Biomedical subjects

J Gomez

Publications and source records attributed to J Gomez.

At least 19 recordsLinked to original sources

PubMed2006

Simultaneous nitrification and p-cresol oxidation in a nitrifying sequencing batch reactor.

The tolerance, kinetic behavior and oxidizing ability of a nitrifying sludge exposed to different initial concentrations of p-cresol (25-150mg/l) were evaluated in a sequencing batch reactor (SBR) fed with 200mg NH(4)(+)-N/ld. The nitrifying SBR operated up to 300mg/ld of p-cresol, achieving simultaneously the complete ammonium oxidation to nitrate and the total consumption of p-cresol and its transitory intermediates from the culture. p-Cresol induced a significant decrease in the values for specific rates of ammonium consumption, showing that the ammonium oxidation pathway was mainly inhibited. After 7 months of operation in SBR, the specific rates of NH(4)(+)-N oxidation, NO(3)(-)-N formation, and total organic carbon consumption were 0.6g NH(4)(+)-N/g microbial protein-Nh, 0.3g NO(3)(-)-N/g microbial protein-Nh, and 0.24g total organic carbon/g microbial protein h, respectively. The microbial growth rate was always low (maximum value of 12.2+/-0.4mg protein-N/ld) and settleability of the sludge was good with sludge volume index values lower than 21ml/g. The oxidation of p-cresol and its intermediates was carried out faster throughout the cycles and nitrification inhibition decreased with the number of cycles.

Bioreactors↗

PubMed2006

Toluene mineralization by denitrification in an up flow anaerobic sludge blanket (UASB) reactor.

In order to examine the effect of easily degradable substrate such as acetate on toluene mineralization by denitrification, an upflow anaerobic sludge blanket (UASB) reactor in steady state was set up. The experimentation was carried out in two stages. Initially, the reactor was fed with a carbon loading rate of 250 mg acetate-C L-1 d-1 as electron source. Nitrate loading rate (mg ) was adjusted to obtain a constant C/N ratio of 1.4. In the second stage, five toluene-C loading rates (TLR, mg toluene-C L-1 d-1), 25, 50, 75, 100 and 125, were assessed while total carbon loading rate and C/N were maintained constant at 250 mg C L-1 d-1 and 1.4, respectively. In so doing, acetate-C loading rate (mg acetate-C L-1 d-1) was gradually substituted by toluene-C. When acetate-C was the only electron source a dissimilative denitrifying process resulted as indicated by bicarbonate yield YHCO3, mg produced/mg carbon consumed) of 0.74 +/- 0.005 and denitrifying yield (YN2, mg N2 produced/mg consumed) of 0.89 +/- 0.042. The addition of different TLR did not affect the biological process as consumption carbon efficiency (CCE) values remained up to 95% +/- 3.5 and YHCO3 and YN2 values were higher than 0.71 +/- 0.03 and 0.88 +/- 0.01, respectively. Toluene mineralization by denitrification in continuous culture was successfully achieved. A simple UASB denitrifying reactor system has promising applications for complete conversion of nitrate, toluene and acetate into N2 and CO2 with a minimal sludge production.

Acetates↗

PubMed2006

Kinetic and metabolic study of benzene, toluene and m-xylene in nitrifying batch cultures.

The effect of benzene, toluene, and m-xylene (BTX) compounds on the nitrifying activity of a sludge produced in steady-state nitrification was evaluated in batch cultures. Benzene and m-xylene at 10 mg C/L decreased ammonium consumption efficiency by 57% and 26%, respectively, whereas toluene did not affect the ammonium oxidation process. The consumed NH4+-N was totally oxidized to NO3- -N. There was no significant effect at 5 mg C/L of each aromatic compound. BTX (5-20mg C/L) induced a significant decrease in the values for specific rates of NH4+ -N consumption (76-99%) and NO3- -N production (45-98%). At 10 mg C/L of BTX compounds, the inhibition order on nitrate production was: benzene > m-xylene > toluene while at 20 mg C/L, the sequence changed to m-xylene > toluene > benzene for both nitrification inhibition and BTX compounds persistence. At 5 mg C/L of BTX compounds, there was no toxic effect on the sludge whereas from 10 to 50 mgC/L, bacteria did not totally recover their nitrifying activity. At a concentration of 5 mg C/L, toluene was first oxidized to benzyl alcohol, which was later oxidized to butyrate while m-xylene was oxidized to acetate and butyrate.

