Biomedical subjects

In Seop Chang

Publications and source records attributed to In Seop Chang.

16 recordsLinked to original sources

PubMed2006

Nitrilotriacetic acid degradation under microbial fuel cell environment.

The removal of nitrilotriacetic acid (NTA) was studied under anaerobic conditions using oligotrophic and copiotrophic microbial fuel cells (MFCs) as a novel wastewater treatment process. Over 85% of NTA was removed from oligotrophic MFCs enriched and maintained with fuel containing NTA, whilst the value was around 20% in oligotrophic MFCs fed with NTA-free fuel, and in copiotrophic MFCs enriched with NTA containing fuel. The oligotrophic MFCs generated current with concomitant utilization of NTA when served as the sole organic compound, suggesting that NTA is oxidized its suitability as fuel in the MFCs.

Biodegradation, Environmental↗

PubMed2006

Enrichment, performance, and microbial diversity of a thermophilic mediatorless microbial fuel cell.

A thermophilic mediatorless microbial fuel cell (ML-MFC) was developed for continuous electricity production while treating artificial wastewater concurrently. A maximum power density of 1030 +/- 340 mW/m2 was generated continuously at 55 degrees C with an anode retention time of 27 min (11 mL h(-1)) and continuous pumping of air-saturated phosphate buffer into the cathode compartment at the retention time of 0.7 min (450 mL h(-1)). Meanwhile, about 80% of the electrons available from acetate oxidation were recovered as current. Denaturing gradient gel electrophoresis (DGGE) and direct 16S-rRNA gene analysis revealed that the bacterial diversity in this ML-MFC system was lower than the inoculum. Direct 16S rDNA analysis showed that the dominant bacteria representing 57.8% of total population in anode compartment was phylogenetically very closely related to an uncultured clone, clone E4. Two sheets of graphite used as the anode showed different dominant bacterial population. For the first time, it is shown that thermophilic electrochemically active bacteria can be enriched to concurrently generate electricity and treat artificial wastewater in a thermophilic ML-MFC.

Bacteria↗

PubMed2006

Electrically conductive bacterial nanowires produced by Shewanella oneidensis strain MR-1 and other microorganisms.

Shewanella oneidensis MR-1 produced electrically conductive pilus-like appendages called bacterial nanowires in direct response to electron-acceptor limitation. Mutants deficient in genes for c-type decaheme cytochromes MtrC and OmcA, and those that lacked a functional Type II secretion pathway displayed nanowires that were poorly conductive. These mutants were also deficient in their ability to reduce hydrous ferric oxide and in their ability to generate current in a microbial fuel cell. Nanowires produced by the oxygenic phototrophic cyanobacterium Synechocystis PCC6803 and the thermophilic, fermentative bacterium Pelotomaculum thermopropionicum reveal that electrically conductive appendages are not exclusive to dissimilatory metal-reducing bacteria and may, in fact, represent a common bacterial strategy for efficient electron transfer and energy distribution.

Bacterial Outer Membrane Proteins↗

PubMed2005

Continuous electricity production from artificial wastewater using a mediator-less microbial fuel cell.

A microbial fuel cell (MFC) was optimized in terms of MFC design factors and operational parameters for continuous electricity production using artificial wastewater (AW). The performance of MFC was analyzed through the polarization curve method under different conditions using a mediator-less MFC. The highest power density of 0.56 W/m2 was achieved with AW of 300 mg/l fed at the rate of 0.53 ml/min at 35 degrees C. The power per unit cell working volume was 102 mW/l, which was over 60 times higher than those reported in the previous mediator-less MFCs which did not use a cathode or an anode mediator. The power could be stably generated over 2 years.

Bioelectric Energy Sources↗

PubMed2005

Improvement of a microbial fuel cell performance as a BOD sensor using respiratory inhibitors.

Studies were made to improve the performance of a microbial fuel cell (MFC) as a biochemical oxygen demand (BOD) sensor. The signal from MFCs decreased in the presence of electron acceptors of higher redox potential such as nitrate and oxygen. The addition of azide and cyanide did not change the signal in the absence of the electron acceptors. The respiratory inhibitors eliminated the inhibitory effects of the electron acceptors on the current generation from MFCs. Similar results were obtained using oligotrophic MFCs fed with an environmental sample that contained nitrate. The use of the respiratory inhibitors is therefore recommended for the accurate BOD measurement of environmental samples containing nitrate and/or oxygen with an MFC-type BOD sensor.

Biosensing Techniques↗

PubMed2004

Construction of bacterial artificial chromosome library from electrochemical microorganisms.

