Biomedical subjects

Jan Cermák

Publications and source records attributed to Jan Cermák.

7 recordsLinked to original sources

PubMed2006

Vertical and horizontal water redistribution in Norway spruce (Picea abies) roots in the Moravian Upland.

Hydraulic redistribution (HR) by roots of large Norway spruce (Picea abies (L.) Karst.) trees was investigated by means of sap flow measurements made with the heat field deformation method. Irrigation was applied to a limited portion of the root system to steepen gradients of water potential in the soil and thus enhance rates of HR. On completion of the sap flow measurements, and to aid in their interpretation, the structure of the root system of seven of the investigated trees was exposed to a depth of 30 cm with a supersonic air-stream (air-spade). Before irrigation, vertical redistribution of water was observed in large coarse roots and some adjacent small lateral roots. Immediately after localized irrigation, horizontal redistribution of water from watered roots to dry roots via the stem base was demonstrated. The amount of horizontal distribution depended on the position of the receiving roots relative to the watered roots and the absorbing area of the watered root. No redistribution from watered roots via dry soil to roots of neighboring trees was detected. Responses of sap flow to localized irrigation were more pronounced in small lateral roots than in large branching roots where release and uptake of water are integrated. Sap flow measurements with multi-point sensors along radii in large lateral roots demonstrated water extraction from different soil horizons. We conclude that synchronous measurements of sap flow in both small and large lateral roots are needed to study water absorption and transport in tree root systems.

Circadian Rhythm↗

PubMed2006

Electrical measurement of tree root absorbing surfaces by the earth impedance method: 2. Verification based on allometric relationships and root severing experiments.

We validated, by means of allometric relationships and root severing experiments, the modified earth impedance method developed for measuring absorbing root surfaces. For the allometric studies, a series of 350 small and large trees of six broadleaf and coniferous species in several experimental sites was examined. We found a good linear ln-ln fit between absorbing root surface area and basal area (or stem cross-sectional area at the root collar in seedlings) over a range of stem diameters from 0.5-55 cm. The absorbing root surface area also changed consistently with crown projected area and the root-accessed area (territory) of the tree. At the whole-tree level, absorbing root surface area reached about 70 times that of basal area and 40% of crown projected area, or roughly 1/3 of the root-accessed area in Norway spruce (in this species, the ratio was relatively larger in small trees and smaller in large trees). The absorbing root surfaces of mechanically severed parts of Norway spruce root systems changed in about the same proportions as the geometrically determined parts of the severed root systems. These results are promising and support field applications of the method in biological and ecological studies.

Absorption↗

PubMed2003

Modeling effects of hydrological changes on the carbon and nitrogen balance of oak in floodplains.

We extended the applicability of the ecosystem model BIOME-BGC to floodplain ecosystems to study effects of hydrological changes on Quercus robur L. stands. The extended model assesses floodplain peculiarities, i.e., seasonal flooding and water infiltration from the groundwater table. Our interest was the tradeoff between (a). maintaining regional applicability with respect to available model input information, (b). incorporating the necessary mechanistic detail and (c). keeping the computational effort at an acceptable level. An evaluation based on observed transpiration, timber volume, soil carbon and soil nitrogen content showed that the extended model produced unbiased results. We also investigated the impact of hydrological changes on our oak stands as a result of the completion of an artificial canal network in 1971, which has stopped regular springtime flooding. A comparison of the 11 years before versus the 11 years after 1971 demonstrated that the hydrological changes affected mainly the annual variation across years in leaf area index (LAI) and soil carbon and nitrogen sequestration, leading to stagnation of carbon and nitrogen stocks, but to an increase in the variance across years. However, carbon sequestration to timber was unaffected and exhibited no significant change in cross-year variation. Finally, we investigated how drawdown of the water table, a general problem in the region, affects modeled ecosystem behavior. We found a further amplification of cross-year LAI fluctuations, but the variance in soil carbon and nitrogen stocks decreased. Volume increment was unaffected, suggesting a stabilization of the ecosystem two decades after implementation of water management measures.

Carbon↗

PubMed2002

Radial patterns of sap flow in woody stems of dominant and understory species: scaling errors associated with positioning of sensors.