Benzene↗

PubMed2006

Management of child optic pathway gliomas: new therapeutical option.

OBJECTIVE: To present our experience in the treatment of child optic pathway gliomas in the last 25 years. MATERIAL AND METHODS: Seventeen children under 10 years of age have been analyzed and assessed from clinic, ophthalmologic, endocrinologic, neurological, neuropathologic, and imaginologic points of view. RESULTS: Predominance of female patients, 10 girls and 7 boys between 6 and 122 months old; mean age was 3 years and 8 months. The most frequent symptoms have been ophthalmologic and visual alterations in all 17 patients, endocrine alterations in 10, and neurological signs in 6. One of the patients presented neurofibromatosis type 1 (NF1), another patient had Down syndrome. Diagnosed using computed tomography or/and magnetic resonance imaging, histological studies showed pilocytic astrocytomas in 13 cases and a fibrillary astrocytoma grade II in 1 case. There were three patients without histological diagnosis; one of them had NF1. The treatment consisted of surgery, external beam radiotherapy, chemotherapy, and brachytherapy with iodine 125, separately or combined. Five patients died; the causes were secondary tumors in two children, tumor recurrence in one, sepsis secondary to respiratory and urinary tract infections in the child with Down syndrome, and finally, hydrocephaly due to hyperproteinorachia of tumor origin in one. Average survival was 89 months. CONCLUSION: Chemotherapy and brachytherapy are therapeutic methods to be considered, especially in children under 5. Marsupialization of the residual cyst into the ventricular system postradio or oncolytic treatment through endoscopic or stereotactic techniques is useful in the treatment of endocranial hypertension and/or hypothalamic compression in these patients.

Child↗

PubMed2006

Effects of wheat quality on digestion differ between the D+ and D- chicken lines selected for divergent digestion capacity.

The aim of the experiment was to study the effects of 2 wheat cultivars (Baltimor and Scipion) with different hardness values (75 and 5, respectively) on 2 divergent lines (D+ and D-) of broiler chickens selected on the basis of their digestion ability assessed by AME(n). Wheat was incorporated at 54.6% in diets. The other main ingredients were soybean meal (35.3%) and rapeseed oil (5.5%). Diets were given as pellets from 7 to 26 d. The experimental design was a 2 x 2 factorial design testing 2 wheat cultivars (soft or hard) on 2 selected lines of broiler chickens (high AME(n) or low AME(n)). From 7 to 16 d, D+ line showed lower (P < 0.0001) feed intake and feed:gain ratio than the D- line. At 3 wk of age, the D+ chickens resulted in increased digestibility values (P < 0.01) and 9% increased AME(n) value (P < 0.0001) compared with D-. Wheat cultivar effects on feed efficiency and AME(n) differed between lines. In the D+ line, their values were about 6% higher (P < 0.05) with soft than with hard wheat, whereas they did not differ in the D- line. However, wheat cultivar effect on starch digestibility did not differ between lines; soft instead of hard wheat resulted in about 6% improvement (P < 0.0001) in both lines. In the D- line, soft instead of hard wheat tended to reduce lipid and protein digestibilities, which explained why the starch digestibility improvement due to soft wheat was not converted into a significant AME(n) improvement in D birds. Study of digestive organ size revealed that increased proventriculus and gizzard weight (P < 0.05) could be one of the causes for the better digestion capacity of the D+ line. The pancreas was bigger (P < 0.01) in D- than in D+ birds, which probably came from an adaptation to a digestive disorder in D- birds.

