PubMed Health⌕ Search

Biomedical subjects

Ingmar Grenthe

Publications and source records attributed to Ingmar Grenthe.

12 recordsLinked to original sources

Structure, equilibrium and ligand exchange dynamics in the binary and ternary dioxouranium(VI)-ethylenediamine-N,N'-diacetic acid-fluoride system: A potentiometric, NMR and X-ray crystallographic study.

The structure, thermodynamics and kinetics of the binary and ternary uranium(VI)-ethylenediamine-N,N'-diacetate (in the following denoted EDDA) fluoride systems have been studied using potentiometry, 1H, 19F NMR spectroscopy and X-ray diffraction. The UO2(2+)-EDDA system could be studied up to -log[H3O+] = 3.4 where the formation of two binary complexes UO2(EDDA)(aq) and UO2(H3EDDA)3+ were identified, with equilibrium constants logbeta(UO2EDDA) = 11.63 +/- 0.02 and logbeta(UO2H3EDDA3+) = 1.77 +/- 0.04, respectively. In the ternary system the complexes UO2(EDDA)F-, UO2(EDDA)(OH)- and (UO2)2(mu-OH)2(HEDDA)2F2(aq) were identified; the latter through 19F NMR. 1H NMR spectra indicate that the EDDA ligand is chelate bonded in UO2(EDDA)(aq), UO2(EDDA)F- and UO2(EDDA)(OH)- while only one carboxylate group is coordinated in UO2(H3EDDA)3+. The rate and mechanism of the fluoride exchange between UO2(EDDA)F- and free fluoride was studied by 19F NMR spectroscopy. Three reactions contribute to the exchange; (i) site exchange between UO2(EDDA)F- and free fluoride without any net chemical exchange, (ii) replacement of the coordinated fluoride with OH- and (iii) the self dissociation of the coordinated fluoride forming UO2(EDDA)(aq); these reactions seem to follow associative mechanisms. (1)H NMR spectra show that the exchange between the free and chelate bonded EDDA is slow and consists of several steps, protonation/deprotonation and chelate ring opening/ring closure, the mechanism cannot be elucidated from the available data. The structure (UO2)2(EDDA)2(mu-H2EDDA) was determined by single crystal X-ray diffraction and contains two UO2(EDDA) units with tetracoordinated EDDA linked by H2EDDA in the "zwitterion" form, coordinated through a single carboxylate oxygen from each end to the two uranium atoms. The geometry of the complexes indicates that there is no geometric constraint for an associative ligand substitution mechanism.

Crystallography, X-Ray↗

Quantum chemical calculations of reduction potentials of AnO2(2+)/AnO2+ (An = U, Np, Pu, Am) and Fe3+/Fe2+ couples.

The reduction potentials of the AnO(2)(H(2)O)(5)(2+)/AnO(2)(H(2)O)(5)(+) couple (An = U, Np, Pu, and Am) and Fe(H(2)O)(6)(3+) to Fe(H(2)O)(6)(2+) in aqueous solution were calculated at MP2, CASPT2, and CCSD(T) levels of theory. Spin-orbit effects for all species were estimated at the CASSCF level. Solvation of the hydrated metal cations was modeled both by polarizable conductor model (PCM) calculation and by solvating the solutes with over one thousand TIP3P water molecules in the QM/MM framework. The redox reaction energy calculated by QM/MM method agreed well with the PCM method after corrections using the classical Born formula for the contribution from the rest of the solvation sphere and correction for dynamic response of solvent polarization in the MM region. Calculated reduction potentials inclusive of spin-orbit effect, zero-point energy, thermal corrections, entropy effect, and PCM solvation energy were found to be comparable with experimental data. The difference between CASPT2 calculated and experimental reduction energies were less than 35 kJ/mol in all cases, which ensures that CASPT2 (and CCSD(T)) calculations provide reasonable estimates of the thermochemistry of these reactions.

Journal Article↗

A theoretical study of the fluoride exchange between UO2F+(aq) and UO2 2+(aq).

