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John E McGrady

Publications and source records attributed to John E McGrady.

At least 19 recordsLinked to original sources
PubMed2006

Experimental and theoretical investigations of new dinuclear palladium complexes as precatalysts for the amination of aryl chlorides.

A series of new palladium dinuclear species with general formula [Pd2X(mu-X)[mu-P(t)Bu2(Bph-R)]] (X = Cl, Br; Bph = biphenyl; R = H, Me, NMe2) have been prepared. The two palladium centers in these species are bridged by one of the aromatic rings of the biphenyl group present in the corresponding phosphine. The X-ray crystal structure of one of these complexes has been obtained, providing a clear picture of the bonding pattern. The stability of these dimers in solution is shown to be highly dependent on the nature of the phosphine R group and also on the bridging halide. When R = NMe2, the dimers dissociate, yielding the palladium(II) compounds PdX2[P(t)Bu2(BPh-NMe2)] (X = Cl, Br), and the X-ray crystal structure of one of them (X = Br) has shown that the biphenyl group from the phosphine interacts directly with the metal center. This interaction seems to play an important role in stabilizing the otherwise coordinatively unsaturated palladium(II) complex. In contrast, when R = H or Me, the analogous monomeric palladium(II) complexes are unstable and undergo cyclometalation to generate a palladium(II) dinuclear species in which each of the two phosphines cyclometalates with the palladium centers forming a strained four-membered ring. In addition to their unusual structures, these aryl-bridged dimers have also proven to be excellent precatalysts for the amination of aryl chlorides. To rationalize some of the experimental results, a detailed DFT computational study has been carried out and is presented herein.

Journal Article↗
PubMed2006

A three-state model for the polymorphism in linear tricobalt compounds.

The remarkable polymorphism exhibited by the linear tricobalt compounds, Co3(mu3-dpa)4Cl2 and Co3(mu3-dpa)4Br2, can be explained using a model involving three distinct electronic states. At high temperatures, symmetric and unsymmetric forms arise from the population of doublet (2A) and quartet (4B) states, respectively, the latter containing a localized high-spin Co(II) center. In the unsymmetric form, a reduction in temperature leads to a spin-crossover to a second quite distinct doublet state, 2B, where, uniquely, the d(x2-y2) character on the localized Co(II) center is distributed between the occupied and vacant manifolds. The variable population of the Co d(x2-y2) orbital gives rise to the continuous change in Co-Co and Co-N bond lengths as the temperature is decreased.

Journal Article↗
PubMed2006

Structure and bonding in a cyclobutyl tris(pyrazolyl)boratoniobium complex and the variation in agostic behaviour with ring size in the series Tp(Me2)NbCl(c-C(n)H(2n-1))(MeC[triple bond]CMe), n = 3-6.

The synthesis and characterisation of the cyclobutyl complex Tp(Me2)NbCl(c-C4H7)(MeC[triple bond]CMe) completes the family of cycloalkyl complexes Tp(Me2)NbCl(c-C(n)H(2n-1)), n = 3-6. The properties of the cyclobutyl complex are qualitatively similar to those of its cyclopentyl and cyclohexyl analogues, and dramatically different from those of the cyclopropyl derivative. Most conspicuously, the cyclobutyl system has an alpha-C-H agostic interaction in the dominant isomer, with no evidence for the alpha-C-C agostic character found for the smaller ring. C-C agostic character therefore seems to be unique to the cyclopropyl complex, where the acute C-C-C angles destabilise the C-C bonding orbitals.

Journal Article↗
PubMed2006

Cationic phosphorus-carbon-pnictogen cages isolobal to [C5R5]+.

The cationic cages nido-[C2Bu(t)2P2E]+ (E = As, Sb), which are isolobal to the cyclopentadienyl cation, adopt square based pyramidal structures with the heavy pnictogen atom at the apex; NMR and computational methods have been used to probe the dynamic behaviour of the complexes.

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PubMed2006

Contrasting photochemical and thermal reactivity of Ru(CO)2(PPh3)(dppe) towards hydrogen rationalised by parahydrogen NMR and DFT studies.

The synthesis, characterisation and thermal and photochemical reactivity of Ru(CO)2(PPh3)(dppe) 1 towards hydrogen are described. Compound proved to exist in both fac (major) and mer forms in solution. Under thermal conditions, PPh3 is lost from 1 in the major reaction pathway and the known complex Ru(CO)2(dppe)(H)2 2 is formed. Photochemically, CO loss is the dominant process, leading to the alternative dihydride Ru(CO)(PPh3)(dppe)(H)2 3. The major isomer of 3, viz. 3a, contains hydride ligands that are trans to CO and trans to one of the phosphorus atoms of the dppe ligand but a second isomer, 3b, where both hydride ligands are trans to distinct phosphines, is also formed. On the NMR timescale, no interconversion of 3a and 3b was observed, although hydride site interchange is evident with activation parameters of DeltaH(double dagger) = 95 +/- 6 kJ mol(-1) and DeltaS(double dagger) = 26 +/- 17 J K(-1) mol(-1). Density functional theory confirms that the observed species are the most stable isomeric forms, and suggests that hydride exchange occurs via a transition state featuring an eta2-coordinated H2 unit.

