About 140,000 years ago, the breakup of large continental ice sheets initiated the Last Interglacial period. Sea level rose and peaked around 135,000 years ago about 14 meters below present levels. A record of Last Interglacial sea levels between 116,000 years to 136, 000 years ago is preserved at reef VII of the uplifted coral terraces of Huon Peninsula in Papua New Guinea. However, corals from a cave situated about 90 meters below the crest of reef VII are 130, 000 +/- 2000 years old and appear to have grown in conditions that were 6 degreesC cooler than those at present. These observations imply a drop in sea level of 60 to 80 meters. After 130,000 years, sea level began rising again in response to the major insolation maximum at 126,000 to 128,000 years ago. The early (about 140,000 years ago) start of the penultimate deglaciation, well before the peak in insolation, is consistent with the Devils Hole chronology.

Journal Article↗

PubMed1999

Coral record of equatorial sea-surface temperatures during the penultimate deglaciation at huon peninsula

Uplifted coral terraces at Huon Peninsula, Papua New Guinea, preserve a record of sea level, sea-surface temperature, and salinity from the penultimate deglaciation. Remnants have been found of a shallow-water reef that formed during a pause, similar to the Younger Dryas, in the penultimate deglaciation at 130,000 +/- 2000 years ago, when sea level was 60 to 80 meters lower than it is today. Porites coral, which grew during this period, has oxygen isotopic values and strontium/calcium ratios that indicate that sea-surface temperatures were much cooler (22 degrees +/- 2 degreesC) than either Last Interglacial or present-day tropical temperatures (29 degrees +/- 1 degreesC). These observations provide further evidence for a major cooling of the equatorial western Pacific followed by an extremely rapid rise in sea level during the latter stages of Termination II.

Journal Article↗

PubMed1999

An encyclopedia of mouse genes.

The laboratory mouse is the premier model system for studies of mammalian development due to the powerful classical genetic analysis possible (see also the Jackson Laboratory web site, http://www.jax.org/) and the ever-expanding collection of molecular tools. To enhance the utility of the mouse system, we initiated a program to generate a large database of expressed sequence tags (ESTs) that can provide rapid access to genes. Of particular significance was the possibility that cDNA libraries could be prepared from very early stages of development, a situation unrealized in human EST projects. We report here the development of a comprehensive database of ESTs for the mouse. The project, initiated in March 1996, has focused on 5' end sequences from directionally cloned, oligo-dT primed cDNA libraries. As of 23 October 1998, 352,040 sequences had been generated, annotated and deposited in dbEST, where they comprised 93% of the total ESTs available for mouse. EST data are versatile and have been applied to gene identification, comparative sequence analysis, comparative gene mapping and candidate disease gene identification, genome sequence annotation, microarray development and the development of gene-based map resources.

Animals↗

PubMed1999

Isoprenoid biosynthesis in plants: carbon partitioning within the cytoplasmic pathway.

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Carbon↗

PubMed1999

The roles of the sun and the landscape in pigeon homing.

It seems reasonable to assume that pigeons use visual features in the landscape for orientation when they are homing over familiar terrain. Experimental evidence to prove or disprove this possibility is, however, difficult to obtain. Here, we link the problem with the observation that deflections of initial orientation caused by clock-shift are often smaller than predicted on a pure sun compass basis. We substantiate the hypothesis that consistently reduced deflections and increased angular scatter occur only when pigeons are released in familiar areas where a remembered pattern of landscape features can conflict with the position of the sun. Repeated releases of the same individuals under clock-shift, or elimination of non-visual navigational clues (odours), appear to strengthen the conflicting influence of familiar visual landmarks. Accelerated returns of birds allowed to preview the surrounding familiar scenery before release also support the conclusion that the visual environment is included in the homing system of pigeons. The landscape, however, not only helps home-finding, if it is familiar, but may also have a distracting influence that contributes to the great variability of initial orientation patterns.

