Biomedical subjects

James R Gardinier

Publications and source records attributed to James R Gardinier.

14 recordsLinked to original sources

PubMed2006

Janus scorpionates: supramolecular tectons for the directed assembly of hard-soft alkali metallopolymer chains.

A new scorpionate ligand [HB(mtda)3-] containing mercaptothiadiazolyl (mtda) heterocyclic rings with both hard nitrogen donors and soft sulfur donors has been prepared. This new ligand, the Janus scorpionate, is a hybrid of a tris(pyrazolyl)borate and a tris(mercaptoimidazolyl)borate. The differential hard/soft character of the dissimilar donor groups in this bridging ligand was exploited for the controlled solid-state organization of homometallic and heterometallic alkali metal coordination polymers. Remarkably, in the case of sodium, coordination polymers with both acentric (with NaS3N3H kernels) and centric (with alternating NaN6 and NaS6H2 kernels) chains are found in the same crystal (where the centricity is defined by the relative orientations of the B-H bonds of the ligands along the lattice). For the homometallic potassium congener, the larger cation size, compared to sodium, induced significant distortions and favored a polar arrangement of ligands in the resulting coordination polymer chain. An examination of the solid-state structure of the mixed alkali metal salt system revealed that synergistic binding of smaller sodium cations to the nitrogen portion and of the larger potassium cations to the sulfur portion of the ligand minimizes the ligand distortions relative to the homometallic coordination polymer counterparts, a design feature of the ligand that likely assists in thermodynamically driving the self-assembly of the heterometallic chains. The effect of alkali metal complexation on the solution properties of the ligand was studied by comparing NMR chemical shifts, B-H stretching frequencies, and electrochemical properties with those of the noncoordinating tetrabutylammonium salt of the scorpionate. The similarity of these data regardless of cation indicates that the salts are likely dissociated in solution rather than maintaining their solid-state polymeric structures. This data is augmented by the ESI(+/-) mass spectral data for a series of mixed alkali metal tris(mercaptothiadiazolyl)borates that also indicate that dissociation occurs in solution.

Journal Article↗

PubMed2006

Metallacycles of iron, zinc, and cadmium assembled by polytopic bis(pyrazolyl)methane ligands and fluoride abstraction from BF4-.

Reactions of the arene-linked bis(pyrazolyl)methane ligands m-bis[bis(1-pyrazolyl)methyl]benzene (m-[CH(pz)2]2C6H4, Lm) and 1,3,5-tris[bis(1-pyrazolyl)methyl]benzene (1,3,5-[CH(pz)2]3C6H3, L3) with BF4- salts of divalent iron, zinc, and cadmium result in fluoride abstraction from BF4- and formation of fluoride-bridged metallacyclic complexes. Treatment of Fe(BF4)2.6H2O and Zn(BF4)2.5H2O with Lm leads to the complexes [Fe2(mu-F)(mu-Lm)2](BF4)3 (1) and [Zn2(mu-F)(mu-Lm)2](BF4)3 (2), in which a single fluoride ligand and two Lm molecules bridge the two metal centers. The reaction of [Cd2(thf)5](BF4)4 with Lm results in the complex [Cd2(mu-F)2(mu-Lm)2](BF4)2 (3), which contains dimeric cations in which two fluoride and two Lm ligands bridge the cadmium centers. Equimolar amounts of the tritopic ligand L3 and Zn(BF4)2.5H2O react to give the related monofluoride-bridged complex [Zn2(mu-F)(mu-L3)2](BF4)3 (4), in which one bis(pyrazolyl)methane unit on each ligand remains unbound. NMR spectroscopic studies show that in acetonitrile the zinc metallacycles observed in the solid-state remain intact in solution.

Journal Article↗

PubMed2006

Structure-function correlations in Iron(II) tris(pyrazolyl)borate spin-state crossover complexes.