A microbial fuel cell is a device that directly converts metabolic energy into electricity, using electrochemical technology. The analysis of large genome fragments recovered directly from microbial communities represents one promising approach to characterizing uncultivated electrochemical microorganisms. To further assess the utility of this approach, we constructed large-insert (140 kb) bacterial artificial chromosome (BAC) libraries from the genomic DNA of a microbial fuel cell, which had been operated for three weeks using acetate media. We screened the expression of several ferric reductase activities in the Escherichia coli host, in order to determine the extent of heterologous expression of metal-ion-reducing enzymes in the library. Phylogenetic analysis of 16S rRNA gene sequences recovered from the BAC libraries indicates that they contain DNA from a wide diversity of microbial organisms. The constructed bacterial library proved a powerful tool for exploring metal-ion reductase activities, providing information on the electron transport pathway of electrochemical microbial (ECM) organisms.

Bacteria↗

PubMed2004

Analysis of microbial diversity in oligotrophic microbial fuel cells using 16S rDNA sequences.

Molecular ecological techniques were applied to analyze the bacterial diversity of two oligotrophic microbial fuel cells (MFCs) enriched using river water or artificial wastewater (AWW) as fuel. Denaturing gradient gel electrophoresis (DGGE) of the PCR amplified 16S rDNA showed that different microbial communities were present in the two MFCs and these were different from the river sediment used to initiate the enrichment. Nearly complete 16S rDNA was amplified and sequenced. Over 80% of the clones were Proteobacteria. Betaproteobacteria were the dominant clones (46.2%) in MFCs fed with river water, and about 64.4% of the clones in MFCs fed with AWW were Alphaproteobacteria. Actinobacteria were found only in the MFC fed with AWW, and Deltaproteobacteria, Acidobacteria, Chloroflexi and Verrucomicrobia in the MFC fed with river water. Many clones were related to uncultured bacteria, some with homology less than 95%, indicating that many novel bacteria were enriched in the oligotrophic MFCs.

Actinobacteria↗

PubMed2004

Continuous determination of biochemical oxygen demand using microbial fuel cell type biosensor.

A mediator-less microbial fuel cell (MFC) was used as a biochemical oxygen demand (BOD) sensor in an amperometric mode for real-time wastewater monitoring. At a hydraulic retention time of 1.05 h, BOD values of up to 100 mg/l were measured based on a linear relationship, while higher BOD values were measured using a lower feeding rate. About 60 min was required to reach a new steady-state current after the MFCs had been fed with different strength artificial wastewaters (Aws). The current generated from the MFCs fed with AW with a BOD of 100 mg/l was compared to determine the repeatability, and the difference was less than 10%. When the MFC was starved, the original current value was regained with a varying recovery time depending on the length of the starvation. During starvation, the MFC generated a background level current, probably due to an endogenous metabolism.

Bioelectric Energy Sources↗

PubMed2004

Improving the dynamic response of a mediator-less microbial fuel cell as a biochemical oxygen demand (BOD) sensor.

The dynamic behavior of a mediator-less, microbial fuel cell (MFC) was studied as a continuous biochemical oxygen demand (BOD) sensor. The response time and the sensitivity were analyzed through the step-change testing of the fuel concentration. The MFC of 25 ml had the shortest response time of 36 +/- 2 min at the fuel-feeding rate of 0.53 ml min(-1) and the resistance of 10 ohms. A smaller MFC of 5 ml had a response time of 5 +/- 1 min.

Bacteria↗

PubMed2004

Differential expression of Desulfovibrio vulgaris genes in response to Cu(II) and Hg(II) toxicity.

The response of Desulfovibrio vulgaris to Cu(II) and Hg(II) was characterized. Both metals increased the lag phase, and Cu(II) reduced cell yield at concentrations as low as 50 microM. mRNA expression was analyzed using random arbitrarily primed PCR, differential display, and quantitative PCR. Both Cu(II) and Hg(II) (50 micro M) caused upregulation of mRNA expression for an ATP binding protein (ORF2004) and an ATPase (ORF856) with four- to sixfold increases for Hg(II) and 1.4- to 3-fold increases with Cu(II). These results suggest that D. vulgaris uses an ATP-dependent mechanism for adapting to toxic metals in the environment.

Base Sequence↗

PubMed2003

Use of acetate for enrichment of electrochemically active microorganisms and their 16S rDNA analyses.