We studied sap flow in dominant coniferous (Pinus sylvestris L.) and broadleaf (Populus canescens L.) species and in understory species (Prunus serotina Ehrh. and Rhododendron ponticum L.) by the heat field deformation (HFD) method. We attempted to identify possible errors arising during flow integration and scaling from single-point measurements to whole trees. Large systematic errors of -90 to 300% were found when it was assumed that sap flow was uniform over the sapwood depth. Therefore, we recommend that the radial sap flow pattern should be determined first using sensors with multiple measuring points along a stem radius followed by single-point measurements with sensors placed at a predetermined depth. Other significant errors occurred in the scaling procedure even when the sap flow radial pattern was known. These included errors associated with uncertainties in the positioning of sensors beneath the cambium (up to 15% per 1 mm error in estimated xylem depth), and differences in environmental conditions when the radial profile applied for integration was determined over the short term (up to 47% error). High temporal variation in the point-to-area correction factor along the xylem radius used for flow integration is also problematic. Compared with midday measurements, measurements of radial variation of sap flow in the morning and evening of sunny days minimized the influence of temporal variations on the point-to-area correction factor, which was especially pronounced in trees with a highly asymmetric sap flow radial pattern because of differences in functioning of the sapwood xylem layers. Positioning a single-point sensor at a depth with maximum sap flow is advantageous because of the high sensitivity of maximum sap flow to water stress conditions and changes in micro-climate, and because of the lower random errors associated with the positioning of a single-point sensor along the xylem radius.

Pinus↗

PubMed2000

Radial variation in sap flow in five laurel forest tree species in Tenerife, Canary Islands.

Variations in radial patterns of xylem water content and sap flow rate were measured in five laurel forest tree species (Laurus azorica (Seub.) Franco, Persea indica (L.) Spreng., Myrica faya Ait., Erica arborea L. and Ilex perado Ait. ssp. platyphylla (Webb & Berth.) Tutin) growing in an experimental plot at Agua García, Tenerife, Canary Islands. Measurements were performed around midday during warm and sunny days by the heat field deformation method. In all species, water content was almost constant (around 35% by volume) over the whole xylem cross-sectional area. There were no differences in wood color over the whole cross-sectional area of the stem in most species with the exception of E. arborea, whose wood became darker in the inner layers. Radial patterns of sap flow were highly variable and did not show clear relationships with tree diameter or species. Sap flow occurred over the whole xylem cross-sectional area in some species, whereas it was limited to the outer xylem layers in others. Sap flow rate was either similar along the xylem radius or exhibited a peak in the outer part of the xylem area. Low sap flow rates with little variation in radial pattern were typical for shaded suppressed trees, whereas dominant trees exhibited high sap flow rates with a peak in the radial pattern. Stem damage resulted in a significant decrease in sap flow rate in the outer xylem layers. The outer xylem is more important for whole tree water supply than the inner xylem because of its larger size. We conclude that measurement of radial flow pattern provides a reliable method of integrating sap flow from individual measuring points to the whole tree.

Journal Article↗

PubMed1999

Mapping tree root systems with ground-penetrating radar.

A ground-penetrating radar (GPR) technique was used to study the three-dimensional distribution of root systems of large (DBH = 14 to 35 cm) oak trees (Quercus petraea (Mattusch.) Liebl.) in relatively dry, luvisoil on loamy deluvium and weathered granodiorite. We used a pulse EKKO 1000 GPR system, a profile grid of 0.25 x 0.25 meters, at 0.05 m intervals, and a signal frequency of 450 MHz, to assure resolution of about 3 cm in both directions (further increases in resolution up to 1 cm are possible with the system). Coarse root density was 6.5 m m(-2) of stand area and 3.3 m m(-3) of soil volume. Maximum rooting depth of the experimental oaks was 2 m, and the root ground plan was significantly larger (about 1.5 times) than the crown ground plan. Based on earlier studies of Quercus robur L. from floodplain forests, where the extent of the root systems was much smaller (root ground plan:crown ground plan ratio of 0.6), we conclude that the high root ground plan:crown ground plan ratio indicates less favorable conditions of water supply at the experimental site than in the floodplain forest. The ground-penetrating radar system is noninvasive and allows relatively rapid and repeated measurements of the distribution of coarse root systems of trees.

Journal Article↗

PubMed1998

Leaf distribution in large trees and stands of the floodplain forest in southern Moravia.

Vertical distributions of leaf dry mass (M(d)) and leaf area (A(f)) were related to relative irradiance (I(r); I(r) above the stand = 1) in closed-canopy, old-growth stands of the floodplain forest in southern Moravia composed largely of Quercus, Fraxinus and Tilia species. Foliage area and mass at any given canopy height were converted to solar equivalent leaf area (A(s)) and mass (M(s)) by multiplying actual values at a given level in the canopy by the relative irradiance at that position. Stand leaf area index (LAI) was 5 (7 including shrub and herb layer), and solar equivalent parameters reached about 25% of that amount. In all species, vertical profiles of both relative irradiance and leaf dry mass to area ratio (LMA) were sigmoidal and the two variables were linearly related. The dominant, upper canopy species had a larger proportion of solar equivalent foliage than suppressed understory species. For individual trees of all species, the upper canopy had a larger proportion of solar equivalent foliage than the lower canopy. Light compensation points at both the leaf and whole-tree level were defined according to leaf or tree position, size and structure. I conclude that optimization of A(s) for forest stands may be used as a basis for determining thinning schedules and evaluating tree survival after damage to tree crowns by various factors.

Journal Article↗