PubMed Health⌕ Search

Biomedical subjects

J Hommez

Publications and source records attributed to J Hommez.

At least 37 records · Page 2Linked to original sources

Ornithobacterium rhinotracheale gen. nov., sp. nov., isolated from the avian respiratory tract.

The phylogenetic position and various genotypic, chemotaxonomic, and classical phenotypic characteristics of 21 gram-negative avian isolates were studied. These strains constitute a genotypically homogeneous taxon in rRNA superfamily V, as shown by DNA-rRNA hybridization data. Determination of the 16S rRNA sequence of this taxon revealed its detailed position within the "flavobacter" subgroup of the "flavobacter-bacteroides" phylum as described by Gherna and Woese (R. Gherna and C. R. Woese, Syst. Appl. Microbiol. 15:513-521, 1992). This new taxon is only distantly related to other members of the "flavobacter-bacteroides" phylum and is therefore given separate generic status. The DNA-DNA binding values for members of this taxon, for which we propose the name Ornithobacterium rhinotracheale, confirmed that all of the strains are highly interrelated (DNA-DNA binding values greater than 90% were measured). The G+C contents of members of this taxon are between 37 and 39 mol%. An analysis of the cellular proteins and fatty acids and classical phenotypic characteristics allowed us to distinguish O. rhinotracheale from phenotypically similar taxa, such as Riemerella anatipestifer and Capnocytophaga species. The respiratory quinone content (menaquinone 7) and carbohydrate pattern of O. rhinotracheale conform with the respiratory quinone contents and carbohydrate patterns of other members of rRNA superfamily V.

Animals↗

Identification and composition of the streptococcal and enterococcal flora of tonsils, intestines and faeces of pigs.

Streptococcus suis was the most frequent Streptococcus spp. in pig tonsils, followed by the beta-haemolytic porcine 'equisimilis' ecovar of Strep. dysgalactiae. The intestinal streptococcal flora was composed of Strep. bovis, Strep. hyointestinalis and Strep. suis. Many of these intestinal Strep. suis belonged to a beta-glucuronidase-negative biotype which is infrequent in lesions. Nearly half of the strains presumptively identified as Strep. alactolyticus produced acid from lactose. This species was not found in tonsils and intestines but was about equally prevalent as Strep. hyointestinalis in pig faeces and rectal swabs. Other streptococci were rare in this material. Enterococci were much less frequently identified than streptococci in tonsils and faeces. In intestinal samples Enterococcus faecalis, Ent. faecium, Ent. hirae and Ent. cecorum were most frequently found. In faeces Ent. faecium was the most prevalent enterococcus. The characteristics of the less well known species Strep. alactolyticus and Strep. hyointestinalis are described in detail, and guidelines for their differentiation from Strep. bovis and Strep. suis given.

Animals↗

Characterization and identification of Vagococcus fluvialis strains isolated from domestic animals.

Strains of Vagococcus fluvialis, a species of Gram-positive catalase-negative cocci, related to the genera Enterococcus and Carnobacterium, were isolated from various lesions of pigs, from lesions and tonsils of cattle and cats and from tonsils of a horse. Most lesion strains were isolated in mixed culture from animals with disease conditions unrelated to coccal infection. Certain differences with the species description of Vagococcus fluvialis were found: only a proportion of the strains was motile; many strains gave positive reactions to Voges-Proskauer, alkaline phosphatase and leucine arylamidase tests or produced acid from galactose and D-tagatose. SDS-PAGE of whole-cell protein patterns, however, confirmed the phenotypic identification. Guidelines for identification of Vagococcus fluvialis are given and an emended description of the species is proposed.

Animals↗

Flavobacterium meningosepticum, a pathogen in birds.

Five bacterial isolates were recovered from various diseased birds (chickens, a pigeon, and a zebra finch) and were identified as Flavobacterium meningosepticum. Four of them were isolated in pure or nearly pure culture of samples from internal organs, and one strain was isolated in mixed culture of a tarsal joint fluid sample. Except for the last case, there was no evidence of other disease agents. By using phenotypic, chemotaxonomic, and genomic methods, the strains were taxonomically characterized and could not be differentiated from the human clinical reference strains of the species. Two avian strains were different in their phenotypic behaviors and constituted another genotypic subgroup. In general, all F. meningosepticum strains constituted a single species which was easily differentiated from biochemically similar species and phylogenetically closely related taxa.

