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Biomedical subjects

I P Dolbnya

Publications and source records attributed to I P Dolbnya.

8 recordsLinked to original sources

The structural principles of multidomain organization of the giant polypeptide chain of the muscle titin protein: SAXS/WAXS studies during the stretching of oriented titin fibres.

Elasticity of titin is a key parameter that determines the mechanical properties of muscle. These include reversibility, i.e., the muscle's capacity to change its length many-fold and return to its original state, and the transduction of passive tension generated by the stretched muscle. The morphology and elastic properties of oriented fibres of titin molecules were studied using SAXS and WAXS (small- and wide-angle X-ray scattering, respectively) and mechanical techniques. We succeeded in obtaining oriented filaments of purified titin suitable for diffraction measurements. Our X-ray data suggest a model of titin as a nanoscale, morphological, and aperiodical array of rigid Ig- and Fn3-type domains covalently connected by conformationally variable short loops. The line group symmetry of the model can be defined as SM with axial translation tau(infinity). Both tension transduction and high elasticity of titin can be explained in terms of crystalline polymer physics. Titin stretching experiments show that each individual titin macromolecule can adopt a novel two-phase state within the fibre. Conversion between high elasticity and strength can be explained as a phase transition under external tension. In the terms of the concept of orientational melting the origin of the functional heterogeneity along the titin strand becomes interpretable.

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Observation of a hexatic columnar liquid crystal of polydisperse colloidal disks.

We report the observation of a new type of columnar liquid crystal phase, which is formed by thin hard colloidal disks in a dense suspension. High-resolution small-angle x-ray diffraction reveals a combination of long-range bond-orientational order and short-range translational order between the columns, the hallmark of the hexatic phase. Our results imply that geometric frustration related to the size polydispersity of the particles destroys long-range translational order and therefore promotes the formation of this novel phase.

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Destruction of long-range order recorded with in situ small-angle x-ray diffraction in drying colloidal crystals.

High-resolution synchrotron small-angle x-ray diffraction is applied to characterize the structure and long-range order in a sedimentary hard-sphere colloidal crystal before and during its drying. The principles of the technique and the influence of the coherence properties of the x-ray beam are discussed in detail. The capillary forces generated during the drying process are shown to destroy the long-range order and to break the crystal into smaller crystallites with slightly different orientations. The diffraction is shown to switch from the dynamic regime in the long-range-ordered crystal to nearly kinematic diffraction in the mosaic (short-range-ordered) crystal.

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Bragg rods and multiple X-ray scattering in random-stacking colloidal crystals.

Synchrotron small-angle x-ray diffraction images of random-stacking-induced Bragg scattering rods are obtained in a wide range of wave vectors from a single colloidal crystal. The results reveal a strong multiple scattering effect, which leads to new features in the diffraction pattern-secondary Bragg rods. We argue that dynamic x-ray diffraction is rather common for high-quality colloidal photonic crystals and should be taken into account.

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The phase behaviour of skin lipid mixtures based on synthetic ceramides.

The lipid lamellae present in the outermost layer of the skin, the stratum corneum (SC), form the main barrier for diffusion of molecules across the skin. The main lipid classes in SC are cholesterol (CHOL), free fatty acids (FFA) and at least nine classes of ceramides (CER), referred to as CER1 to CER9. In the present study the phase behaviour of four synthetic CER, either single or mixed with CHOL or CHOL and FFA, has been studied using small and wide angle X-ray diffraction. The lipid mixtures showed complex phase behaviour with coexistence of several phases. The results further revealed that the presence of synthetic CER1 as well as a proper composition of the other CER in the mixture were crucial for the formation of a phase with a long periodicity, characteristic for SC lipid phase behaviour. Only a mixture containing synthetic CER1 and CER3, CHOL and FFA showed similar phase behaviour to that of SC.

Ceramides↗

High-resolution small-angle x-ray diffraction study of long-range order in hard-sphere colloidal crystals.

The long-range order parameters in single crystals of hard colloidal spheres grown in sediments of colloid-polymer mixtures are determined using synchrotron small-angle x-ray diffraction with a resolution of 10(-6) of the wave vector. The interplanar positional order derived from the width of lattice reflections extends over at least 500 lattice planes. The lattice planes are orientationally correlated within approximately 0.1 degrees throughout the crystals, whereas the stacking of hexagonal planes remains random.

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Crystalline smectic-B films as fluctuating systems: static and dynamic x-ray scattering.

Static and dynamic x-ray scattering has been used to characterize thermal fluctuations in free-standing smectic films in the crystalline-B phase. The results are remarkably similar to those in smectic-A films, in spite of the three-dimensional positional order in the crystalline-B phase. The main difference is the disappearance of the characteristic Landau-Peierls instability of the smectic-A phase. The dynamic nature of the fluctuations is explicitly demonstrated by x-ray photon correlation spectroscopy. This fluctuation behavior of crystalline-B films can be attributed to the small value of the shear elastic constant C44.

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Distribution of colloidal gold tracer within rat parasternal lymph nodes after intrapleural injection.

BACKGROUND: Tracer studies are an important tool to obtain information about the processes involved in the immunological response. Colloidal gold is widely used as a tracer, but its small size of label can cause some difficulty during low-resolution analysis. To overcome this difficulty, we developed a new method to follow the route of tracer movement within lymph nodes. METHODS: We applied conventional X-ray analysis, X-ray fluorescence analysis (XFA) subtractional microscopy using synchrotron radiation (SR) beams, light microscopy, and ultrastructural analysis to study the distribution and quantity of colloidal gold coupled with albumin within rat parasternal lymph node 2, 4, 6, 8, and 10 h after intrapleural injection of the tracer. RESULTS: At all the time points XFA-SR revealed that tracer formed a circle with a maximum concentration in the node periphery. XFA-SR measured colloidal gold concentration in the nodes reached its maximum (0.5-0.75 weight %) in 6-8 h. Subtractional microscopy revealed superficially located groups of cells filled with colloidal gold tracer. Light microscopy and ultrastructural analysis confirmed that the tracer was concentrated in the reticular cells, situated in the sinuses of the node. Sinusoidal reticular cells concentrated tracer at much higher rates than sinusoidal macrophages. Four hours after injection, gold appeared in the lysosomes of the follicular reticular cells. At the same time point, evidence of antigen presentation was obtained. Antigen presentation proved to be an extremely rara event since only one ultrastructural incident was found in 150 analysed grids. CONCLUSIONS: SR is a valuable tool for the analysis of gold tracer passage within the living organism.

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