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Biomedical subjects

J M Travere

Publications and source records attributed to J M Travere.

6 recordsLinked to original sources

B-SPID: an object-relational database architecture to store, retrieve, and manipulate neuroimaging data.

We propose a hardware and software architecture to respond to crucial problems in the neuroimaging field: storage, retrieval, and processing of large datasets. The B-SPID project, here discussed, concerns the processing of neuroimages and attached components stored in an object-relational multimedia database management system (DBMS). Advanced bioinformation concepts are exploited in this project such as large scale data storage, high level graphical user interfaces and 3D graphical processing and display of data. Our database implementation is based on standard programming components, runs on several UNIX platforms and is written to be evolutive. Queries on this database are designed to obtain and display from neuroimaging data several types of results (pictures, text, or 3D graphical shapes) on heterogeneous systems.

Brain Mapping↗

A review of database management systems suitable for neuroimaging.

This study comprises a technical assessment of Database Management Systems (DBMS), which may be of use in the analysis of data obtained from human brain mapping procedures. Due to the large expansion of the neuroimaging field, the use of specialized database software to store and process neuroimages and their attached components is inevitable. The advent of multiple software products, a wealth of technical terms and a wide variety of other applications make the choice of a suitable program sometimes difficult. Through the inclusion of some basic and pertinent criteria (e.g., performance, ease of opening, standardization and portability), we present a descriptive comparison of 12 DBMSs currently available in the commercial and public domain. We have compared and tested three main architecture models which are currently available and assessed their potential applications for imaging purposes: relational, object-oriented, and hybrid. The findings of our study demonstrated that the Illustra software was the best suited for a neuroimaging environment because of its intrinsic ability to handle complex and large objects, such as 3D volumes or geometric structures.

Brain Mapping↗

Agraphia in Alzheimer's disease: an independent lexical impairment.

This study was conducted to delineate the pattern of the writing impairments in 12 patients with Alzheimer type dementia. The patients performed writing tasks involving regular and irregular words and nonwords given by dictation as well as a decision test composed of printed words and pictures requiring phonologic, lexical, and semantic processing. Writing from dictation demonstrated a predominant, but nonisolated, lexical deficit. In order to better evaluate this lexical disorder, the correlation between the dictation writing scores and the decision task scores was analyzed. No significant correlation was found among scores for irregular words, phonologically plausible errors, and scores of the lexical or semantic decision tasks, but there was a significant correlation among scores for the nonwords, nonphonological spelling errors, and scores of the phonologic decision task using printed words. These results would suggest that the "lexical" deficit in agraphia, i.e., difficulty in retrieval or loss of the spelling representations of words, is independent of the lexical or semantic capacities involved in other modalities.

Aged↗

A voxel-based method for the statistical analysis of gray and white matter density applied to schizophrenia.

We describe a novel technique for characterizing regional cerebral gray and white matter differences in structural magnetic resonance images by the application of methods derived from functional imaging. The technique involves automatic scalp-editing of images followed by segmentation, smoothing, and spatial normalization to a symmetrical template brain in stereotactic Talairach space. The basic idea is (i) to convert structural magnetic resonance image data into spatially normalized images of gray (or white) matter density, effected by segmenting the images and smoothing, and then (ii) to use Statistical Parametric Mapping to make inferences about the relationship between gray (or white) matter density and symptoms (or other pathophysiological measures) in a regionally specific fashion. Because the whole brain sum of gray (or white) matter indices is treated as a confound, the analysis reduces to a characterization of relative gray (or white) matter density on a voxel by voxel basis. We suggest that this is a powerful approach to voxel-based statistical anatomy. Using the technique, we constructed maps of the regional cerebral gray and white matter density correlates of syndrome scores (distinct psychotic symptoms) in a group of 15 schizophrenic patients. There was a negative correlation between the score for the reality distortion syndrome and regional gray matter density in the left superior temporal lobe (P = 0.01) and regional white matter density in the corpus callosum (P < 0.001). These abnormalities may be associated with functional changes predisposing to auditory hallucinations and delusions. This method permits the detection of structural differences within the entire brain (as opposed to selected regions of interest) and may be of value in the investigation of structural gray and white matter abnormalities in a variety of brain diseases.

Adult↗

VoxeLine: a software program for 3D real-time visualization of biomedical images.

The architecture and implementation of VoxeLine, a new interactive environment for display and analysis of 2D and 3D images in real-time, is discussed. This modular software project comprises two main parts: a user part (without programming expertise) and a programming part which permits its adaptation to specific problems. VoxeLine has the ability to deal with almost all sorts of data types encountered in the biomedical field (e.g. images, vectors). Another important feature is its ability to show datasets in all directions without duplicating data into the main memory. This feature allows VoxeLine to be used on machines with limited memory capacities and power. Real-time 3D manipulations (10 Hz for a 256 x 256 x 124 MRI dataset) are possible on a classic monoprocessor architecture such as a personal computer.

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