Iron(II) poly(pyrazolyl)borate complexes have been investigated to determine the impact of substituent effects, intramolecular ligand distortions, and intermolecular supramolecular structures on the spin-state crossover (SCO) behavior. The molecular structure of Fe[HB(3,4,5-Me3pz)3]2 (pz = pyrazolyl ring), a complex known to remain high spin when the temperature is lowered, reveals that this complex has an intramolecular ring-twist distortion that is not observed in analogous complexes that do exhibit a SCO at low temperatures, thus indicating that this distortion greatly influences the properties of these complexes. The structure of Fe[B(3-(cy)Prpz)4]2.(CH3OH) ((cy)Pr = cyclopropyl ring) at 294 K has two independent molecules in the unit cell, both of which are high spin; only one of these high-spin iron(II) sites, the site with the lesser ring-twist distortion, is observed to be low-spin iron(II) in the 90 K structure. A careful evaluation of the supramolecular structures of these complexes and several similar complexes reported previously revealed no strong correlation between the supramolecular packing forces and their SCO behavior. Magnetic and Mössbauer spectral measurements on Fe[B(3-(cy)Prpz)4]2 and Fe[HB(3-(cy)Prpz)3]2 indicate that both complexes exhibit a partial SCO from fully high-spin iron(II) at higher temperatures, respectively, to a 50:50 high-spin/low-spin mixture of iron(II) below 100 K. These results may be understood, in the former case, by the differences in ring-twisting and, in the latter case, by a phase transition; in all complexes in which a phase transition is observed, this change dominates the SCO behavior. A comparison of the Mössbauer spectral properties of these two complexes and of Fe[HB(3-Mepz)3]2 with that of other complexes reveals correlations between the Mössbauer-effect isomer shift and the average Fe-N bond distance and between the quadrupole splitting and the average FeN-NB intraligand dihedral torsion angles and the distortion of the average N-Fe-N intraligand bond angles.

Borates↗

PubMed2006

Ligand-promoted solvent-dependent ionization and conformational equilibria of Re(CO)3Br[CH2(S-tim)2] (tim = 1-methylthioimidazolyl). Crystal structures of Re(CO)3Br[CH2(S-tim)2] and {Re(CO)3(CH3CN)[CH2(S-tim)2]}(PF6).

The compounds Re(CO)3Br[CH2(S-tim)2] (1) and {Re(CO)3(CH3CN)[CH2(S-tim)2]}(PF6) (2), where tim is 1-methylthioimidazolyl, were prepared in high yields and characterized both in the solid state and in solution. The solid-state structures show that the ligand acts in a chelating binding mode where the eight-member chelate ring adopts twist-boat conformations in both compounds. A comparison of both solid-state IR data for CO stretching frequencies and the solution-phase voltammetric measurements for the Re(1+/2+) couples between 1, 2, and related N,N-chelates of the rhenium tricarbonyl moiety indicate that the CH2(S-tim)2 ligand is a stronger donor than even the ubiquitous dipyridyl ligands. A combination of NMR spectroscopic studies and voltammetric studies revealed that compound 1 undergoes spontaneous ionization to form {Re(CO)3(CH3CN)[CH2(S-tim)2]+}(Br-) in acetonitrile. Ionization does not occur in solvents such as CH2Cl2 or acetone that are less polar and Lewis basic (less coordinating). The equilibrium constant at 293 K for the ionization of 1 in CH3CN is 4.3 x 10(-3). The eight-member chelate rings in each 1 and 2 were found to be conformationally flexible in all solvents, and boat-chair conformers could be identified. Variable-temperature NMR spectroscopic studies were used to elucidate the various kinetic and thermodynamic parameters associated with the energetically accessible twist-boat to twist-boat and twist-boat to boat-chair interconversions.

Crystallography, X-Ray↗

PubMed2006

New N,N,N-heteroscorpionates based on 2,2'-bis(pyrazolyl)ethanamine and its derivatives. Ligands designed for probing supramolecular interactions.

