Biomedical subjects

Jianming Zhang

Publications and source records attributed to Jianming Zhang.

15 recordsLinked to original sources

PubMed2006

Crystallization behaviors of poly(3-hydroxybutyrate) and poly(l-lactic acid) in their immiscible and miscible blends.

By adjusting the molecular weight of the poly(l-lactic acid) (PLLA) component in poly(3-hydroxybutyrate) (PHB)/PLLA blends, we investigated the crystallization behaviors of the two components in their immiscible and miscible 50:50 blends by real time infrared (IR) spectroscopy. In the immiscible PHB/PLLA blend, the stepwise crystallization of PHB and PLLA was realized at different crystallization temperatures. PLLA crystallizes first at a higher temperature (120 degrees C). Its crystallization mechanism from the immiscible PHB/PLLA melt is not affected by the presence of the PHB component, while its crystallization rate is substantially depressed. Subsequently, in the presence of crystallized PLLA, the isothermal melt-crystallization of PHB takes place at a lower temperature (90 degrees C). It is interesting to find that there are two growth stages for PHB. At the early stage of the growth period, the Avrami exponent is 5.0, which is unusually high, while in the late stage, it is 2.5, which is very close to the reported value (n approximately 2.5) for the neat PHB system. In contrast to the stepwise crystallization of PHB and PLLA in the immiscible blends, the almost simultaneous crystallization of PHB and PLLA in the miscible 50:50 blend was observed at the same crystallization temperature (110 degrees C). Detailed dynamic analysis by IR spectroscopy has disclosed that, even in such apparently simultaneous crystallization, the crystallization of PLLA actually occurs faster than that of PHB. It has been found that, both in the immiscible and miscible blends, the crystallization dynamics of PHB are heavily affected by the presence of crystallized PLLA.

Crystallization↗

PubMed2006

Hyperthermal reactions of O and O2 with a hydrocarbon surface: direct C-C bond breakage by O and H-atom abstraction by O2.

A C-C bond-breaking reaction has been observed when a beam containing hyperthermal oxygen was directed at a continuously refreshed saturated hydrocarbon liquid (squalane) surface. The dynamics of this C-C bond-breaking reaction have been investigated by monitoring time-of-flight and angular distributions of the volatile product, OCH3 or H2CO. The primary product is believed to be the methoxy radical, OCH3, but if this radical is highly internally excited, then it may undergo secondary dissociation to form formaldehyde, H2CO. Either the primary or the secondary product may scatter directly into the gas phase before thermal equilibrium with the surface is reached, or they may become trapped on the surface and desorb in thermal equilibrium with the surface. Direct, single-collision scattering events that produce a C-C bond-breaking product are described with a kinematic picture that allows the determination of the effective surface mass encountered by an incident O atom, the atom-surface collision energy in the center-of-mass frame, and the fraction of the center-of-mass collision energy that goes into translation of the scattered gaseous product and the recoiling surface fragment. The dynamical behavior of the C-C bond-breaking reaction is compared with that of the H-atom abstraction reaction, which was the subject of an earlier study. Another reaction, H-atom abstraction by O2 (which is present in the hyperthermal beam), has also been observed, and the dynamics of this reaction are compared with the inelastic scattering dynamics of O2 and the dynamics of H-atom abstraction by O. The dynamics involving direct inelastic and reactive scattering of O2 are also described in terms of a kinematic picture where the incident O2 molecule is viewed as interacting with a local region of the surface.

Journal Article↗

PubMed2006

Epitaxial crystallization of isotactic poly(methyl methacrylate) on highly oriented polyethylene.

The annealing behavior of amorphous i-PMMA thin films on highly oriented HDPE substrates was studied by transmission infrared spectroscopy and electron diffraction. The i-PMMA thin film on highly oriented HDPE exhibits a much faster crystallization rate than usual, providing not only a good method for the preparation of crystalline i-PMMA thin and ultrathin film, but also the convenience to observe the crystallization process by infrared spectroscopy in situ. The overall crystallization kinetics of the i-PMMA thin film on the highly oriented HDPE layer was also explored in this work, and an Avrami exponent of about 2 was obtained. The accelerated crystallization behavior indicates a special interaction between HDPE and i-PMMA, which favors the nucleation and crystallization of i-PMMA. This special interaction leads also to an oriented alignment of i-PMMA on the HDPE substrate with both polymer chains parallel, i.e., the occurrence of heteroepitaxy, which could be verified by the polarized infrared spectra and electron diffraction pattern. Electron diffraction analysis further demonstrated that the contact planes of this epitaxial system are (100) lattice planes of both polymers. This can be explained in terms of a two-dimensional lattice matching.

