate, with L1 acting only as a tetradentate chelate (with one potentially bidentate arm pendant) and two bidentate dbm ligands. [Nd(L1)(dbm)2] was also prepared but on recrystallization some of it rearranged to [Nd(L1)2][Nd(dbm)4], which contains a twelve-coordinate [Nd(L1)2]+ cation (two interleaved hexadentate podand ligands) and the eight-coordinate anion [Nd(dbm)4]- which, uniquely amongst eight-coordinate complexes having four diketonate ligands, has a square prismatic structure with near-perfect O8 cubic coordination. Formation of this sterically unfavourable geometry is assumed to arise from favourable packing with the pseudo-spherical cation. The isostructural series of complexes [Ln(L2)(dbm)2](Ln = Pr, Nd, Eu, Gd, Tb, Er, Yb) was also prepared and all members structurally characterised; again the metal ions are eight-coordinate, from one tetradentate ligand L2 and two bidentate dbm ligands. Photophysical studies on the complexes with Ln = Pr, Nd, Er, and Yb were carried out; all show the near-IR luminescence characteristic of these metal ions, with longer lifetimes in CD3OD than in CH3OH. For [Yb(L2)(dbm)2], two species with different luminescence lifetimes were observed in CH3OH solution, corresponding to species with zero or one coordinated solvent molecules, in slow exchange on the luminescence timescale. For [Nd(L2)(dbm)2] a single average solvation number of 0.7 was observed in MeOH. For [Pr(L2)(dbm)2] a range of emission lines in the visible and NIR regions was detected; time-resolved measurements show a particularly high susceptibility to quenching by solvent CH and OH oscillators.

Journal Article↗