Journal Article↗
PubMed2005

Catalytic alcohol oxidation by an unsymmetrical 5-coordinate copper complex: electronic structure and mechanism.

Density functional theory reveals the detailed mechanism of alcohol oxidation by a model copper complex, Cu(II)L, L = cis-1-(3',5'-dimethoxy-benzylideneamino)-3,5-[2-hydroxy-(3',5'-di-tert-butyl)benzylideneimino]cyclohexane. Despite the obvious structural and functional parallels between the title compound and the enzyme galactose oxidase, the details of the catalytic pathway are fundamentally different. In the enzyme, coordination of the substrate produces an active form containing a Cu(II) centre and a tyrosyl radical, the latter being responsible for the abstraction of hydrogen from the substrate. In the model system, in marked contrast, the active form contains a Cu(II) centre, but the ligand radical character is localised on the substrate (alcoholate) oxygen, rather than the phenolate ligand. The result is a significantly higher barrier to hydrogen-atom abstraction compared to the enzyme itself. The origin of these significant differences is traced to the rigid nature of the pentadentate ligand, which resists changes in coordination number during the catalytic cycle.

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PubMed2005

First structural characterization of a delocalized, mixed-valent, triangular Cu37+ species: chemical and electrochemical oxidation of a CuII3(mu3-O) pyrazolate and electronic structure of the oxidation product.

The chemical or electrochemical one-electron oxidation of the all-CuII complex [Cu3(mu3-O)(mu-pz)3X3]2- leads to its formally CuII2CuIII analogue (pz = pyrazolato anion; X = Cl- and PhCOO-). The X-ray single-crystal structure and density functional theory analysis of the latter agree in revealing the delocalized nature of its mixed-valent Cu3(7+) core.

Copper↗
PubMed2004

An electronic perspective on the reduction of an n=n double bond at a conserved dimolybdenum core.

Density functional theory has been used to assess the role of the bimetallic core in supporting reductive cleavage of the N=N double bond in [Cp2Mo2(mu-SMe)3(mu-eta1:eta1-HN=NPh)]+. The HOMO of the complex, the Mo-Mo delta orbital, plays a key role as a source of high-energy electrons, available for transfer into the vacant orbitals of the N=N unit. As a result, the metal centres cycle between the Mo(III) and Mo(IV) oxidation states. The symmetry of the Mo-Mo delta "buffer" orbital has a profound influence on the reaction pathway, because significant overlap with the redox-active orbital on the N=N unit (pi* or sigma*) is required for efficient electron transfer. The orthogonality of the Mo-Mo delta and N-N sigma* orbitals in the eta1:eta1 coordination mode ensures that electron transfer into the N-N sigma bond is effectively blocked, and a rate-limiting eta1:eta1-->eta1 rearrangement is a necessary precursor to cleavage of the bond.

Electrochemistry↗
PubMed2004

Structure and bonding in the isoelectronic series CnHnP5-n+: is phosphorus a carbon copy?

The relative stabilities of different isomers of the isoelectronic series C(n)H(n)P(5-n)(+) have been investigated using G3X theory. The results indicate that all species containing one or more phosphorus atom adopt a three-dimensional nido geometry, in marked contrast to the planar structure favoured by the all-carbon analogue. Within isomeric nido clusters, a strong correlation between total energy and the nucleus-independent chemical shift (NICS) indicates that three-dimensional aromaticity plays a significant role in determining the stability of the cluster. In the context of these nido clusters, the extent to which phosphorus is a carbon copy proves to be highly dependent on the global electronic environment. The first isolobal substitution of CH by P causes a complete switch from localised to delocalised bonding, accompanied by a transition from a two- to a three-dimensional structure, with the phosphorus atom showing a strong preference for the unique apical site. In contrast, further increasing the phosphorus content causes no further change in structure or bonding, suggesting that, at the basal sites, phosphorus is a rather better carbon copy. The low-energy pathways for interconversion of apical and basal atoms previously identified in C(2)H(2)P(3)(+) prove to be a general feature of all members of the series.

Journal Article↗
PubMed2004

A comparison of C-F and C-H bond activation by zerovalent ni and pt: a density functional study.

Density functional theory indicates that oxidative addition of the C-F and C-H bonds in C6F6 and C6H6 at zerovalent nickel and platinum fragments, M(H2PCH2CH2PH2), proceeds via initial exothermic formation of an eta2-coordinated arene complex. Two distinct transition states have been located on the potential energy surface between the eta2-coordinated arene and the oxidative addition product. The first, at relatively low energy, features an eta3-coordinated arene and connects two identical eta2-arene minima, while the second leads to cleavage of the C-X bond. The absence of intermediate C-F or C-H sigma complexes observed in other systems is traced to the ability of the 14-electron metal fragment to accommodate the eta3-coordination mode in the first transition state. Oxidative addition of the C-F bond is exothermic at both nickel and platinum, but the barrier is significantly higher for the heavier element as a result of strong 5dpi-ppi repulsions in the transition state. Similar repulsive interactions lead to a relatively long Pt-F bond with a lower stretching frequency in the oxidative addition product. Activation of the C-H bond is, in contrast, exothermic only for the platinum complex. We conclude that the nickel system is better suited to selective C-F bond activation than its platinum analogue for two reasons: the strong thermodynamic preference for C-F over C-H bond activation and the relatively low kinetic barrier.