A fuel cell-type electrochemical device has been used to enrich microbes oxidizing acetate with concomitant electricity generation without using an electron mediator from activated sludge. The device generated a stable current of around 5 mA with complete oxidation of 5 mM acetate at the hydraulic retention time of 2.5 h after 4 weeks of enrichment. Over 70% of electrons available from acetate oxidation was recovered as current. Carbon monoxide or hydrogen did not influence acetate oxidation or current generation from the microbial fuel cell (MFC). Denaturing gradient gel electrophoresis showed that DNA extracted from the acetate-enriched MFC had different 16S rDNA patterns from those of sludge or glucose+glutamate-enriched MFCs. Nearly complete 16S rDNA sequence analyses showed that diverse bacteria were enriched in the MFC fed with acetate. Electron microscopic observations showed biofilm developed on the electrode, but not microbial clumps observed in MFCs fed with complex fuel such as glucose and wastewater from a corn-processing factory.

Acetates↗

PubMed2003

A novel electrochemically active and Fe(III)-reducing bacterium phylogenetically related to Aeromonas hydrophila, isolated from a microbial fuel cell.

A facultative anaerobic bacterium was isolated from a mediator-less microbial fuel cell fed with artificial wastewater containing acetate and designated as PA3. The isolate was identified as a strain of Aeromonas hydrophila based on its biochemical, physiological and morphological characteristics as well as 16S rDNA sequence analysis and DNA-DNA hybridization. PA3 used glucose, glycerol, pyruvate and hydrogen to reduce Fe(III), nitrate and sulfate. Cyclic voltammetry showed that PA3 was electrochemically active and was the culture collection strain A. hydrophila KCTC 2358. Electricity was generated from a fuel cell-type reactor, the anode compartment of which was inoculated with cell suspensions of the isolate or A. hydrophila KCTC 2358. The electrochemical activities are novel characteristics of A. hydrophila.

Aeromonas hydrophila↗

PubMed2003

Purification and characterization of complement-activating acidic polysaccharides from the fruits of Capsicum annuum.

Hot water-soluble crude polysaccharide (HCAP-0) that was obtained from the fruits of Capsicum annuum showed potent anti-complementary activity. The activity was unchanged by pronase digestion, but decreased by periodate oxidation. The HCAP-0 was fractionated by DEAE ion-exchange chromatography to give two major fractions, HCAP-II and III. These two fractions were finally purified by gel filtration to give HCAP-IIa, HCAPIIIa1, and IIIa2 fractions that had high anti-complementary activities. The HCAP-IIIa1 and IIIa2 consisted of homogeneous polysaccharides. The anti-complementary activities were unaffected by treatment with polymyxin B, indicating that the modes of complement activation were not due to preexisting lipopolysaccharide. The molecular weight and sugar content of HCAP-IIIa2 had potent anti-complementary activity. The highest yields were 55 kDa and 75.9%, and the molar ratio of galactose (Ara:Gal, 1.0:4.6) was higher than other sugars. The crossed immuno-electrophoresis showed that both classical and alternative pathways were activated by HCAP-IIIa2.

Bacteria↗

PubMed2003

Evidence for chimeric sequences formed during random arbitrarily primed PCR.

Chimeric sequences were observed to occur abundantly (48% of clones) during random arbitrarily primed polymerase chain reaction (RAP-PCR) experiments designed to examine differential expression of genes involved in metal resistance in sulfate-reducing bacteria (SRB). Some of the chimeric sequences were composed of sequence from a gene differentially expressed under the imposed conditions and a sequence of the 16S or 23S rRNA gene. The remainder were composed of two rRNA sequences. Experiments using PCR and genomic sequence analysis showed that the chimeric sequences were not due to a genetic mutation (e.g., recombination, transposition). As RAP-PCR has been widely used to identify differentially expressed genes, this observation may aid in our interpretation of RAP-PCR data.

Base Sequence↗

PubMed2003

Novel BOD (biological oxygen demand) sensor using mediator-less microbial fuel cell.

A microbial fuel cell type of biosensor was used to determine the biochemical oxygen demand (BOD) of wastewater. The biosensor gave a good correlation between the BOD value and the coulomb produced. The BOD sensor has been operated for over 5 years in a stable manner without any servicing. This is much longer that that of previously reported BOD biosensors.

Bioelectric Energy Sources↗

PubMed2003

A microbial fuel cell with improved cathode reaction as a low biochemical oxygen demand sensor.

Mediator-less microbial fuel cells (MFC) enriched with oligotrophic microbes were optimized through enhancement of cathode reaction and lowering O2 diffusion into the anode compartment as a low BOD sensor. The optimization of the MFC has greatly improved the maximum current and coulomb yield. The oligotroph-type MFC could be used as a low BOD sensor with high operational stability, good repeatability and reproducibility.

Bacterial Physiological Phenomena↗