Animal Feed↗

PubMed2006

Mathematical modelling of the anaerobic hybrid reactor.

This paper presents a new mathematical model for the anaerobic hybrid reactor (AHR) (a UASB reactor and an anaerobic filter in series) and its experimental calibration and verification. The model includes a biochemical part and a mass transport one, which considers the AHR as two contact reactors in series. The anaerobic process transformations are described by the model developed by Siegrist et al. The fraction (F) of solids in the clarification zone of the UASB reactor that leaves this first reactor is the key physical parameter to be estimated. The main parameters of the model were calibrated using experimental results from a bench-scale AHR fed with real slaughterhouse wastewater. The fraction of inert particulate COD in the influent and the factor F were estimated by a trial and error procedure comparing experimental and simulated results of the mass of solids in the lower tank and the VSS concentration in the AHR effluent. A good fit was obtained. The final verification was carried out by comparing a set of experiments with simulated data. The model's capability to predict the process performance was thus proved.

Anaerobiosis↗

PubMed2005

Does Helicobacter pylori have a pathogenic role in bronchiectasis?

AIM: To investigate the presence of Helicobacter pylori (H. pylori) in bronchial biopsies of patients with bronchiectasis, by histochemical and immunochemical staining. SETTING: 800-bed tertiary university hospital. METHODS: Observational study. PATIENTS: forty-six patients with bronchiectasis in a stable clinical condition and 8 control patients. INTERVENTIONS: Serum samples determination of IgG levels for H. pylori by ELISA. Immunostaining with an anti-H. pylori antibody (NCL-HPp, Novocastra) of bronchial mucosa obtained by fiberoptic bronchoscopy from both patients with bronchiectasis and controls. RESULTS: Twenty-one out of 46 patients with bronchiectasis (46%) had positive serology for H. pylori. We obtained 40 bronchial biopsies in patients with bronchiectasis and 8 bronchial biopsies in control patients. No evidence of H. pylori was obtained in the bronchial samples of both patients and controls. CONCLUSIONS: The results of our study could not demonstrate the presence of H. pylori in bronchial specimens from patients with bronchiectasis.

Adult↗

PubMed2005

Surveillance of transcriptomes in basic military trainees with normal, febrile respiratory illness, and convalescent phenotypes.

Gene expression profiles permit analysis of host immune response at the transcriptome level. We used the Pax gene Blood RNA (PAX) System and Affymetrix microarrays (HG-U133A&B) to survey profiles in basic military trainees and to classify them as healthy, febrile respiratory illness (FRI) without adenovirus, FRI with adenovirus, and convalescent from FRI with adenovirus. We assessed quality metrics of RNA processing for microarrays. Class prediction analysis discovered nested sets of transcripts that could categorize the phenotypes with optimized accuracy of 99% (nonfebrile vs febrile, P<0.0005), 87% (healthy vs convalescent, P=0.001), and 91% (febrile without vs with adenovirus, P<0.0005). The discovered set for classification of nonfebrile vs febrile patients consisted of 40 transcripts with functions related to interferon induced genes, complement cascades, and TNF and IL1 signaling. The set of seven transcripts for distinguishing healthy vs convalescent individuals included those associated with ribosomal structure, humoral immunity, and cell adhesion. The set of 10 transcripts for distinguishing FRI without vs with adenovirus had functions related to interferon induced genes, IL1 receptor accessory protein, and cell interactions. These results are the first in vivo demonstration of classification of infectious diseases via host signature transcripts and move us towards using the transcriptome in bio-surveillance.

Adenovirus Infections, Human↗

PubMed2005

Soft wheat instead of hard wheat in pelleted diets results in high starch digestibility in broiler chickens.