The successful design and synthesis of the new bis(pyrazolyl)ethanamine ligand and its copper(I) triphenylphosphine complex is reported. The ligand coordinates to the copper(I) center in a fac tridentate fashion, through both the pyrazolyl rings and the nitrogen atom from the NH2 group. In the solid state, the compound is organized in a 2D noncovalent network by N-H...pi and C-H...pi interactions and hydrogen bonds. The analogous ligand with a benzyl group substituted on the amine forms a complex with the same copper(I) center that has a similar 2D supramolecular structure and, in addition, is organized by the benzyl synthon into a 3D architecture.

Journal Article↗

PubMed2006

Anion- and solvent-directed assembly in silver bis(thioimidazolyl)methane chemistry and the silver-sulfur interaction.

The effect of metal complexation on the structure and properties of the electroactive bis(1-methylthioimidazolyl)methane linkage isomers CH2(N-tim)2 (L1) and CH2(S-tim)2 (L2) has been explored. Coordination polymers {[Ag(L1)2]X}n (X = BF4, PF6) are formed by bridging L1 between tetrahedral silver centers giving two-dimensional cationic sheets composed of AgS(4) linkages; the anions are sandwiched between sheets. Cyclic dimers {[Ag2(L2)2]X2} (X = BF4, PF6, OSO2CF3) are formed when L2:AgX ratios are lower than 1.5. When L2:AgPF6 was 1.5 or higher, the complex [Ag4(L2)5](PF5)4 could be isolated as a solvate. The NMR, IR, electrochemical, and ESI+ mass spectral data of this latter compound indicate that extensive dissociation to the cyclic dimer and free ligand occurs in solution. Finally, a Cambridge Structural Database search was performed to provide insight into reasonable silver-sulfur bond distances, since literature values appeared to vary widely between 2.3 and 3.2 A. It was found that these distances increase with increasing coordination number of silver. The average distances for 2-, 3-, 4-, 5-, and 6-coordinate silver were found to be 2.40, 2.52, 2.62, 2.70, and 2.75 A, respectively.

Journal Article↗

PubMed2005

Unexpected new chemistry of the bis(thioimidazolyl)methanes.

[reaction: see text] The synthesis of the linkage isomers of the bis(thioimidazolyl)methane family of compounds, namely CH(2)(N-tim)(2) (1) and CH(2)(S-tim)(2) (2) (where tim = thio(methyl)imidazolyl) has been reinvestigated in order to optimize the yields, to complete the characterization of these known compounds, and also to ascertain the effect of varying heteroatom binding on their electrochemistry. During the course of these studies, the reactive intermediate ClCH(2)(S-tim) (3) was isolated and characterized. The chloromethyl derivative 3 readily decomposes on warming to give the ionic compound [CH(2)(mu-C(4)H(5)N(2)S)(2)CH(2)](Cl)(2) (4), which was converted to the hexafluorophosphate salt (5) and then was characterized by single-crystal X-ray diffraction. It was also shown that CH(2)(S-tim)(2) (2) could be converted at temperatures greater than 120 degrees C to CH(2)(N-tim)(2) (1) by a thermal isomerization that proceeds via the remaining possible linkage isomer CH(2)(S-tim)(N-tim). Electrochemical studies on 1-3 in acetonitrile reveals that each undergoes irreversible (one electron per ring) oxidations above 0.7 V versus Ag/AgCl, while the ionic compound 5 shows an irreversible reduction wave centered at -1.09 V.

Journal Article↗

PubMed2005

Ionic rotors. preparation, structure, and dynamic solid-state 2D NMR study of the 1,4-diethynylbenzenebis(triphenylborate) dianion.