Journal Article↗

PubMed2006

Molecular weight dependence of the poly(L-lactide)/poly(D-lactide) Stereocomplex at the air-water interface.

The molecular weight dependence of poly(L-lactide)/poly(D-lactide) (PLLA/PDLA) stereocomplex behavior at the air-water interface was studied by surface pressure-area (pi-A) isotherms and atomic force microscopy (AFM). It was found that the compression-induced sterecomplexation of a PDLA/PLLA equimolar blend with high molecular weight (M(w) = 1 x 10(6) and 9.8 x 10(5), respectively) could occur at the air-water interface. This result is in marked contrast with the stereocomplexation of PDLA/PLLA blends in the bulk from the melt or in solutions, where the homocrystallites of either PLLA or PDLA rather than stereocomplex crystallites will be formed preferentially when the molecular weights of both polymers are higher than 1 x 10(5). Unexpectedly, the Langmuir-Blodgett behavior of the PDLA/PLLA blend with lower molecular weight (M(w) = 4 x 10(3) and 3.2 x 10(3), respectively), which should be favored in the stereocomplex, was distinct from that of other higher molecular weight blends. AFM images clearly disclosed for the first time the morphological changes of the equimolar blends of PLLA and PDLA at the air-water interface induced by increasing the surface pressure of the monolayer. Of particular note, the bilayer mechanism for the plateau in the isotherm was directly verified by the AFM height images.

Air↗

PubMed2006

Exploring time-dependent structural changes during the cold crystallization process of isotactic polystyrene by infrared spectroscopy and multivariate curve resolution.

The present study attempts an application of Fourier transform infrared (FT-IR) spectroscopy in conjunction with multivariate curve resolution (MCR) techniques to explore the structural evolution of isotactic polystyrene (iPS) during the cold crystallization process. The focus of the present study is placed on the performance of MCR techniques, e.g., orthogonal projection (OP), alternating least squares (ALS), and fixed-size moving window evolving factor analysis (FSMWEFA), and the interpretability of spectral changes in the investigated chemical process. As a result, valuable information and conclusions about the structural evolution of iPS during the crystallization process can be extracted: when the amorphous phase of iPS changes, the ordering of the phenyl rings takes place first, and then the polymer chains adjust their local conformations to form short 3(1) helix structures. Furthermore, according to intensity profiles of the spectral variations, the ordering of the phenyl rings proceeds more intensely than the formation of ordered local chains, and the structural evolution of iPS occurs even during the induction period. The spectral variations resulting from the conformational changes in the 3(1) helical structures depend on the sequence length of the helical chains: the longer the polymer chain is, the smaller the corresponding band variations are. It has been demonstrated that the combination of FTIR spectroscopy and chemometric MCR techniques is very promising for the analysis of the crystallization process of polymers. MCR is a powerful tool for analyzing and visualizing spectral data and integrating them with other information, making spectral intensity variations more amenable to interpretation in order to explore the molecular dynamics of polymers.

Algorithms↗

PubMed2005

Effects of argon dilution on the translational and rotational temperatures of SiH in silane and disilane plasmas.

The effects of argon dilution on the translational and rotational temperatures of SiH in both silane and disilane plasmas have been investigated using the imaging of radicals interacting with surfaces (IRIS) technique. The average rotational temperature of SiH determined from the SiH excitation spectra is approximately 500 K in both SiH(4)/Ar and Si(2)H(6)/Ar plasmas, with no obvious dependence on the fraction of argon dilution. Modeling of kinetic data yields average SiH translational temperatures of approximately 1000 K, with no dependence on the fraction of argon in the SiH(4)/Ar plasmas within the studied range. In the Si(2)H(6)/Ar plasmas, however, the translational temperature decreases from approximately 1000 to approximately 550 K as the Ar fraction in the plasma increases. Thus, at the highest Ar fractions, the translational and rotational temperatures are nearly identical, indicating that the SiH radicals are thermally equilibrated. The underlying chemistry and mechanisms of SiH energy equilibration in Ar-diluted plasmas are discussed.

Journal Article↗

PubMed2005

Miscibility and hydrogen-bonding interactions in biodegradable polymer blends of poly(3-hydroxybutyrate) and a partially hydrolyzed poly(vinyl alcohol).