(1) The aim of the experiment was to re-examine variations in digestibilities of food components in 3-week-old broiler chickens fed on pelleted diets based on wheats differing in lipase activity and hardness. Fourteen wheat (Triticum aestivum) samples, each from a different cultivar, were included at 550 g/kg in 14 different diets given to male Ross broiler chicks from 7 d of age. The other main ingredients consisted of soyabean meal (353 g/kg) and rapeseed oil (55 g/kg). A 15th diet containing durum wheat (Triticum durum) was also tested. (2) Hardness of wheats (Triticum aestivum) varied between 14 (very soft) and 88 (very hard), and lipase activity of wheats varied from 1 to 13.1 (relative scale). No significant correlation was found between in vitro viscosities and other parameters such as hardness, particle size of wheat flours and lipase. Hardness was correlated with the mean particle size of wheat flours and durability of pellets. (3) Individual lipid digestibilities were negatively correlated with in vitro viscosities of wheats. (4) Individual starch digestibilities were negatively correlated with wheat hardness, particle size of wheat flour before pelleting, and pellet durability. The ratio of measured AME(N) to predicted AME(N) was also negatively correlated with wheat hardness. Simple regression calculation showed that a 100-point increase in wheat hardness resulted in a 3% decrease in the AME(N) value of diets. Multiple regression calculation showed the food/gain ratio (d 10 to d 21) to be positively related to wheat hardness and negatively related to pellet durability. (5) Wheat lipase activity was positively correlated with individual starch digestibility, which was the reverse of a result obtained in a previous experiment. Thus, wheat lipase activity did not seem consistent for predicting starch digestibility and AME(N) values. (6) Among all wheat samples, durum wheat showed the highest protein content and the lowest content of water-insoluble cell-wall. Starch digestibility of durum wheat tended to be lower than that of other wheats (0.916 vs 0.936). However, no significant difference in AME(N) was observed between the durum wheat sample and other wheats. (7) Gut morphometric data measured at d 24 did not show significant differences between dietary treatments.

Animal Feed↗

PubMed2005

Effects of food deprivation and particle size of ground wheat on digestibility of food components in broilers fed on a pelleted diet.

The first aim of the experiment was to study the effect of wheat (Triticum aestivum) particle size on the digestibility of starch in a pelleted diet given to broilers. The second aim was to study the consequences of food deprivation before the excreta collection period (from 21 to 24 d). Wheat from a strong hardness cultivar was incorporated at 546.1 g/kg in diets. The other main ingredients were soybean meal (353.5 g/kg) and rapeseed oil (55.0 g/kg). Diets were given as pellets. The experimental design was a 2 x 2 factorial design testing two particle sizes of wheat flour and two procedures of a balance experiment (with or without food deprivation). Birds given diet C (wheat coarse grinding before pelleting) had significantly greater gizzard weight than birds fed on diet F (wheat fine grinding before pelleting). Starch digestibility value was significantly increased when birds were fed on diet F. This effect was halved by food deprivation. No significant effect of grain particle size was observed for protein and lipid digestibility values. However, food deprivation decreased apparent protein digestibility, with an effect which was more pronounced for fine than for coarse grinding. AMEN of the diet was significantly improved by fine grinding of wheat and decreased by food deprivation. However, no significant differences in growth performance were induced by differences in wheat grinding. No significant effect of grinding was observed on the water excretion:feed intake ratio. No significant difference was observed for vent score between treatments. There was over-excretion of starch in the first hours of refeeding following food deprivation.

Animal Feed↗

PubMed2005

[West Nile virus infection: serological investigation among horses in France and in Africa].

This study was carried out in 2003 to detected serological evidence of West Nile virus infection in 190 Army horses kept nearby French troops stationed in Southeast France and in Africa (Chad, Côte d'Ivoire and Senegal). Both IgG and IgM antibodies were searched for using an ELISA assay. Specifiity of IgG antibodies was determined by western blot and plaque reduction seroneutraization. Finding showed that 79% of the Army horses (n=96) tested in Africa presented specific IgG antibodies. All horses that were seropositive for IgG were seronegative for IgM. None of the Army horses (n=94) tested in the Southeast France were seropositive for West Nile virus. This study indicates that West Nile virus has circulated in all three African countries but not recently. It also underscores the value of western blotting as a rapid, specific confirmation technique that could eliminate the need to use plaque reduction seroneutralization.

