Biomedical subjects

J Knoester

Publications and source records attributed to J Knoester.

18 recordsLinked to original sources

PubMed2006

Temperature-dependent relaxation of excitons in tubular molecular aggregates: Fluorescence decay and stokes shift.

We report temperature-dependent steady-state and time-resolved fluorescence studies to probe the exciton dynamics in double-wall tubular J-aggregates formed by self-assembly of the dye 3,3'-bis(3-sulfopropyl)-5,5',6,6'-tetrachloro-1,1'-dioctylbenzimidacarbocyanine. We focus on the lowest energy fluorescence band, originating from the inner cylindrical wall. At low temperatures, the experiments reveal a nonexponential decay of the fluorescence, with a typical time scale that depends on the emission wavelength. At these temperatures we also find a dynamic Stokes shift of the fluorescence spectrum and its nonmonotonic dependence on temperature under steady-state conditions. All these data indicate that below about 20 K the excitons in the lowest fluorescence band do not reach thermal equilibrium before emission occurs, while above about 60 K thermalization on this time scale is complete. By comparing the two lowest fluorescence bands, we also find indications for fast energy transfer from the outer to the inner wall. We show that the Frenkel exciton model with diagonal disorder, which previously has been proposed to explain the absorption and linear dichroism spectra of these aggregates, yields a quantitative explanation to the observed dynamics. To this end, we extend the model to account for weak phonon-induced scattering of the localized exciton states; the spectral dynamics are then described by solving a Pauli master equation for the exciton populations.

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PubMed2006

Excitation energy transfer between closely spaced multichromophoric systems: effects of band mixing and intraband relaxation.

We theoretically analyze the excitation energy transfer between two closely spaced linear molecular J-aggregates, whose excited states are Frenkel excitons. The aggregate with the higher (lower) exciton band edge energy is considered as the donor (acceptor). The celebrated theory of Förster resonance energy transfer (FRET), which relates the transfer rate to the overlap integral of optical spectra, fails in this situation. We point out that, in addition to the well-known fact that the point-dipole approximation breaks down (enabling energy transfer between optically forbidden states), also the perturbative treatment of the electronic interactions between donor and acceptor system, which underlies the Förster approach, in general loses its validity due to overlap of the exciton bands. We therefore propose a nonperturbative method, in which donor and acceptor bands are mixed and the energy transfer is described in terms of a phonon-assisted energy relaxation process between the two new (renormalized) bands. The validity of the conventional perturbative approach is investigated by comparing to the nonperturbative one; in general, this validity improves for lower temperature and larger distances (weaker interactions) between the aggregates. We also demonstrate that the interference between intraband relaxation and energy transfer renders the proper definition of the transfer rate and its evaluation from experiment a complicated issue that involves the initial excitation condition. Our results suggest that the best way of determining this transfer rate between two J-aggregates is to measure the fluorescence kinetics of the acceptor J-band after resonant excitation of the donor J-band.

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PubMed2006

Mode softening, ferroelectric transition, and tunable photonic band structures in a point-dipole crystal.

We study the photonic band structure of cubic crystals of point dipoles. It is shown that in contrast to earlier claims these systems cannot have an omnidirectional photonic band gap. For sufficiently large plasma frequencies, however, they exhibit softening of photonic bands, leading to (anti)ferroelectric ordering of the dipoles and the possibility to open and tune directional band gaps by external electric fields. The model studied may be realized through lattices of quantum dots.

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PubMed2005

Decoherence of excitons in multichromophore systems: thermal line broadening and destruction of superradiant emission.

We study the temperature-dependent dephasing rate of excitons in chains of chromophores, accounting for scattering on static disorder as well as acoustic phonons in the host matrix. From this we find a power-law temperature dependence of the absorption linewidth, in excellent quantitative agreement with experiments on dye aggregates. We also propose a relation between the linewidth and the exciton coherence length imposed by the phonons. The results indicate that the much debated steep rise of the fluorescence lifetime of pseudoisocyanine aggregates above 40 K results from the fact that this coherence length drops below the localization length imposed by static disorder.

