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Irina V Novozhilova

Publications and source records attributed to Irina V Novozhilova.

9 recordsLinked to original sources
PubMed2006

Experimental and density functional theoretical investigations of linkage isomerism in six-coordinate FeNO(6) iron porphyrins with axial nitrosyl and nitro ligands.

A critical component of the biological activity of NO and nitrite involves their coordination to the iron center in heme proteins. Irradiation (330 < lambda < 500 nm) of the nitrosyl-nitro compound (TPP)Fe(NO)(NO(2)) (TPP = tetraphenylporphyrinato dianion) at 11 K results in changes in the IR spectrum associated with both nitro-to-nitrito and nitrosyl-to-isonitrosyl linkage isomerism. Only the nitro-to-nitrito linkage isomer is obtained at 200 K, indicating that the isonitrosyl linkage isomer is less stable than the nitrito linkage isomer. DFT calculations reveal two ground-state conformations of (porphine)Fe(NO)(NO(2)) that differ in the relative axial ligand orientations (i.e., GS parallel and GS perpendicular). In both conformations, the FeNO group is bent (156.4 degrees for GS parallel, 159.8 degrees for GS perpendicular) for this formally {FeNO}(6) compound. Three conformations of the nitrosyl-nitrito isomer (porphine)Fe(NO)(ONO) (MSa parallel, MSa perpendicular, and MSa(L)) and two conformations of the isonitrosyl-nitro isomer (porphine)Fe(ON)(NO(2)) (MSb parallel and MSb perpendicular) are identified, as are three conformations of the double-linkage isomer (porphine)Fe(ON)(ONO) (MSc parallel, MSc perpendicular, MSc(L)). Only 2 of the 10 optimized geometries contain near-linear FeNO (MSa(L)) and FeON (MSc(L)) bonds. The energies of the ground-state and isomeric structures increase in the order GS < MSa < MSb < MSc. Vibrational frequencies for all of the linkage isomers have been calculated, and the theoretical gas-phase absorption spectrum of (porphine)Fe(NO)(NO(2)) has been analyzed to obtain information on the electronic transitions responsible for the linkage isomerization. Comparison of the experimental and theoretical IR spectra does not provide evidence for the existence of a double linkage isomer of (TPP)Fe(NO)(NO(2)).

Crystallography, X-Ray↗
PubMed2005

Shedding light on the structure of a photoinduced transient excimer by time-resolved diffraction.

Time-resolved single-crystal diffraction performed with synchrotron radiation shows that the 53(1) micros phosphorescent state, generated in the crystalline phase of trimeric {[3,5-(CF3)(2)Pyrazolate]Cu}(3) molecules by exposure to 355 nm of light at 17 K, is due to the formation of an excimer rather than the shortening of the intramolecular Cu...Cu distances within the trimeric units, or the formation of a continuous chain of interacting molecules. One of the intermolecular Cu...Cu distances contracts by 0.56 Angstroms from 4.018(1) to 3.46(1) Angstroms;, whereas the interplanar spacing of the trimers is reduced by 0.65 Angstroms; from 3.952(1) to 3.33(1) Angstroms. Density-functional theory calculations support the formation of a Cu...Cu bond through the intermetallic transfer of a Cu 3d electron to a molecular orbital with a large 4p contribution on the reacting Cu atoms.

Journal Article↗
PubMed2004

Single- and double-linkage isomerism in a six-coordinate iron porphyrin containing nitrosyl and nitro ligands.

Density Functional theoretical calculations confirm the experimental observation that the low-temperature photolysis of (TPP)Fe(NO)(NO2) (as a KBr pellet) results in the generation of linkage isomers involving the axial NO and NO2 groups and suggest the possible formation of the double linkage isomer (TPP)Fe(ON)(ONO). The energy difference between the ground state (porphine)Fe(NO)(NO2) and the double-linkage isomer (porphine)Fe(ON)(ONO) is 1.57 eV, which is comparable to the 1.59 eV calculated previously for the nitrosyl-to-isonitrosyl linkage isomerism in the five-coordinate (porphine)Fe(NO) analogue.

Iron↗
PubMed2004

Geometry changes of a Cu(I) phenanthroline complex on photoexcitation in a confining medium by time-resolved X-ray diffraction.