Africa↗

PubMed2004

Measurement of the generalized forward spin polarizabilities of the neutron.

The generalized forward spin polarizabilities gamma(0) and delta(LT) of the neutron have been extracted for the first time in a Q2 range from 0.1 to 0.9 GeV2. Since gamma(0) is sensitive to nucleon resonances and delta(LT) is insensitive to the Delta resonance, it is expected that the pair of forward spin polarizabilities should provide benchmark tests of the current understanding of the chiral dynamics of QCD. The new results on delta(LT) show significant disagreement with chiral perturbation theory calculations, while the data for gamma(0) at low Q2 are in good agreement with a next-to-leading-order relativistic baryon chiral perturbation theory calculation. The data show good agreement with the phenomenological MAID model.

Journal Article↗

PubMed2004

Molecular characterization of the first isolation of rotavirus in guanacos (Lama guanicoe).

Rotaviruses (RVs) are a major cause of neonatal diarrhoea in humans and numerous animal species. We report G-type, P-type and phylogenetic analysis of two RV strains isolated from newborn guanacos (Lama guanicoe) with acute diarrhoea in Argentina. Isolates were group A G8 RV. Phylogenetic analysis showed a close relationship to other G8 bovine RV from Japan, U.S.A. and Switzerland. P-types were P[1] and an unusual P[14], related to human and goat P[14] strains. This is the first report of a P[14]G8 strain in our country and the first study on molecular epidemiology of rotavirus found in a new species.

Animals↗

PubMed2004

Measurement of the generalized polarizabilities of the proton in virtual Compton scattering at Q2=0.92 and 1.76 GeV2.

We report a virtual Compton scattering study of the proton at low c.m. energies. We have determined the structure functions P(LL)-P(TT)/epsilon and P(LT), and the electric and magnetic generalized polarizabilities (GPs) alpha(E)(Q2) and beta(M)(Q2) at momentum transfer Q(2)=0.92 and 1.76 GeV2. The electric GP shows a strong falloff with Q2, and its global behavior does not follow a simple dipole form. The magnetic GP shows a rise and then a falloff; this can be interpreted as the dominance of a long-distance diamagnetic pion cloud at low Q2, compensated at higher Q2 by a paramagnetic contribution from piN intermediate states.

Journal Article↗

PubMed2004

Phase II and pharmacokinetic study of ecteinascidin 743 in patients with progressive sarcomas of soft tissues refractory to chemotherapy.

PURPOSE: To assess the efficacy of the marine-derived alkaloid ecteinascidin 743 (ET-743) in patients with soft tissue sarcomas that progressed despite prior conventional chemotherapy and to characterize the pharmacokinetic profiles of ET-743 in this patient population. PATIENTS AND METHODS: Thirty-six previously treated soft tissue sarcoma patients from three institutions received ET-743 as a 24-hour continuous intravenous (IV) infusion at a dose of 1,500 microg/m(2) every 3 weeks. Pharmacokinetic studies were also performed. Patients were restaged every two cycles for response by objective criteria. RESULTS: Objective responses were observed in three patients, with one complete response and two partial responses, for an overall response rate of 8% (95% CI, 2% to 23%). Responses were durable for up to 20 months. Two minor responses (43% and 47% tumor reduction) were observed, for an overall clinical benefit rate of 14%. The predominant toxicities were neutropenia and self-limited transaminitis of grade 3 to 4 severity in 34% and 26% of patients, respectively. The estimated 1-year time to progression and overall survival rates were 9% (95% CI, 3% to 27%) and 53% (95% CI, 39% to 73%), respectively. The maximum observed plasma concentration and total plasma clearance of ET-743 (mean +/- standard deviation), 1.04 +/- 0.48 ng/mL and 35.6 +/- 16.2 L/h/m(2), respectively, were consistent with previously reported values from phase I studies of the drug given as a 24-hour IV infusion. CONCLUSION: ET-743 is a promising new option for the management of several histologic subtypes of sarcoma. Durable objective responses were obtained in a subset of sarcoma patients with disease progression despite prior chemotherapy. Additionally, the relatively high survival rate noted in this series of previously treated patients further justifies development of this agent.

