Biomedical subjects

Jesper Lykke Jacobsen

Publications and source records attributed to Jesper Lykke Jacobsen.

8 recordsLinked to original sources

PubMed2006

Classical dimers with aligning interactions on the square lattice.

We present a detailed study of a model of close-packed dimers on the square lattice with an interaction between nearest-neighbor dimers. The interaction favors parallel alignment of dimers, resulting in a low-temperature crystalline phase. With large-scale Monte Carlo and transfer matrix calculations, we show that the crystal melts through a Kosterlitz-Thouless phase transition to give rise to a high-temperature critical phase, with algebraic decays of correlations functions with exponents that vary continuously with the temperature. We give a theoretical interpretation of these results by mapping the model to a Coulomb gas, whose coupling constant and associated exponents are calculated numerically with high precision. Introducing monomers is a marginal perturbation at the Kosterlitz-Thouless transition and gives rise to another critical line. We study this line numerically, showing that it is in the Ashkin-Teller universality class, and terminates in a tricritical point at finite temperature and monomer fugacity. In the course of this work, we also derive analytic results relevant to the noninteracting case of dimer coverings, including a Bethe ansatz (at the free fermion point) analysis, a detailed discussion of the effective height model, and a free field analysis of height fluctuations.

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PubMed2006

Unconventional continuous phase transition in a three-dimensional dimer model.

Phase transitions occupy a central role in physics, due both to their experimental ubiquity and their fundamental conceptual importance. The explanation of universality at phase transitions was the great success of the theory formulated by Ginzburg and Landau, and extended through the renormalization group by Wilson. However, recent theoretical suggestions have challenged this point of view in certain situations. In this Letter we report the first large-scale simulations of a three-dimensional model proposed to be a candidate for requiring a description beyond the Landau-Ginzburg-Wilson framework: we study the phase transition from the dimer crystal to the Coulomb phase in the cubic dimer model. Our numerical results strongly indicate that the transition is continuous and is compatible with a tricritical universality class, at variance with previous proposals.

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PubMed2005

Interacting classical dimers on the square lattice.

We study a model of close-packed dimers on the square lattice with a nearest neighbor interaction between parallel dimers. This model corresponds to the classical limit of quantum dimer models [D. S. Rokhsar and S. A. Kivelson, Phys. Rev. Lett. 61, 2376 (1988)]. By means of Monte Carlo and transfer matrix calculations, we show that this system undergoes a Kosterlitz-Thouless transition separating a low temperature ordered phase where dimers are aligned in columns from a high temperature critical phase with continuously varying exponents. This is understood by constructing the corresponding Coulomb gas, whose coupling constant is computed numerically. We also discuss doped models and implications on the finite-temperature phase diagram of quantum dimer models.

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PubMed2004

Fermionic field theory for trees and forests.

We prove a generalization of Kirchhoff's matrix-tree theorem in which a large class of combinatorial objects are represented by non-Gaussian Grassmann integrals. As a special case, we show that unrooted spanning forests, which arise as a q-->0 limit of the Potts model, can be represented by a Grassmann theory involving a Gaussian term and a particular bilocal four-fermion term. We show that this latter model can be mapped, to all orders in perturbation theory, onto the N-vector model at N=-1 or, equivalently, onto the sigma model taking values in the unit supersphere in R(1|2). It follows that, in two dimensions, this fermionic model is perturbatively asymptotically free.

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PubMed2004

Conformal field theory of the Flory model of polymer melting.

We study the scaling limit of a fully packed loop model in two dimensions, where the loops are endowed with a bending rigidity. The scaling limit is described by a three-parameter family of conformal field theories, which we characterize via its Coulomb-gas representation. One choice for two of the three parameters reproduces the critical line of the exactly solvable six-vertex model, while another corresponds to the Flory model of polymer melting. Exact central charge and critical exponents are calculated for polymer melting in two dimensions. Contrary to predictions from mean-field theory we show that polymer melting, as described by the Flory model, is continuous. We test our field theoretical results against numerical transfer matrix calculations.

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PubMed2004

Continuous melting of compact polymers.

The competition between chain entropy and bending rigidity in compact polymers can be addressed within a lattice model introduced by Flory in 1956 [Proc. R. Soc. London A 234, 60 (1956)]]. It exhibits a transition between an entropy dominated disordered phase and an energetically favored crystalline phase. The nature of this order-disorder transition has been debated ever since the introduction of the model. Here we present exact results for the Flory model in two dimensions relevant for polymers on surfaces, such as DNA adsorbed on a lipid bilayer. We predict a continuous melting transition and compute exact values of critical exponents at the transition point.

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PubMed2002

Monochromatic path crossing exponents and graph connectivity in two-dimensional percolation.

We consider the fractal dimensions d(k) of the k-connected part of percolation clusters in two dimensions, generalizing the cluster (k=1) and backbone (k=2) dimensions. The codimensions x(k)=2-d(k) describe the asymptotic decay of the probabilities P(r,R) approximately (r/R)(x(k)) that an annulus of radii r<<1 and R>>1 is traversed by k disjoint paths, all living on the percolation clusters. Using a transfer matrix approach, we obtain numerical results for x(k), k<or=6. They are well fitted by the ansatz x(k)=1 / 12k(2)+1 / 48k+(1-k)C, with C=0.0181+/-0.0006.

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PubMed2002

Phase diagram and critical exponents of a Potts gauge glass.

The two-dimensional q-state Potts model is subjected to a Z(q) symmetric disorder that allows for the existence of a Nishimori line. At q=2, this model coincides with the +/- J random-bond Ising model. For q>2, apart from the usual pure- and zero-temperature fixed points, the ferro/paramagnetic phase boundary is controlled by two critical fixed points: a weak disorder point, whose universality class is that of the ferromagnetic bond-disordered Potts model, and a strong disorder point which generalizes the usual Nishimori point. We numerically study the case q=3, tracing out the phase diagram and precisely determining the critical exponents. The universality class of the Nishimori point is inconsistent with percolation on Potts clusters.

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