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Biomedical subjects

James W Kirchner

Publications and source records attributed to James W Kirchner.

3 recordsLinked to original sources

Aliasing in 1/f(alpha) noise spectra: origins, consequences, and remedies.

The scaling exponent of a 1/f(alpha) noise time series is commonly estimated from the power-law slope of its Fourier power spectrum. Here I show that because 1/f(alpha) noises typically have significant power above the Nyquist frequency, measurements of their power spectra will often be severely distorted by aliasing, not only near the Nyquist frequency, but also far below it. I show that spectral aliasing typically leads to large systematic biases in the scaling exponents, and thus the fractal dimensions, that are estimated from the power-law slopes of 1/f(alpha) noise spectra. I describe a simple spectral filtering method that corrects the distortions introduced by spectral aliasing, and recovers the broadband spectrum of 1/f(alpha) noises. Like a Wiener filter, this filtering method does not require that the correct spectrum is known in advance. I illustrate this filtering technique using two environmental noise spectra that are distorted by aliasing.

Journal Article↗

Evolutionary speed limits inferred from the fossil record.

The dynamics of extinction and diversification determine the long-term effects of extinction episodes. If rapid bursts of extinction are offset by equally rapid bursts of diversification, their biodiversity consequences will be transient. But if diversification rates cannot accelerate rapidly enough, pulses of extinction will lead to long-lasting depletion of biodiversity. Here I use spectral analysis of the fossil record to test whether diversification rates can accelerate as much as extinction rates, over both short and long spans of geological time. I show that although the long-wavelength variability of diversification rates equals or exceeds that of extinctions, diversification rates are markedly less variable than extinction rates at wavelengths shorter than roughly 25 million years. This implies that there are intrinsic speed limits that constrain how rapidly diversification rates can accelerate in response to pulses of extinction.

Animals↗