Experimental data on the thermodynamics and reaction mechanism of the inner-sphere fluoride exchange reaction U17O2(2+) + UO2F+ <==> U17O2F+ + UO2(2+) have been compared with different intimate reaction mechanisms using quantum chemical methods. Two models have been tested that start from the outer sphere complexes, (H2O)[U(A)O2F(OH2)4+]...[U(B)O2(OH2)5(2+)] and [U(A)O2F(OH2)4+]...[U(B)O2(OH2)5(2+)]; the geometry and energies of the intermediates and transition states along possible reaction pathways have been calculated using different ab initio methods, SCF, B3LYP and MP2. Both the experimental data and the theoretical results suggest that the fluoride exchange takes place via the formation and breaking of a U-F-U bridge that is the rate determining step. The calculated activation enthalpy DeltaH( not equal) = 30.9 kJ mol(-1) is virtually identical to the experimental value 31 kJ mol(-1); however this agreement may be a coincidence as we do not expect a larger accuracy than 10 kJ mol(-1) with the methods used. The calculations show that the fluoride bridge is formed as an insertion of U(A)O2)F(OH2)4+ into U(B)O2(OH2)5(2+) followed by a subsequent transfer of water from the first to the second coordination sphere of U(B).

Journal Article↗

Structural and kinetic studies on uranyl(V) carbonate complex using 13C NMR spectroscopy.

We have measured 13C NMR spectra of uranyl(V) carbonate complex in D2O solution containing 1.003 M Na2(13)CO3 at various temperatures. Two singlet signals corresponding to free and coordinated CO3(2-) were observed at 169.13 and 106.70 ppm, respectively. From the peak area ratio, the structure of the uranyl(V) carbonate complex was determined as [U(V)O2(CO3)3]5-. Furthermore, kinetic analyses of the exchange reaction of free and coordinated CO3(2-) in [U(V)O2(CO3)3]5- were carried out using 13C NMR line-broadening. As a result, the first-order rate constant at 298 K and the activation parameters for CO3(2-) exchange reaction in [U(V)O2(CO3)3]5- were evaluated as 1.13 x 10(3) s(-1) and deltaH(double dagger) = 62.0 +/- 0.7 kJ x mol(-1), deltaS(double dagger) = 22 +/- 3 J x mol(-1) x K(-1), respectively. We suggest that the exchange follows a dissociative mechanism as in the corresponding [U(VI)O2(CO3)3]4- complex.

Journal Article↗

Electron transfer in neptunyl(VI)-neptunyl(V) complexes in solution.

The rates and mechanisms of the electron self-exchange between Np(V) and Np(VI) in solution have been studied with quantum chemical methods and compared with previous results for the U(V)-U(VI) pair. Both outer-sphere and inner-sphere mechanisms have been investigated, the former for the aqua ions, the latter for binuclear complexes containing hydroxide, fluoride, and carbonate as bridging ligand. Solvent effects were calculated using the Marcus equation for the outer-sphere reactions and using a nonequilibrium PCM method for the inner-sphere reactions. The nonequilibrium PCM appeared to overestimate the solvent effect for the outer-sphere reactions. The calculated rate constant for the self-exchange reaction NpO2(+)(aq) + NpO2(2+)(aq) right harpoon over left harpoon NpO2(2+)(aq) + NpO2(+)(aq), at 25 degrees C is k = 67 M(-1) s(-1), in fair agreement with the observed rates 0.0063-15 M(-1) s(-1). The differences between the Np(V)-Np(VI) and the U(V)-U(VI) pairs are minor.

Journal Article↗

Experimental and quantum chemical studies of structure and reaction mechanisms of dioxouranium(VI) complexes in solution.

This perspective article describes the combination of experimental data and quantum chemical methods for the determination of structure and reaction mechanisms of uranyl(vi) complexes in aqueous solution. The first part assesses the accuracy of the chemical and thermodynamic properties of solvated uranyl(vi) complexes as obtained by various quantum chemical methods. The second part discusses structure determination, mechanisms for ligand exchange and the lability of coordinated water molecules for various uranyl(vi) complexes using a combination of NMR and quantum chemical data.

Journal Article↗

Electron transfer in uranyl(VI)-uranyl(V) complexes in solution.