The reaction between p-(LiC2)2C6H4 (generated in situ from butyllithium and dialkynylbenzene) and 2 equiv of BPh3 affords high yields of [Li(THF)4]2[p-(Ph3BC2)2C6H4], a heretofore missing member of the isoelectronic [p-(Ph3EC2)2C6H4] (E = groups 13-15 element) series. The central phenylene linker is free to rotate in the solid state, as determined by a variable-temperature solid-state 2D spin-echo NMR spectroscopic study. At room temperature, the rate of rotation is at least 20 times faster than that of its carbon-based analogue, presumably a result of Coulombic repulsions minimizing noncovalent interactions between rotating units in the borate salt.

Anions↗

PubMed2005

Polymorphism in Fe[(p-IC6H4)B(3-Mepz)3]2 (pz = pyrazolyl): impact of supramolecular structure on an iron(II) electronic spin-state crossover.

The new ligands Na[(p-IC6H4)B(3-Rpz)3] (R = H, Me) have been prepared by converting I2C6H4 to IC6H4SiMe3 with Li(t)Bu and SiMe3Cl, and then to IC6H4BBr2 with BBr3 and subsequent reaction with 3 equiv of (un)substituted pyrazole and 1 equiv of NaO(t)Bu. These new ligands react with FeBr2 to give either purple, low-spin Fe[(p-IC6H4)B(pz)3]2 or colorless, high-spin Fe[(p-IC6H4)B(3-Mepz)3]2. Depending upon the crystallization conditions, Fe[(p-IC6H4)B(3-Mepz)3]2 can exist both as two polymorphs and as a methylene chloride solvate. An examination of these polymorphs by variable-temperature X-ray crystallography, magnetic susceptibility, and Mossbauer spectroscopy has revealed different electronic spin-state crossover properties for each polymorph and yields insight into the influence of crystal packing, independent of other electronic perturbations, on the spin-state crossover. The first polymorph of Fe[(p-IC6H4)B(3-Mepz)3]2 has a highly organized three-dimensional supramolecular structure and does not undergo a spin-state crossover upon cooling to 4 K. The second polymorph of Fe[(p-IC6H4)B(3-Mepz)3]2 has a stacked two-dimensional supramolecular structure, a structure that is clearly less well organized than that of the first polymorph, and undergoes an abrupt iron(II) spin-state crossover from high spin to low spin upon cooling below ca. 130 K. The crystal structure of the methylene chloride solvate of Fe[(p-IC6H4)B(3-Mepz)3]2 has a similar stacked two-dimensional supramolecular structure, but the crystals readily lose the solvate. The resulting desolvate undergoes a gradual spin-state crossover to the low-spin state upon cooling below ca. 235 K. It is clear from a comparison of the structures that the long-range solid-state organization of the molecules, which is controlled by noncovalent supramolecular interactions, has a strong impact upon the spin-state crossover, with the more highly organized structures having lower spin-crossover temperatures and more abrupt spin-crossover behavior.

Journal Article↗

PubMed2005

Formation of third generation poly(pyrazolyl)borate ligands from alkyne coupling reactions of Fe[(p-IC6H4)B(3-Rpz)3]2 (R = H, Me; pz = pyrazolyl): pathways toward controlling an iron(II) electronic spin-state crossover.

Sonogashira coupling reactions of terminal alkynes with Fe[(p-IC6H4)B(3-Mepz)3]2 (pz = pyrazolyl ring) yield Fe[(p-PhC2C6H4)B(3-Mepz)3]2 (2), Fe[(p-Me3SiC2C6H4)B(3-Rpz)3]2 (R = H, 3a, R = Me, 3b), and Fe[(p-HC2C6H4)B(3-Mepz)3]2 (R = H, 4a, R = Me, 4b), a series of new complexes containing "third generation" poly(pyrazolyl)borate ligands. Complex 2 undergoes a fairly gradual iron(II) electronic spin-state crossover with a 30 K hysteresis, whereas complex 3b is an unusual example of a complex with equivalent iron(II) sites in the high-spin form that shows an abrupt 50% spin crossover. For complex 4b, 50% of the iron(II) sites undergo a gradual spin-state transition between 185 and 350 K with an activation energy of 1590 +/- 30 cm(-1) and a T(1/2) = 280 K and, for the remaining iron(II) sites, an abrupt cooperative spin-state crossover between 106 and 114 K. The crystal structures of 4b obtained for each of the three distinct electronic spin states reveal two crystallographically different iron(II) sites, and analysis of the molecular/supramolecular structures indicates that the difference in the degree of pyrazolyl ring tilting in the ligands between the two sites, rather than the strength of the intermolecular forces, play a prominent role in determining the temperature of the spin-state crossover.