Animals↗

Molecular taxonomic studies of Actinomyces-like bacteria isolated from purulent lesions in pigs and description of Actinomyces hyovaginalis sp. nov.

The 16S rRNA gene sequence of some Actinomyces-like bacteria isolated from purulent lesions in pigs was determined. A comparative analysis of the rRNA sequence data revealed that the bacteria are members of the genus Actinomyces, but are phylogenetically distinct from Actinomyces suis. On the basis of our findings and the results of previous phenotypic studies it is formally proposed that the bacteria from pigs should be designated a new species, Actinomyces hyovaginalis.

Actinomyces↗

In vitro susceptibility of Clostridium perfringens isolated from farm animals to growth-enhancing antibiotics.

Minimal inhibitory concentration (MIC) determinations were carried out with seven growth-enhancing antibiotics against 95 Clostridium perfringens field isolates obtained during 1991 and 1992 from poultry, pigs and calves. All were resistant to 64 micrograms ml-1 of the bambermycin antibiotic, flavomycin (flavophospholipol) and susceptible to avoparcin (MIC90 0.25 micrograms ml-1), avilamycin (MIC90 0.5 micrograms ml-1) and salinomycin (MIC90 < or = 0.12 micrograms ml-1). Acquired resistance against bacitracin was detected in some isolates from poultry and bovines and resistance to tylosin and virginiamycin in some strains from all species investigated. Overall, the prevalence of resistance was comparable to the low levels recorded in 1979 in Cl. perfringens isolates from the same animal host species.

Animals↗

Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens.

The relationships of 77 aerotolerant Arcobacter strains that were originally identified as Campylobacter cryaerophila (now Arcobacter cryaerophilus [P. Vandamme, E. Falsen, R. Rossau, B. Hoste, P. Segers, R. Tytgat, and J. De Ley, Int. J. Syst. Bacteriol. 41:88-103, 1991]) and 6 reference strains belonging to the taxa Arcobacter nitrofigilis, Arcobacter cryaerophilus, and "Campylobacter butzleri" were studied by using a polyphasic approach, in which we performed DNA-rRNA hybridizations, DNA-DNA hybridizations, a numerical analysis of whole-cell protein patterns after sodium dodecyl sulfate-polyacrylamide gel electrophoresis, an analysis of cellular fatty acid compositions, and a phenotypic analysis and determined DNA base ratios. Our results indicate that "C. butzleri" should be transferred to the genus Arcobacter as Arcobacter butzleri comb. nov., as was suggested by Kiehlbauch and coworkers (J. A. Kiehlbauch, D. J. Brenner, M. A. Nicholson, C. N. Baker, C. M. Patton, A. G. Steigerwalt, and I. K. Wachsmuth, J. Clin. Microbiol. 29:376-385, 1991). A rapid screening of all strains in which we used the sodium dodecyl sulfate-polyacrylamide gel electrophoresis technique revealed five major groups, which were identified by using DNA-DNA hybridization data as A. cryaerophilus (two distinct electrophoretic subgroups), A. butzleri, A. nitrofigilis, and a new species, for which we propose the name Arcobacter skirrowii. The phylogenetic position within rRNA superfamily VI was established for each species. A. butzleri strains and strains belonging to one of the electrophoretic subgroups of A. cryaerophilus had similar fatty acid contents. An analysis of fatty acid compositions allowed clear-cut differentiation of all of the other groups. All of the species could be distinguished by using classical phenotypic tests, although erroneous identifications due to a shortage of clear-cut differentiating tests could occur.

Animals↗

Characteristics of different Streptococcus suis ecovars and description of a simplified identification method.

Streptococcus suis strains associated with different animal hosts or located in different body regions constitute special ecovars of S. suis. A group of CO2-dependent strains which showed several unusual traits was found in the genital tract of swine, and mannitol- and sorbitol-fermenting strains were isolated from sheep, cattle and horses. S. suis was found to be biochemically more heterogenous than originally described. A detailed description is given of additional characteristics of the species as well as of characters which should be modified in the species description. A simple scheme which uses the amylase and the Voges-Proskauer (acetoin) reactions for the identification of S. suis is proposed. All S. suis strains tested produced a characteristic amylase reaction on Mueller-Hinton plates or on Columbia Agar Base enriched with starch.

Animals↗

Bèta-hemolytic streptococci from pigs: bacteriological diagnosis.