Journal Article↗
PubMed2003

On the nature of the bonding in 1:1 adducts of O2.

A survey of the potential energy surface for a 1:1 copper dioxygen complex, (C(3)N(2)H(5))CuO(2), reveals two distinct states in the valence region, a singlet ((1)A(1)) and a triplet ((3)B(1)). The former spans a continuum from Cu(III)-O(2)(2-) to Cu(I)-O(2)((1)Delta(g)), while the latter spans Cu(II)-O(2)(1-) to Cu(I)-O(2)((3)Sigma(g)(-)). The point at which the potential energy curves for the two states cross marks an abrupt discontinuity in electron distribution, where the system shifts from dominant Cu(III)-O(2)(2-) character to Cu(II)-O(2)(1-). On this basis, we argue that there is no continuum between Cu(III)-peroxide and Cu(II)-superoxide: the two are represented by distinct states that differ both in symmetry and multiplicity.

Journal Article↗
PubMed2003

On the electronic origins of structural isomerism in the iron-sulfur cubane, [(C(5)H(5))(4)Fe(4)S(4)](2+).

Density functional theory provides new insights into the structural isomerism observed in the cyclopentadienyl-capped iron-sulfur cluster, [(C(5)H(5))(4)Fe(4)S(4)](2+). Two distinct, closely spaced minima have been located, a triplet with D(2) symmetry and a C(2)-symmetric singlet, both of which correspond closely to the structure of one of the known crystal forms of the cation. Thus, the structural diversity in these species reflects genuine molecular bistability rather than simple solid-state packing effects. In contrast, no stable D(2)(d)()-symmetric minimum has been located, suggesting that the reported D(2)(d)() symmetry of the cation in [(C(5)H(5))(4)Fe(4)S(4)][PF(6)](2) may be a crystallographic artifact. In the ruthenium analogue, the more diffuse 4d orbitals stabilize the C(2)-symmetric singlet, which is unambiguously the ground state, but the D(2)-symmetric potential energy surface provides a viable low-energy pathway for the dynamic exchange of the Ru-Ru bonds.

Journal Article↗
PubMed2002

Metal-benzene and metal-CO bond energies in neutral and ionic C6H6Cr(CO)3 studied by threshold photoelectron-photoion coincidence spectroscopy and density functional theory.

photoelectron-photoion coincidence spectroscopy and density functional theory calculations have been used to investigate the dissociation kinetics of the benzene chromium tricarbonyl ion, BzCr(CO)3+ (Bz = C6H6). The dissociation of the BzCr(CO)3+ ion proceeds by the sequential loss of three CO and benzene ligands. The first and third CO and the benzene loss reactions were associated with metastable precursor ions (lifetimes in the microsecond range). By simulating the resulting asymmetric time-of-flight peak shapes and breakdown diagram, the 0 K appearance energies of the four product ions were determined to be 8.33 +/- 0.05, 8.93 +/- 0.05, 9.97 +/- 0.06, and 11.71 +/- 0.06 eV, respectively. Combined with the ionization energy of BzCr(CO)3, 7.30 +/- 0.05 eV, the three successive Cr-CO bond energies in the BzCr(CO)3+ were found to alternate, with values of 1.03 +/- 0.05, 0.60 +/- 0.05, and 1.04 +/- 0.05 eV, respectively, and the Bz-Cr bond energy in BzCr+ is 1.74 +/- 0.05 eV, a trend confirmed by the density functional theory (DFT) calculations. Using the heats of formation of the fully dissociated products, C6H6, Cr+, and CO, the 298 K heats of formation the ionic BzCr(CO)n+ (n = 03) species were determined. By scaling the DFT calculated bond energies for the neutral molecules, the heats of formation of the neutral BzCr(CO)n (n = 03) were also obtained.

Journal Article↗
PubMed2002

A density functional study of oxygen activation by unsaturated complexes [M(bipy)(2)](2+), M = Cr and Fe.

Density functional theory is used to probe the reaction of O(2) with the unsaturated transition-metal fragments [M(bipy)(2)](2+), M = Cr, Fe. In both cases, calculations indicate that the O(2) molecule is initially trapped as an eta(2)-bound superoxide ion, where the unpaired electron in the out-of-plane pi orbital of O(2) is weakly coupled to those on the trivalent metal ion. In the chromium case, a cis-dioxo Cr(VI) complex is found to be significantly more stable than the superoxo species. The two minima are, however, separated by a large barrier, along with a change in spin state. For the iron analogue, the relative energies of the two minima are reversed, the superoxo complex being the global minimum. The energetics of the O(2) activation processes are consistent with previously reported mass spectrometric experiments, where an adduct, [M(bipy)(2)(O(2))](2+), was detected only for chromium.

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