Miscibility and hydrogen-bonding interactions, as well as the morphological properties, of biodegradable polymer blends of poly(3-hydroxybutyrate) (PHB) and a 80% hydrolyzed poly(vinyl alcohol) (PVA80) were studied using Fourier transform infrared spectroscopy (FTIR) and differential scanning calorimetry (DSC). It was found that PHB is miscible with PVA80 in the amorphous phase over the whole composition range. PVA80 or PHB assumes the amorphous state when its content in the blend is lower than 30 or 20 wt %, respectively. Due to the heavy overlapping of C=O stretching bands from both PVA80 and PHB and the nonmeasurable peak shift in the OH stretching band region, hydrogen-bonding interactions between the OH group of PVA80 and the C=O group of PHB were not detectable at room temperature, but were observed at a higher temperature of 180 degrees C. This is because hydrogen-bonding interactions are promoted above the melting points of these two crystalline polymers, by increasing the mixing entropy and reducing the Deltachi effect. Blending PHB with PVA80 does not have a significant effect on the OH groups of PVA80 that are hydrogen bonded with each other. Instead, the C=O groups of PHB dispossess some of the OH groups that are hydrogen bonded to the C=O groups of PVA80, which gives rise to the miscibility between PVA80 and PHB in the amorphous phase.

Biodegradation, Environmental↗

PubMed2005

Assembly of highly aligned DNA strands onto Si chips.

This paper reports a robust and efficient approach to assemble highly aligned DNA strands onto Si chips. The method combines advantages from molecular combing and microcontact printing to realize controlling both the density and direction of DNA strands on the Si chip. In addition, it also can be utilized to prepare stretched DNA structures on solid surfaces. Compared to approaches that use molecular combing directly on silanated surfaces, the stretched single-chain DNA structures are straighter. Furthermore, by exploiting the hydrophobic property of the intrinsic poly(dimethylsiloxane) stamp, this study also describes a simple way to produce straight bundled DNA arrays on Si and other substrates.

Adsorption↗

PubMed2005

Initial crystallization mechanism of isotactic polystyrene from different States.

The isothermal crystallization processes of isotactic polystyrene at 160 degrees C from different initial states (quenched glassy state and melt state), i.e., cold- and melt-crystallization processes, have been investigated by infrared (IR) and generalized two-dimensional (2D) IR correlation spectroscopy. It has been found that not only the crystallization kinetics and crystallinity but also the sequential changes of the amorphous and crystalline sensitive bands are quite different for the cold- and melt-crystallization processes. This leads to the conclusion that the physical origins for spinodal decomposition prior to polymer crystallization may be different for different crystallization processes.

Journal Article↗

PubMed2005

Translational effects of differential codon usage among intragenic domains of new genes in Drosophila.

Evolved codon usages often pose a technical challenge over the expressing of eukaryotic genes in microbial systems because of changed translational machinery. In the present study, we investigated the translational effects of intragenic differential codon usage on the expression of the new Drosophila gene, jingwei (jgw), a chimera derived from two unrelated parental genes: Ymp and Adh. We found that jgw possesses a strong intragenic differential usage of synonymous codons, i.e. the Adh-derived C-domain has a significantly higher codon bias than that of the Ymp-derived N-domain (P=0.0023 by t-test). Additional evolutionary analysis revealed the heterogeneous distribution of rare codons, implicating its role in gene regulation and protein translation. The in vitro expression of jgw further demonstrated that the heterogeneous distribution of rare codons has played a role in regulating gene expression, particularly, affecting the quality of protein translation.

Alcohol Dehydrogenase↗

PubMed2004

Evolving protein functional diversity in new genes of Drosophila.

The mechanism by which protein functional diversity expands is an important evolutionary issue. Studies of recently evolved chimeric genes permit direct investigation of the origin of new protein functions before they become obscured by subsequent evolution. Found in several African Drosophila species, jingwei (jgw), a recently evolved gene with a domain derived from the still extant short-chain alcohol dehydrogenase (ADH) through retroposition, provides an opportunity to examine this previously undescribed process directly. We expressed JGW proteins in a microbial expression system and, after purification, investigated their enzymatic properties. We found that, unexpectedly, positive Darwinian selection for amino acid replacements outside the active site of JGW produced a novel dehydrogenase with altered substrate specificity compared with the ancestral ADH. Instead of detoxifying and assimilating ethanol like its Adh parental gene, we observe that JGW efficiently utilizes long-chain primary alcohols found in hormone and pheromone metabolism. These data suggest that protein functional diversity can expand rapidly under the joint forces of exon shuffling, gene duplication, and natural selection.

Alcohol Dehydrogenase↗

PubMed2004

Polyaniline nanowires on Si surfaces fabricated with DNA templates.