Bèta-hemolytic streptococci from lesions in pigs were identified as S. dysgalactiae biotype "equisimilis" and S. dysgalactiae serovar L, S. porcinus, S. agalactiae, E. faecalis and CO2 dependent and broad bèta-hemolytic S. suis. Data are provided which can be used in the interpretation of commercial identification systems. Tests results and physiological characteristics which complete identification procedures using coagglutination tests are proposed and discussed.

Animals↗

Characterization of 2 groups of Actinomyces-like bacteria isolated from purulent lesions in pigs.

Two groups of Actinomyces-like bacteria isolated from purulent lesions in pigs, were characterized and compared with Actinomyces pyogenes of porcine origin. One group showed characteristics which differed in many respects from A. pyogenes but which corresponded more closely to those of the non-official species 'Actinomyces suis'. Certain carbohydrate reactions differed from those given in earlier descriptions. This group was isolated only from purulent vaginal discharge and aborted foeti. The other group resembled the 'A. suis'-like bacteria but differed in its colony morphology, hippurate and to some extent also in its cellobiose and gluconate reactions and in its habitat. It was concluded that 'A. suis' may occur in lesions other than mammary actinomycosis in areas where this disease is extremely rare, and that its natural habitat is the genital tract of pigs. Furthermore a probably related group exists, which is found in purulent lesions located mainly outside the porcine genital tract. These organisms appear to be as frequent in these types of lesions as A. pyogenes, with whom they can easily be confused in routine diagnostic bacteriology.

Actinomyces↗

Taxon 20 (Fam. Pasteurellaceae) infections in European brown hares (Lepus europaeus).

Hemolytic bacteria, phenotypically related to organisms previously identified as Pasteurella haemolytica and tentatively named Taxon 20, were isolated from cases of purulent bronchopneumonia and from conjunctivitis in European brown hares (Lepus europaeus). The bronchopneumonia, sometimes accompanied by lesions in other organs, occurred without other concomitant disease. The conjunctivitis was found mainly in animals suffering from the European brown hare syndrome.

Animals↗

Composition of the enterococcal and streptococcal intestinal flora of poultry.

Identification to species level showed that Enterococcus faecalis and Ent. faecium largely dominated the enterococcal and streptococcal gut flora of 1-d-old chicks. Enterococcus faecalis was rare in 3- to 5-week-old broilers. Two species, Ent. faecium and Streptococcus alactolyticus, were isolated from nearly all broilers examined. Enterococcus hirae and Ent. durans were found in the small intestines of this category of poultry. In layers and parent stock of over 12 weeks of age, Ent. cecorum dominated with Strep. alactolyticus ranking next. Other species were isolated irregularly. Enterococcus avium and Ent. gallinarum, originally described from chickens, were rarely found. These species did not appear to belong to the normal intestinal flora of poultry.

Animals↗

Slide precipitation: a simple method to type Actinobacillus (Haemophilus) pleuropneumoniae.

Soluble thermostable antigens prepared from Actinobacillus pleuropneumoniae, as commonly applied in the ring precipitation test, were used in rapid slide tests. This method was easier to perform than the ring precipitation test and showed the same specificity. This specificity was higher than that obtained in slide agglutination tests using whole bacterial cells.

Actinobacillus↗

Identification and characterization of Streptococcus suis.

A total of 188 Streptococcus suis strains isolated from pigs with various lesions, mainly bronchopneumonia, were identified using classical biochemical methods and using the API 20 STREP system. The serological classification was performed by precipitation reactions after Lancefield extraction, slide-coagglutinations and capsular reaction tests. Fifty-nine strains belonged to Types 1, 1/2 or 2, 78 strains to Types 3-8 and 51 strains were non-typable. The results of the different tests and the biochemical differences between the different serotypes are discussed.

Animals↗

Epidemiology of methicillin-resistant Staphylococcus aureus in dairy herds.

Sixty-eight methicillin-resistant Staphylococcus aureus strains were isolated from mastitis milk samples originating from 20 Belgian dairyherds. All these strains appeared to be representatives of one single strain which was probably of human origin. Evidence is presented indicating a rapid in vivo evolutionary change in this strain. The following characteristics were found to be variable: the production of beta haemolysin inversely connected with fibrinolysin (staphylokinase) activity; the production of lipase, enterotoxin B and delta haemolysin; the resistance to neomycin, chloramphenicol, tetracyclines, methicillin and spectinomycin associated with constitutive or inducible macrolide resistance.

Animals↗