PubMed Health⌕ Search

Biomedical subjects

Ilona Turowska-Tyrk

Publications and source records attributed to Ilona Turowska-Tyrk.

7 recordsLinked to original sources

Monitoring structural transformations in crystals. 8. Monitoring molecules and a reaction center during a solid-state Yang photocyclization.

Structural changes taking place in a crystal during an intramolecular photochemical reaction [the Yang photocyclization of the alpha-methylbenzylamine salt with 1-(4-carboxybenzoyl)-1-methyladamantane] were monitored step-by-step using X-ray structure analysis. This is the first example of such a study carried out for an intramolecular photochemical reaction. During the photoreaction, both the reactant and product molecules change their orientation, but the reactant changes more rapidly after the reaction is about 80% complete. The distance between directly reacting atoms in the reactant molecule is almost constant until about 80% reaction progress and afterwards decreases. The torsion angle defined by the reactant atoms that form the cyclobutane ring also changes in the final stages of the photoreaction. These phenomena are explained in terms of the influence of many product molecules upon a small number of reacting molecules. The adamantane portion shifts more than the remaining part of the anionic reactant species during the reaction, which is explained in terms of hydrogen bonding. The structural changes are accompanied by changes in the cell constants. The results obtained in the present study are compared with analogous results published for intermolecular reactions.

Journal Article↗

Monitoring structural transformations in crystals. 7. 1-Chloroanthracene and its photodimer.

Crystals of the 1-chloroanthracene photodimer, viz. trans-bi(1-chloro-9,10-dihydro-9,10-anthracenediyl), C(28)H(18)Cl(2), were obtained from the solid-state [4+4]-photodimerization of the monomer, C(14)H(9)Cl, followed by recrystallization. The symmetry of the product molecules is defined by the orientation of the reactant molecules in the crystal. The mutual orientation parameters calculated for adjacent monomers explain the reactivity of the compound. The molecules in the crystal of the monomer and the recrystallized photodimer pack differently and the photodimer has crystallographically imposed inversion symmetry.

Journal Article↗

Monitoring structural transformations in crystals. 6. The [4 + 4] photodimerization of 9-methylanthracene.

The structural changes in a crystal of 9-methylanthracene (1) during the [4 + 4] photodimerization were monitored by means of X-ray diffraction. This is the first example in the literature of such a study of a [4 + 4] photodimerization. The results obtained were compared with data for the [2 + 2] photodimerization. The shape of the product molecules and their preferred packing can explain the crystal disintegration. This was the reason that the reaction was monitored only to 28% completion. As far as could be determined the reaction proceeds with a constant rate. The cell volume increases at the beginning of the transformation and decreases afterwards. The product molecules do not assume a fixed position in the crystal during the photo-reaction, but move in a smooth way that includes a rotational component. The movements of the reactant are much smaller. Movements of molecules characterized by a rotational component were also observed in the case of the [2 + 2] photodimerization of 5-benzylidene-2-benzylcyclopentanone and 5-benzylidene-2-(4-chlorobenzyl)-cyclopentanone. The distance between the reacting atoms of the adjacent monomer molecules of (1) decreases with the degree of reaction completion, but more slowly than in the case of the [2 + 2] photodimerizations cited above. The orientation of the neighbouring monomer molecules changes during the phototransformation so that the monomer pair resembles the dimer product.

Journal Article↗

Monitoring structural transformations in crystals. 5. A topotactic [2 + 2]-photodimerization reaction.

The structural changes in a crystal of 5-benzylidene-2-(4-chlorobenzyl)cyclopentanone during [2 + 2]-photodimerization were monitored by means of X-ray diffraction. It was observed that the monomers moved gradually from the position occupied in the crystal at the initial stage of the photoreaction and the dimers moved towards the position assumed at the final step. The movements of the molecules possess a rotational component. Moreover, with the progress of the phototransformation the monomers in the reacting pair gradually move closer and change their relative orientation to resemble more the product molecule. The behaviour of the molecules and also the variation of the cell constants for the studied compound were compared with data for 5-benzylidene-2-benzylcyclopentanone.

Journal Article↗

Nickel(II) and Zinc(II) meso-Tetracyclohexylporphyrins. Structural and Electronic Effects Induced by meso-Cyclohexyl Substitution in Metalloporphyrins.

The synthesis and X-ray structures of the zinc(II) and nickel(II) complexes of meso-tetracyclohexylporphyrin H(2)(TCHP) are described. The nonplanarity of the meso substituents results in steric crowding at the porphyrin periphery. In the solid state, the nickel(II) complex Ni(TCHP) has a ruffled porphyrin conformation while Zn(TCHP) exhibits a stepped distortion of the macrocycle. In chloroform solution, fast rotation of the cyclohexyl groups on the NMR time scale is observed at room temperature for both complexes. Temperature-dependent (1)H NMR spectra showed that the (-g,g,-g,g) conformer of Zn(TCHP) and Ni(TCHP) is prevalent in solution at low temperatures and gave an estimate for the rotation barrier of the cyclohexyl groups (DeltaG(c)() = 10-12 kcal mol(-)(1)). In both complexes, the porphyrin ring is easier to oxidize and harder to reduce than in their tetraphenylporphyrin M(TPP) congeners, in agreement with the stronger electron-donating effect of the cyclohexyl group. The magnitude of the potential shift is larger for the first oxidation than for the first reduction, reflecting a smaller HOMO-LUMO energy gap and a greater degree of macrocycle distortion than in the M(TPP) derivatives. This information is of importance to understanding the protein regulation of electron-transfer processes by cytochrome c and other redox active proteins. Crystal data: Ni(TCHP).CHCl(3).CH(3)CN, monoclinic, C2/c, a = 27.405(12), b = 10.004(21), c = 32.877(24) Å, beta = 107.71(3) degrees at 127 K, Z = 8. Zn(TCHP), monoclinic, P2(1)/a, a = 11.159(15), b = 11.992(7), c = 13.465(20) Å, beta = 102.85(16) degrees at 127 K, Z = 2.

Journal Article↗