Using a stroboscopic technique, in which the molecule is repeatedly excited and the structural change is probed more than 5000 times per second immediately after excitation, we performed a 16 K time-resolved single-crystal study of the microsecond lifetime triplet state of the Cu(I)phenanthroline derivative[Cu(I)(dmp)(dppe)][PF6] (dppe = 1,2-bis(diphenylphosphino)ethane). The geometry changes on excitation differ for the two symmetry-independent molecules, but are in the same direction as calculated for an isolated reference molecule, although the flattening distortion in the crystal is significantly smaller, implying that the reorganization energy is greatly affected by the confining medium.

Journal Article↗
PubMed2004

On the nature of the lowest triplet excited state of the [Rh 2(1,3-diisocyanopropane)(4)]2+ ion.

The nature of the ground state and the lowest triplet excited state of the [Rh(2)(1,3-diisocyanopropane)(4)](2+) ion have been investigated by the density functional theory. Two locally stable geometrical conformations are found on the potential energy surfaces of both the ground and excited states, corresponding to the eclipsed and twisted conformations, the eclipsed conformation being more stable and having the shorter Rh-Rh bond length. While the Rh-Rh distances of the two conformations differ by approximately 0.4 A, they shorten to the same value upon excitation ( approximately 3.1 A). The excited state originates from the d(z)()()2 (metal antibonding) to p(z)() (ligand-metal bonding) electronic transition. The Mayer Rh-Rh bond order increases from approximately 0.2 to more than 0.8 upon excitation, while the Rh-C(N) bond order shows a slight decrease. A topological bond path between the Rh atoms is found in both the ground and excited states, while the electron localization function (ELF) indicates weak Rh-Rh covalent bonding for the excited state only.

Journal Article↗
PubMed2003

Solid-state structure dependence of the molecular distortion and spectroscopic properties of the Cu(I) bis(2,9-dimethyl-1,10-phenanthroline) ion.

The relation between the geometry and spectroscopic properties of a series of salts of the Cu(I) bis(2,9-dimethyl-1,10-phenanthroline) ion, (Cu((I))(dmp)(2))(+), is explored. The distortions from the idealized D(2)(d)() geometry, which include flattening, rocking of the dmp ligands, and displacement of the Cu atoms out of the dmp planes, show considerable variation, indicating the importance of packing forces in the crystalline environment. The change in the absorption spectra upon flattening of the complex, expressed as the variation of the angle between the dmp planes, which varies from 88 degrees in the BF(4) and tosylate salts to 73 degrees in the picrate, agrees qualitatively with parallel DFT calculations. No correlation is found between ground state geometry and luminescence lifetimes, recorded both at room temperature and at 16 K. The low temperature lifetimes vary by a factor of 8 among the (Cu((I))(dmp)(2))(+) salts examined, the longest lifetime (2.4 micros at 16 K) being observed for the tosylate salt.

Journal Article↗
PubMed2003

Theoretical analysis of the triplet excited state of the [Pt2(H2P2O5)4]4- ion and comparison with time-resolved X-ray and spectroscopic results.

A full understanding of the nature of excited states of transition metal complexes is important for understanding their chemical reactivity and role as intermediates in photochemically induced reactions. The ground and excited states of the [Pt(2)(pop)(4)](4-) ion are investigated using density functional theory (DFT). Calculations with different functionals employing quasi-relativistic Pauli and ZORA formalisms all predict a Pt-Pt bond shortening and a slight Pt-P lengthening upon excitation to the lowest triplet state, the latter in apparent contradiction to experimental EXAFS results. The PW86LYP functional with the ZORA relativistic treatment is found to produce good agreement with time-resolved crystallographic and spectroscopic results. A topological bond path between the Pt atoms is found in both the ground and the excited states, though the electron localization function (ELF) indicates weak Pt-Pt covalent bonding for the excited state only. The spin density is mainly localized on the Pt atoms, giving insight into the ability of the triplet excited state to abstract hydrogen and halogen atoms from organic substrates.

Journal Article↗
PubMed2003

Introductory lecture: Time-resolved chemistry at atomic resolution.

Though time-resolved studies are still at an early stage, the field is rapidly being developed and applied to an increasingly broad spectrum of problems with timescales varying from seconds or more down to femtoseconds. In this overview a number of different techniques are discussed, with emphasis on chemical applications in which information is obtained at the atomic level. The need to correlate with theory, both for calibration of theoretical methods and to obtain related information not accessible experimentally, is stressed.

Journal Article↗