It is essential to put individual, free-standing nanowires onto insulating substrates and integrate them to useful devices. Here we report a strategy for fabrication of conducting polymer nanowires on thermally oxidized Si surfaces by use of DNA as templates. The direct use of stretched and immobilized DNA strands as templates avoids the agglomeration of DNA caused by shielding of charges on DNA when polyaniline/DNA complexes formed in solution. Most importantly, the oriented DNA strands immobilized on the Si surface predetermine the position and the orientation of the nanowires. The approach described here is the first step toward uniting the programmable-assembly ability of DNA with the unique electronic properties of conducting polymers for high-density functional nanodevices. The conductivity of the nanowires is very sensitive to the proton doping-undoping process, suggesting that the nanowires hold great promise for sensitive chemical sensor applications.

Aniline Compounds↗

PubMed2003

Constitutional mutation of keratin 13 gene in familial white sponge nevus.

OBJECTIVE: We sought to investigate a novel mutation in the keratin genes assumed to be responsible for a familial case of oral white sponge nevus. PATIENTS AND METHODS: The affected family consisted of a 36-year-old woman, her 17-year-old daughter, and her 14-year-old son. Keratin 4 and 13 genes extracted from venous blood lymphocytes were amplified by using the polymerase chain reaction and directly sequenced. RESULTS: Sequencing analysis of the 3 patients revealed the presence of a novel heterozygous T-to-C transition mutation in exon 1 of the keratin 13 gene, with no abnormalities detected in the keratin 4 gene. CONCLUSION: We identified a novel heterozygous missense mutation at 332T>C in the keratin 13 gene believed to be related to the development of white sponge nevus.

Adolescent↗

PubMed2003

Origin of new genes: evidence from experimental and computational analyses.

Exon shuffling is an essential molecular mechanism for the formation of new genes. Many cases of exon shuffling have been reported in vertebrate genes. These discoveries revealed the importance of exon shuffling in the origin of new genes. However, only a few cases of exon shuffling were reported from plants and invertebrates, which gave rise to the assertion that the intron-mediated recombination mechanism originated very recently. We focused on the origin of new genes by exon shuffling and retroposition. We will first summarize our experimental work, which revealed four new genes in Drosophila, plants, and humans. These genes are 10(6) to 10(8) million years old. The recency of these genes allows us to directly examine the origin and evolution of genes in detail. These observations show firstly the importance of exon shuffling and retroposition in the rapid creation of new gene structures. They also show that the resultant chimerical structures appearing as mosaic proteins or as retroposed coding structures with novel regulatory systems, often confer novel functions. Furthermore, these newly created genes appear to have been governed by positive Darwinian selection throughout their history, with rapid changes of amino acid sequence and gene structure in very short periods of evolution. We further analyzed the distribution of intron phases in three non-vertebrate species, Drosophila melanogaster, Caenorhabditis elegans, and Arabidosis thaliana, as inferred from their genome sequences. As in the case of vertebrate genes, we found that intron phases in these species are unevenly distributed with an excess of phase zero introns and a significant excess of symmetric exons. Both findings are consistent with the requirements for the molecular process of exon shuffling. Thus, these non-vertebrate genomes may have also been strongly impacted by exon shuffling in general.

Cytochromes c1↗

PubMed2002

Cadmium and zinc interactions and their transfer in soil-crop system under actual field conditions.

The transfer of Cd and Zn from calcareous soils nearby a non-ferrous mining and smelting bases to the spring wheat (Triticum aestivum L.) and corn (Zea mays L.) tissues and the interactions between the two metals concerned were investigated under actual field conditions. Samples of soils and entire crops were randomly collected during harvest time in 1998 in the Baiyin region. The soil metal contents showed that the furrows had been polluted (mean values: 3.16 mg kg(-1) for Cd; 146.78 mg kg(-1) for Zn) and the significant spatial variation of the soil contamination existed here (ranges, Cd: 0.14-19.3 mg kg(-1); Zn: 43.5-565.0 mg kg(-1)). The translocation ratios of the two metals from soil to crop parts in the region studied were relatively lower and the order of the element transfer in different plant tissues was root > stem > grain. The transfer ratio of element Cd was lower than that of element Zn. Cd and Zn uptake by the crop structures could be best described by four models (P < 0.01): linear; exponential; quadratic; and cubic. Apart from a linear relationship between the element Cd in the corn grains and soils, models were generally non-lincar. An analysis of Cd-Zn interaction mechanism led to the conclusion that the effects of the two metals were synergistic to each other under field conditions, in which increasing Cd and Zn contents in soils could increase the accumulations of Zn or Cd in the two crops.

Cadmium↗