Journal Article↗

PubMed2004

Impact of variations in design of flexible bitopic bis(pyrazolyl)methane ligands and counterions on the structures of silver(I) complexes: dominance of cyclic dimeric architecture.

The new ligands 1,1,4,4-tetra(1-pyrazolyl)butane [CH(pz)(2)(CH(2))(2)CH(pz)(2), L2] and 1,1,5,5-tetra(1-pyrazolyl)pentane [CH(pz)(2)(CH(2))(3)CH(pz)(2), L3] have been prepared to determine the structural changes in silver(I) complexes, if any, that accompany the lengthening of the spacer group between two linked bis(pyrazolyl)methane units. Silver(I) complexes of both ligands with BF(4)(-) and SO(3)CF(3)(-) as the counterion have the formula [Ag(2)(micro-L)(2)](counterion)(2). These complexes have a cyclic dimeric structure in the solid state previously observed with the shorter linked ligand CH(pz)(2)CH(2)CH(pz)(2). Similar chemistry starting with AgNO(3) for L2 yields a complex of the empirical formula [Ag(2)[micro-CH(pz)(2)(CH(2))(2)CH(pz)(2)](3)](NO(3))(2) that retains the cyclic dimeric structure, but bonding of an additional ligand creates a coordination polymer of the cyclic dimers. In contrast, coordination of the nitrate counterion to silver in the complex of L3 leads to the formation of the coordination polymer of the empirical formula [Ag(micro-CH(pz)(2)(CH(2))(3)CH(pz)(2))]NO(3). All six new complexes have extended supramolecular structures based on noncovalent interactions supported by the counterions and the functional groups designed into the ligands.

Journal Article↗

PubMed2004

Tuning the coordination geometry of silver in bis(pyrazolyl)alkane complexes.

Silver(I) complexes of the bis(pyrazolyl)methane ligands Ph(2)C(pz)(2), PhCH(pz)(2), and PhCH(2)CH(pz)(2) (pz = pyrazolyl ring) have been prepared in an attempt to explore how sterically hindered poly(pyrazolyl)methane ligands influence the variable coordination geometries exhibited by silver(I) complexes, especially its ability to participate in cation...pi interactions. The complex (Ag[(pz)(2)CPh(2)](2))(PF(6)).C(3)H(6)O adopts an unusual square planar coordination environment as indicated by the sum of the four N-Ag-N angles being 360 degrees. The proximity of phenyl groups above and below the AgN(4) core enforces the unusual coordination geometry about the metal center. This arrangement is not a result of silver(I)...pi arene interactions but rather of the constraints imposed by the steric crowding caused by (aryl)(2)C(pz)(2) ligands. In contrast, the complexes of the other two ligands, (Ag[(pz)(2)CHPh](2))(PF(6)).0.5CH(2)Cl(2) and (Ag[(pz)(2)CH(CH(2)Ph)](2))(PF(6)).CH(2)Cl(2), show normal tetrahedral geometry about the silver(I), also with no indication of silver(I)...pi arene interactions. All three new complexes have extended supramolecular structures supported by a combination of CH...pi and CH...F interactions.

Journal Article↗

PubMed2003

Synthesis and properties of rhenium carbonyl complexes of alpha,alpha'-bis[(1-pyrenyl)pyrazol-1-yl]alkane ligands.

