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John D Weeks

Publications and source records attributed to John D Weeks.

5 recordsLinked to original sources

Attraction between like-charged walls: Short-ranged simulations using local molecular field theory.

Effective attraction between like-charged walls mediated by counterions is studied using local molecular field (LMF) theory. Monte Carlo simulations of the "mimic system" given by LMF theory, with short-ranged "Coulomb core" interactions in an effective single particle potential incorporating a mean-field average of the long-ranged Coulomb interactions, provide a direct test of the theory, and are in excellent agreement with more complex simulations of the full Coulomb system by Moreira and Netz [Eur. Phys. J. E 8, 33 (2002)]. A simple, generally applicable criterion to determine the consistency parameter sigma(min) needed for accurate use of the LMF theory is presented.

Chemical Phenomena↗

Local molecular field theory for effective attractions between like charged objects in systems with strong Coulomb interactions.

Strong, short-ranged positional correlations involving counterions can induce a net attractive force between negatively charged strands of DNA and lead to the formation of ion pairs in dilute ionic solutions. However, the long range of the Coulomb interactions impedes the development of a simple local picture. We address this general problem by mapping the properties of a nonuniform system with Coulomb interactions onto those of a simpler system with short-ranged intermolecular interactions in an effective external field that accounts for the averaged effects of appropriately chosen long-ranged and slowly varying components of the Coulomb interactions. The remaining short-ranged components combine with the other molecular core interactions and strongly affect pair correlations in dense or strongly coupled systems. We show that pair correlation functions in the effective short-ranged system closely resemble those in the uniform primitive model of ionic solutions and illustrate the formation of ion pairs and clusters at low densities. The theory accurately describes detailed features of the effective attraction between two equally charged walls at strong coupling and intermediate separations of the walls. Analytical results for the minimal coupling strength needed to get any attraction and for the separation at which the attractive force is a maximum are presented.

DNA↗

Spiral evolution in a confined geometry.

Supported nanoscale lead crystallites with a step emerging from a noncentered screw dislocation on the circular top facet were prepared by rapid cooling from just above the melting temperature. STM observations of the top facet show a nonuniform rotation rate and shape of the spiral step as the crystallite relaxes. These features can be accurately modeled using curvature driven dynamics, as in classical models of spiral growth, with boundary conditions fixing the dislocation core and regions of the step lying along the outer facet edge.

Journal Article↗

Structure of nonuniform hard sphere fluids from shifted linear truncations of functional expansions.

Percus showed that approximate theories for the structure of nonuniform hard sphere fluids can be generated by linear truncations of functional expansions of the nonuniform density rho(r) about that of an appropriately chosen uniform system. We consider the most general such truncation, which we refer to as the shifted linear response (SLR) equation, where the density response rho(r) to an external field phi(r) is expanded to linear order at each r about a different uniform system with a locally shifted chemical potential. Special cases include the Percus-Yevick (PY) approximation for nonuniform fluids, with no shift of the chemical potential, and the hydrostatic linear response (HLR) equation, where the chemical potential is shifted by the local value of phi(r). The HLR equation gives exact results for very slowly varying phi(r) and reduces to the PY approximation for hard core phi(r), where generally accurate results are found. We show that a truncated expansion about the bulk density (the PY approximation) also gives exact results for localized fields that are nonzero only in a "tiny" region whose volume V(phi) can accommodate at most one particle. The SLR equation can also exactly describe a limit where the fluid is confined by hard walls to a very narrow slit. This limit can be related to the localized field limit by a simple shift of the chemical potential, leading to an expansion about the ideal gas. We then try to develop a systematic way of choosing an optimal local shift in the SLR equation for general phi(r) by requiring that the predicted rho(r) is insensitive to small variations about the appropriate local shift, a property that the exact expansion to all orders would obey. The resulting insensitivity criterion (IC) gives a theory that reduces to the HLR equation for slowly varying phi(r) and is much more accurate than HLR both for very narrow slits, where the IC agrees with exact results, and for fields confined to "tiny" regions, where the IC gives very accurate (but not exact) results. However, the IC is significantly less accurate than the PY and HLR equations for single hard core fields. Only a small change in the predicted reference density is needed to correct this remaining limit.

Journal Article↗

Connecting local structure to interface formation: a molecular scale van der Waals theory of nonuniform liquids.

This article reviews a new and general theory of nonuniform fluids that naturally incorporates molecular scale information into the classical van der Waals theory of slowly varying interfaces. The method optimally combines two standard approximations, molecular (mean) field theory to describe interface formation and linear response (or Gaussian fluctuation) theory to describe local structure. Accurate results have been found in many different applications in nonuniform simple fluids and these ideas may have important implications for the theory of hydrophobic interactions in water.

Binding Sites↗