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PubMed2005

Thermal broadening of the J-band in disordered linear molecular aggregates: a theoretical study.

We theoretically study the temperature dependence of the J-band width in disordered linear molecular aggregates, caused by dephasing of the exciton states due to scattering on vibrations of the host matrix. In particular, we consider inelastic one- and two-phonon scatterings between different exciton states (energy-relaxation-induced dephasing), as well as the elastic two-phonon scattering of the excitons (pure dephasing). The exciton states follow from numerical diagonalization of a Frenkel exciton Hamiltonian with diagonal disorder; the scattering rates between them are obtained using the Fermi golden rule. A Debye-type model for the one- and two-phonon spectral densities is used in the calculations. We find that, owing to the disorder, the dephasing rates of the individual exciton states are distributed over a wide range of values. We also demonstrate that the dominant channel of two-phonon scattering is not the elastic one, as is often tacitly assumed, but rather comes from a similar two-phonon inelastic scattering process. In order to study the temperature dependence of the J-band width, we simulate the absorption spectrum, accounting for the dephasing-induced broadening of the exciton states. We find a power-law (T(p)) temperature scaling of the effective homogeneous width, with an exponent p that depends on the shape of the spectral density of the host vibrations. In particular, for a Debye model of vibrations, we find p approximately 4, which is in good agreement with the experimental data on J aggregates of pseudoisocyanine [I. Renge and U. P. Wild, J. Phys. Chem. A, 101, 7977 (1997)].

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PubMed2004

Low-temperature dynamics of weakly localized Frenkel excitons in disordered linear chains.

We calculate the temperature dependence of the fluorescence Stokes shift and the fluorescence decay time in linear Frenkel exciton systems resulting from the thermal redistribution of exciton population over the band states. The following factors, relevant to common experimental conditions, are accounted for in our kinetic model: (weak) localization of the exciton states by static disorder, coupling of the localized excitons to vibrations in the host medium, a possible nonequilibrium of the subsystem of localized Frenkel excitons on the time scale of the emission process, and different excitation conditions (resonant or nonresonant). A Pauli master equation, with microscopically calculated transition rates, is used to describe the redistribution of the exciton population over the manifold of localized exciton states. We find a counterintuitive nonmonotonic temperature dependence of the Stokes shift. In addition, we show that depending on experimental conditions, the observed fluorescence decay time may be determined by vibration-induced intraband relaxation, rather than radiative relaxation to the ground state. The model considered has relevance to a wide variety of materials, such as linear molecular aggregates, conjugated polymers, and polysilanes.

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PubMed2003

Temperature dependent fluorescence in disordered Frenkel chains: interplay of equilibration and local band-edge level structure.

We model the optical dynamics in linear Frenkel exciton systems governed by scattering on static disorder and lattice vibrations and calculate the temperature dependent fluorescence spectrum and lifetime. The fluorescence Stokes shift shows a nonmonotonic behavior with temperature, which derives from the interplay of the local band-edge level structure and thermal equilibration. The model yields excellent fits to experiments performed on linear dye aggregates.

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PubMed2003

Frustrated spin model as a hard-sphere liquid.

We show that one-dimensional topological objects (kinks) are natural degrees of freedom for an antiferromagnetic Ising model on a triangular lattice. Its ground states and the coexistence of spin ordering with an extensive zero-temperature entropy can easily be understood in terms of kinks forming a hard-sphere liquid. Using this picture we explain effects of quantum spin dynamics on that frustrated model, which we also study numerically.

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PubMed2001

Peierls transition with acoustic phonons and solitwistons in carbon nanotubes.

We show that the Peierls instability can result in softening of acoustic phonons with small wave vectors and suggest that this unusual transition takes place in carbon nanotubes, resulting in a static twist deformation of the nanotube lattice. The topological excitations in the ordered phase are immobile and propagate only in pairs.

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PubMed1996