The reaction between (1-acetyl)pyrene and dimethylformamide dimethylacetal followed by condensation of the resulting product mixture with hydrazine affords 3(5)-(1-pyrenyl)pyrazole (2) in good yield. The easily separable bis[(1-pyrenyl)pyrazole]methane derivatives CH(2)(3-pz(pyrene))(2) (3a, pz = pyrazolyl ring) and CH(2)(3-pz(pyrene))(5-pz(pyrene)) (3b) were prepared by metathetical reactions between pyrazole and CH(2)Cl(2), while CH((n)()Pr)(pz(pyrene))(2) (4) was prepared by transamination of 2 with butyraldehyde diethylacetal. Compounds 2-4 are luminescent under irradiation with UV light and have pyrenyl monomer-based emissions centered near 400 nm. Compounds 3a and 4 each react with Re(CO)(5)Br in a 1:1 molar ratio to form highly insoluble complexes Re(CO)(3)Br[(pz(pyrene))(2)CH(2)] (5) and Re(CO)(3)Br[(pz(pyrene))(2)CH((n)()Pr)] (6). Complex Re(CO)(3)Br[(pz)(2)CMe(2)] (7) was also prepared. X-ray structural studies of 6 show extensive pi-stacking of pyrenyl groups to form two-dimensional sheets. Pulsed field gradient spin-echo NMR (PGSE-NMR) experiments show that the complexes are monomeric in tetrachloroethane. Variable-temperature, difference NOE and 2-D NMR experiments demonstrate that isomers are present in solution that differ by restricted rotation about the pyrazolyl-pyrenyl bond. The pyrenyl-based emissions centered near 400 nm are quenched by complexation to the Re(CO)(3)Br moiety in 5 and 6.

Journal Article↗

PubMed2003

Supramolecular assembly and solution properties of bis(bipyridyl)ruthenium(II) coordination complexes of aryl(2-pyridyl)methanones.

A series of mono- and bis(2-pyridyl)-arylmethanone ligands were prepared by utilizing the reaction between either bromobenzonitrile or dicyanobenzene and 2-lithiopyridine in either a 1:1 or a 2:1 mol ratio, respectively. They react with [Ru(bpy)2(EtOH)2][PF6]2 to yield the new complexes [N,O-PhC(O)(2-py)Ru(bpy)2][PF6]2 (6), [p-N,O-BrC6H4C-(O)(2-py)Ru(bpy)2][PF6]2 (7), [m-N,O-BrC6H4C(O)(2-py)Ru(bpy)2][PF6]2 (8), [p-[N,O-C(O)(2-py)2Ru(bpy)2]2(C6H4)]-[PF6]4 (9), and [m-[N,O-C(O)(2-py)2Ru(bpy)2]2(C6H4)][PF6]4 (10). The solid state structures of 6 and 7 show that the octahedral cations are arranged in sinusoidal chains by pi-pi stacking and CH-pi interactions between bipyridyl groups. Substitution of bromine for hydrogen at the para position of the aryl group in 7 causes the aryl group to become involved in pi-pi stacking interactions that organize the chains into a sheet structure. The complicated 1H and 13C NMR spectra of the complexes have been fully assigned using 2D methods. The optical spectra show two absorption maxima near 434 and 564 nm due to MLCT transitions. The compounds were found to be nonluminescent. Electrochemical data acquired for CH3CN solutions of the bimetallic derivatives indicate that there is no electronic communication between metal centers mediated either through space or through ligand orbitals. Crystallographic information: 6.0.5CH3CN is monoclinic, C2/c, a = 24.3474(11) A, b = 13.7721(6) A, c = 21.3184(10) A, beta = 103.9920(10) degrees, Z = 8; 7 is monoclinic, P2(1)/c, a = 10.6639(11) A, b = 23.690(3) A, c = 13.7634(14) A, beta = 91.440(2) degrees, Z = 4.

Journal Article↗