Journal Article↗

PubMed1998

Temperature and surface-ocean water balance of the mid-holocene tropical western pacific

Skeletal Sr/Ca and 18O/16O ratios in corals from the Great Barrier Reef, Australia, indicate that the tropical ocean surface approximately 5350 years ago was 1 degrees C warmer and enriched in 18O by 0.5 per mil relative to modern seawater. The results suggest that the temperature increase enhanced the evaporative enrichment of 18O in seawater. Transport of part of the additional atmospheric water vapor to extratropical latitudes may have sustained the 18O/16O anomaly. The reduced glacial-Holocene shift in seawater 18O/16O ratio produced by the mid-Holocene 18O enrichment may help to reconcile the different temperature histories for the last deglaciation given by coral Sr/Ca thermometry and foraminiferal oxygen-isotope records.

Journal Article↗

PubMed1998

Molecular characterization of tobacco squalene synthase and regulation in response to fungal elicitor.

The enzyme squalene synthase (SS) represents the first commitment of carbon from the general isoprenoid pathway toward sterol biosynthesis and is a potential point for regulation of sterol biosynthesis. The isolation and characterization of tobacco (Nicotiana tabacum) squalene synthase (TSS) cDNA and genomic DNA clones, as well as determination of the steady state level of TSS mRNA in response to elicitor treatment, were investigated. cDNA clones for TSS were isolated from poly (A)+ RNA using a reverse transcription/polymerase chain reaction (RT/PCR) method. A 1233-bp cDNA clone was generated that contained an open reading frame of 411 amino acids giving a predicted molecular mass of 46.9 kDa. Comparison of the TSS deduced amino acid sequence with currently described SS from different species showed the highest identify with Nicotiana benthamiana (97%), followed by Glycyrrhiza glabra (81%), Arabidopsis thaliana (74%), rat (40%), and yeast (37%). Expression of a soluble form of the TSS enzyme with enzymatic activity in Escherichia coli was achieved by truncating 24 hydrophobic amino acids at the carboxy terminus. Characterization of genomic TSS (gTSS) revealed a gene of 7.086 kb with a complex organization of small exons and large introns not typical of plant genes. Southern blot hybridization indicated only two copies of the SS gene in the tobacco genome. Treatment of tobacco cell suspension cultures with a fungal elicitor dramatically reduced TSS enzymatic activity, lowering it to zero within 24 h. Analysis of TSS mRNA levels, by RNA blot hybridization and primer extension assays, in elicitor-treated cells indicated that the transcript level remained largely unchanged over this 24-h period. These results suggest that the suppression of TSS enzyme activity in elicitor-treated cells may result from a posttranscriptional modification of TSS.

Amino Acid Sequence↗

PubMed1998

Homing pigeons use olfactory cues for navigation in england

Although the use of olfactory cues in pigeon navigation is well established, the generality of olfactory navigation remains uncertain because of apparent variability in results gained by different researchers in different regions. We report the results of the first experiments investigating the effect of anosmia on homing pigeons reared in a previously uninvestigated region, southern England. In series 1, experienced birds showed little effect of anosmia induced with zinc sulphate at unfamiliar sites 30 km and 39 km from the loft, but treated birds were significantly poorer than controls at homing from an unfamiliar site 66 km distant (and in pooled results). In series 2, naive (untrained) birds, both control and zinc-sulphate-treated, showed poor homing abilities and initial orientation from sites 25 km, 36 km and 39 km from the loft. Nevertheless, in pooled results, controls showed significantly better homeward orientation than anosmic birds and were significantly more likely to home on the day of release. The most likely explanation for our results is that pigeons are able to use olfactory navigation in southern England, but that for some reason the olfactory map is relatively weak.

Journal Article↗

PubMed1998

Deceptive advertising of athletic footwear.

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Advertising↗

PubMed1997

Structural basis for cyclic terpene biosynthesis by tobacco 5-epi-aristolochene synthase.

Terpene cyclases catalyze the synthesis of cyclic terpenes with 10-, 15-, and 20-carbon acyclic isoprenoid diphosphates as substrates. Plants have been a source of these natural products by providing a homologous set of terpene synthases. The crystal structures of 5-epi-aristolochene synthase, a sesquiterpene cyclase from tobacco, alone and complexed separately with two farnesyl diphosphate analogs were analyzed. These structures reveal an unexpected enzymatic mechanism for the synthesis of the bicyclic product, 5-epi-aristolochene, and provide a basis for understanding the stereochemical selectivity displayed by other cyclases in the biosynthesis of pharmacologically important cyclic terpenes. As such, these structures provide templates for the engineering of novel terpene cyclases.

Alkyl and Aryl Transferases↗