The rates and mechanisms of the electron self-exchange between U(V) and U(VI) in solution have been studied with quantum chemical methods. Both outer-sphere and inner-sphere mechanisms have been investigated; the former for the aqua ions, the latter for binuclear complexes containing hydroxide, fluoride, and carbonate as bridging ligand. The calculated rate constant for the self-exchange reaction UO(2)(+)(aq) + UO(2)(2+)(aq) <=>UO(2)(2+)(aq) + UO(2)(+)(aq), at 25 degrees C, is k = 26 M(-1) s(-1). The lower limit of the rate of electron transfer in the inner-sphere complexes is estimated to be in the range 2 x 10(4) to 4 x 10(6) M(-1) s(-1), indicating that the rate for the overall exchange reaction may be determined by the rate of formation and dissociation of the binuclear complex. The activation energy for the outer-sphere model calculated from the Marcus model is nearly the same as that obtained by a direct calculation of the precursor- and transition-state energy. A simple model with one water ligand is shown to recover 60% of the reorganization energy. This finding is important because it indicates the possibility to carry out theoretical studies of electron-transfer reactions involving M(3+) and M(4+) actinide species that have eight or nine water ligands in the first coordination sphere.

Journal Article↗

The mechanism of water exchange in AmO2(H2O)5(2+) and in the isoelectronic UO2(H2O)5(+) and NpO2(H2O)5(2+) complexes as studied by quantum chemical methods.

The water exchange mechanism for AmO2(H2O)52+ and the isoelectronic UO2(H2O)5+ and NpO2(H2O)52+ ions has been investigated using quantum chemical methods and compared to previous findings in the uranyl(VI) system (Vallet, V. et al. J. Am. Chem. Soc. 2001, 123, 11999). There are substantial and predictable changes in the geometry and preferred exchange pathways between uranyl(V) and the different actinyl(VI) complexes. The smaller charge on the uranyl(V) center makes the dissociative pathway more favorable than the associative/interchange pathways in the actinyl(VI) systems.

Journal Article↗

Chelate effect and thermodynamics of metal complex formation in solution: a quantum chemical study.

The accuracy of quantum chemical predictions of structures and thermodynamic data for metal complexes depends both on the quantum chemical methods and the chemical models used. A thermodynamic analogue of the Eigen-Wilkins mechanism for ligand substitution reactions (Model A) turns out to be sufficiently simple to catch the essential chemistry of complex formation reactions and allows quantum chemical calculations at the ab initio level of thermodynamic quantities both in gas phase and solution; the latter by using the conductor-like polarizable continuum (CPCM) model. Model A describes the complex formation as a two-step reaction: 1. [M(H2O)x](aq) + L(aq) <==>[M(H2O)x], L(aq); 2. [M(H2O)x], L(aq) <==>[M(H2O)(x-1)L],(H2O)(aq). The first step, the formation of an outer-sphere complex is described using the Fuoss equation and the second, the intramolecular exchange between an entering ligand from the second and water in the first coordination shell, using quantum chemical methods. The thermodynamic quantities for this model were compared to those for the reaction: [M(H2O)x](aq) + L(aq) <==>[M(H2O)(x-1)L](aq) + (H2O)(aq) (Model B), as calculated for each reactant and product separately. The models were tested using complex formation between Zn(2+) and ammonia, methylamine, and ethylenediamine, and complex formation and chelate ring closure reactions in binary and ternary UO(2)(2+)-oxalate systems. The results show that the Gibbs energy of reaction for Model A are not strongly dependent on the number of water ligands and the structure of the second coordination sphere; it provides a much more precise estimate of the thermodynamics of complex formation reactions in solution than that obtained from Model B. The agreement between the experimental and calculated data for the formation of Zn(NH(3))(2+)(aq) and Zn(NH(3))(2)(2+)(aq) is better than 8 kJ/mol for the former, as compared to 30 kJ/mol or larger, for the latter. The Gibbs energy of reaction obtained for the UO(2)(2+) oxalate systems using model B differs between 80 and 130 kJ/mol from the experimental results, whereas the agreement with Model A is better. The errors in the quantum chemical estimates of the entropy and enthalpy of reaction are somewhat larger than those for the Gibbs energy, but still in fair agreement with experiments; adding water molecules in the second coordination sphere improves the agreement significantly. Reasons for the different performance of the two models are discussed. The quantum chemical data were used to discuss the microscopic basis of experimental enthalpy and entropy data, to determine the enthalpy and entropy contributions in chelate ring closure reactions and to discuss the origin of the so-called "chelate effect". Contrary to many earlier suggestions, this is not even in the gas phase, a result of changes in translation entropy contributions. There is no simple explanation of the high stability of chelate complexes; it is a result of both enthalpy and entropy contributions that vary from one system to the other.

