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Biomedical subjects

Jane E Stewart

Publications and source records attributed to Jane E Stewart.

3 recordsLinked to original sources

Beyond survival: microbial dispersion via aerosolization as an evolutionary trait.

Airborne dispersion of microorganisms is a constant ecologically significant global process. However, the initial stage of this process, the uplift of microbes to the atmosphere, remains poorly understood as an ecological filter. Differential aerosolization could serve as a potent selector allowing a subset of microorganisms to disperse via air more efficiently, providing potential advantages in establishment in new environments. While traits associated with atmospheric survival and deposition are well documented, microbial aerosolization is still generally presumed to be stochastic, primarily due to the small size of microorganisms and their lack of active biological ejection mechanisms like those found in seeds and larger fungal spores. However, emerging evidence suggests that uplift into the atmosphere is a dynamic interaction between physical forces in the environment and specific biological traits. This review synthesizes observations from genomic source tracking studies and laboratory experiments that describe how preferential enrichment of certain taxa into the atmosphere is based on intrinsic properties including extracellular polymeric substance (EPS) mediated aggregation, cell surface hydrophobicity, surfactant production, and other potentially relevant microbial traits. Additional candidate traits that may contribute to enhanced aerosolization are identified along with the potential mechanistic basis by which they might influence uplift. Future work with controlled chamber studies on single organisms and integration of atmospheric flux measurements with trait-based microbial uplift can provide a mechanistic basis for more accurate models of bioaerosol flux. Improving our comprehension of bioaerosol aerosolization behavior and flux is critical to understanding the dispersal of microorganisms across diverse habitats and their subsequent impacts on ecosystems, global climate, and the spread of diseases.

atmospheric microbiology

Tree Killer, Qu'est-ce Que C'est? Insights From Forest Pathogen Genomes.

Forests are central to planetary health but are increasingly challenged by emerging diseases driven by climate change, global trade, and anthropogenic disturbance. Despite the apparent resilience of long-lived, genetically diverse tree hosts, forest ecosystems have repeatedly experienced landscape-level pathogen-driven transformations. Advances in genomics, transcriptomics, and functional biology have transformed our understanding of how fungal and oomycete pathogens interact with their hosts across a continuum of lifestyles, from saprotrophy and necrotrophy to biotrophy. Here, we synthesize insights from comparative and population genomics and functional studies across diverse forest pathosystems to examine the traits that characterize successful tree pathogens. We highlight how lifestyle plasticity, adaptations to woody tissues, vector-mediated transmission, and biotrophic stealth enable pathogens to colonize perennial hosts and persist over long temporal scales. We further examine how genome plasticity, hybridization, and horizontal gene transfer generate adaptive potential that often outpaces host evolutionary responses under current environmental change. Finally, we discuss emerging genomic tools, including biosurveillance, machine learning-based classification, and genome editing, that are beginning to link genotype to phenotype and inform assessments of disease risk. By integrating genomic, ecological, and evolutionary perspectives, this review outlines general principles governing forest pathogen success and identifies priorities for future research aimed at improving understanding, early detection, and management of forest diseases in a changing world.

Trees

Myco-Ed: Mycological curriculum for education and discovery.

Fungi are important and hyperdiverse organisms, yet chronically understudied. Most fungal clades have no reference genomes, impeding our understanding of their ecosystem functions and use as solutions in health and biotechnology. Also, opportunities for training in fungal biology and genomics are lacking, creating a bottleneck that hinders the recruitment and cultivation of a talented future mycological workforce. To address these issues, we developed Myco-Ed, an educational program offering training and scientific contributions through genome sequencing and analysis. Myco-Ed empowers students to pursue careers in fungal biology while improving fungal resources. Myco-Ed has been piloted at 12 institutions (15 classrooms) ranging from online e-Campuses to R1 universities, resulting in hundreds of fungal observations and many new high-quality reference genomes.

Curriculum