Biomedical subjects

Jonathan E Rowe

Publications and source records attributed to Jonathan E Rowe.

6 recordsLinked to original sources

PubMed2006

Markov models of integrating spheres for hyperspectral imaging.

Theoretical models of the signal detected by a CCD camera during hyperspectral imaging with an integrating sphere are derived using Markov chains with absorbing states. The models provide analytical expressions that describe the real reflectance of the sample as a function of the detected signal at each pixel of the image. Validation of the models was done by using reflectance standards and tissue phantoms. The models provide accurate analytical solutions for samples and spheres that are near-Lambertian reflectors.

Journal Article↗

PubMed2005

State aggregation and population dynamics in linear systems.

We consider complex systems that are composed of many interacting elements, evolving under some dynamics. We are interested in characterizing the ways in which these elements may be grouped into higher-level, macroscopic states in a way that is compatible with those dynamics. Such groupings may then be thought of as naturally emergent properties of the system. We formalize this idea and, in the case that the dynamics are linear, prove necessary and sufficient conditions for this to happen. In cases where there is an underlying symmetry among the components of the system, group theory may be used to provide a strong sufficient condition. These observations are illustrated with some artificial life examples.

Animals↗

PubMed2004

Structural search spaces and genetic operators.

In a previous paper (Rowe et al., 2002), aspects of the theory of genetic algorithms were generalised to the case where the search space, omega, had an arbitrary group action defined on it. Conditions under which genetic operators respect certain subsets of omega were identified, leading to a generalisation of the term schema. In this paper, search space groups with more detailed structure are examined. We define the class of structural crossover operators that respect certain schemata in these groups, which leads to a generalised schema theorem. Recent results concerning the Fourier (or Walsh) transform are generalised. In particular, it is shown that the matrix group representing omega can be simultaneously diagonalised if and only if omega is Abelian. Some results concerning structural crossover and mutation are given for this case.

Algorithms↗

PubMed2003

Kin selection may inhibit the evolution of reciprocation.

Kin selection and reciprocal cooperation provide two candidate explanations for the evolution of cooperation. Models of the evolution of cooperation have typically focussed on one or the other mechanism, despite claims that kin selection could pave the way for the evolution of reciprocal cooperation. We describe a computer simulation model that explicitly supports both kin selection and reciprocal cooperation. The model simulates a viscous population of discrete individuals with social interaction taking the form of the Prisoner's Dilemma and selection acting on performance in these interactions. We recount how the analytical and empirical study of this model led to the conclusion that kin selection may actually inhibit the evolution of effective strategies for establishing reciprocal cooperation.

Altruism↗

PubMed2003

Viscous populations and their support for reciprocal cooperation.

Viscous populations (those whose members are spatially distributed and have limited mobility and locality of interaction and mating) have been proposed to support the evolution of reciprocal cooperation among self-interested individuals. Here we present a model of such a population and describe how its examination yielded the realization that different classes of viscous populations exist with differing levels of support for reciprocal cooperation. Specifically we find from our model that, in a spatially distributed population with increased viscosity, the reciprocally cooperative tit-for-tat strategy may not be globally stable due to a corresponding increase in local population density.

Cooperative Behavior↗

PubMed2002

Group properties of crossover and mutation.

It is supposed that the finite search space omega has certain symmetries that can be described in terms of a group of permutations acting upon it. If crossover and mutation respect these symmetries, then these operators can be described in terms of a mixing matrix and a group of permutation matrices. Conditions under which certain subsets of omega are invariant under crossover are investigated, leading to a generalization of the term schema. Finally, it is sometimes possible for the group acting on omega to induce a group structure on omega itself.

Adult↗