Journal Article↗

Structure and bonding in solution of dioxouranium(VI) oxalate complexes: isomers and intramolecular ligand exchange.

Structural isomers of [UO(2)(oxalate)(3)](4-), [UO(2)(oxalate)F(3)](3-), [UO(2)(oxalate)(2)F](3-), and [UO(2)(oxalate)(2)(H(2)O)](2-) have been studied by using EXAFS and quantum chemical ab initio methods. Theoretical structures and their relative energies were determined in the gas phase and in water using the CPCM model. The most stable isomers according to the quantum chemical calculations have geometries consistent with the EXAFS data, and the difference between measured and calculated bond distances is generally less than 0.05 A. The complex [UO(2)(oxalate)(3)](4-) contains two oxalate ligands forming five-membered chelate rings, while the third is bonded end-on to a single carboxylate oxygen. The most stable isomer of the other two complexes also contains the same type of chelate-bonded oxalate ligands. The activation energy for ring opening in [UO(2)(oxalate)F(3)](3-), deltaU++ = 63 kJ/mol, is in fair agreement with the experimental activation enthalpy, deltaH++ = 45 +/- 5 kJ/mol, for different [UO(2)(picolinate)F(3)](2-) complexes, indicating similar ring-opening mechanisms. No direct experimental information is available on intramolecular exchange in [UO(3)(oxalate)(3)](4-). The theoretical results indicate that it takes place via the tris-chelated intermediate with an activation energy of deltaU++ = 38 kJ/mol; the other pathways involve multiple steps and have much higher activation energies. The geometries and energies of dioxouranium(VI) complexes in the gas phase and solvent models differ slightly, with differences in bond distance and energy of typically less than 0.06 A and 10 kJ/mol, respectively. However, there might be a significant difference in the distance between uranium and the leaving/entering group in the transition state, resulting in a systematic error when the gas-phase geometry is used to estimate the activation energy in solution. This systematic error is about 10 kJ/mol and tends to cancel when comparing different pathways.

Journal Article↗

Rates and mechanism of fluoride and water exchange in UO(2)F(5)(3-) and [UO(2)F(4)(H(2)O)](2-) studied by NMR spectroscopy and wave function based methods.

The reaction mechanism for the exchange of fluoride in UO(2)F(5)(3-) and UO(2)F(4)(H(2)O)(2-) has been investigated experimentally using (19)F NMR spectroscopy at -5 degrees C, by studying the line broadening of the free fluoride, UO(2)F(4)(2-)(aq) and UO(2)F(5)(3-), and theoretically using quantum chemical methods to calculate the activation energy for different pathways. The new experimental data allowed us to make a more detailed study of chemical equilibria and exchange mechanisms than in previous studies. From the integrals of the different individual peaks in the new NMR spectra, we obtained the stepwise stability constant K(5) = 0.60 +/- 0.05 M(-1) for UO(2)F(5)(3-). The theoretical results indicate that the fluoride exchange pathway of lowest activation energy, 71 kJ/mol, in UO(2)F(5)(3-) is water assisted. The pure dissociative pathway has an activation energy of 75 kJ/mol, while the associative mechanism can be excluded as there is no stable UO(2)F(6)(4-) intermediate. The quantum chemical calculations have been made at the SCF/MP2 levels, using a conductor-like polarizable continuum model (CPCM) to describe the solvent. The effects of different model assumptions on the activation energy have been studied. The activation energy is not strongly dependent on the cavity size or on interactions between the complex and Na(+) counterions. However, the solvation of the complex and the leaving fluoride results in substantial changes in the activation energy. The mechanism for water exchange in UO(2)F(4)(H(2)O)(2-) has also been studied. We could eliminate the associative mechanism, the dissociative mechanism had the lowest activation energy, 39 kJ/mol, while the interchange mechanism has an activation energy that is approximately 50 kJ/mol higher.

Journal Article↗