Adult↗

PubMed2004

Q2 evolution of the neutron spin structure moments using a 3He target.

We have measured the spin structure functions g(1) and g(2) of 3He in a double-spin experiment by inclusively scattering polarized electrons at energies ranging from 0.862 to 5.058 GeV off a polarized 3He target at a 15.5 degrees scattering angle. Excitation energies covered the resonance and the onset of the deep inelastic regions. We have determined for the first time the Q2 evolution of Gamma(1)(Q2)= integral (1)(0)g(1)(x,Q2)dx, Gamma(2)(Q2)= integral (1)(0)g(2)(x,Q2)dx, and d(2)(Q2)= integral (1)(0)x(2)[2g(1)(x,Q2)+3g(2)(x,Q2)]dx for the neutron in the range 0.1< or =Q2< or =0.9 GeV2 with good precision. Gamma(1)(Q2) displays a smooth variation from high to low Q2. The Burkhardt-Cottingham sum rule holds within uncertainties and d(2) is nonzero over the measured range.

Journal Article↗

PubMed2004

Precision measurement of the neutron spin asymmetryA(n)(1) and spin-flavor decomposition in the valence quark region.

We have measured the neutron spin asymmetry A(n)(1) with high precision at three kinematics in the deep inelastic region at x=0.33, 0.47, and 0.60, and Q(2)=2.7, 3.5, and 4.8 (GeV/c)(2), respectively. Our results unambiguously show, for the first time, that A(n)(1) crosses zero around x=0.47 and becomes significantly positive at x=0.60. Combined with the world proton data, polarized quark distributions were extracted. Our results, in general, agree with relativistic constituent quark models and with perturbative quantum chromodynamics (PQCD) analyses based on the earlier data. However they deviate from PQCD predictions based on hadron helicity conservation.

Journal Article↗

PubMed2004

Heritability of digestibilities and divergent selection for digestion ability in growing chicks fed a wheat diet.

The genetic parameters of digestibilities for a wheat-based diet were estimated on 864 broilers. Two divergent lines (D+ and D-) were developed based on AMEn. The Rialto wheat variety was used as it is known to result in low digestibility values. Digestibility of lipids (DL), starch (DS), and proteins (DP) were measured individually using Near Infrared (NIR) analysis of freeze-dried excreta. Body weight, feed consumption (FC), feed conversion ratio (FCR) and residual feed consumption (RES) were recorded to evaluate their correlation with AMEn. The mean AMEn value was 3,093 kcal/kg DM (CV = 9.0%), with a range of 1,001 to 4,022 kcal/kg DM, and was highly heritable (0.36 to 0.38) based on the Restricted Maximum Likelihood method. Genetic correlations with BW were low (-0.10 to -0.15). Selection for AMEn can thus be performed without modifying BW. In contrast, the estimated genetic correlations between AMEn and the other traits were highly negative (-0.53 to -0.60 for FC, -0.77 to -0.80 for RES, and -0.77 to -0.84 for FCR). Finally, digestibilities of feed components were moderately to highly heritable (0.33 to 0.47) and highly correlated with AMEn (0.91 for DL, 0.83 for DS, and 0.86 for DP). Selecting for improved AMEn should thus improve digestibility of proteins, starch, and lipids. The first generation of divergent selection on AMEn confirmed these results, D+ and D- lines showing a 13% difference in AMEn (P < 0.0001) and similar BW.

Animals↗